BLASTX nr result
ID: Catharanthus22_contig00001772
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00001772
(342 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006364981.1| PREDICTED: serine hydroxymethyltransferase, ... 72 6e-11
ref|XP_004287403.1| PREDICTED: serine hydroxymethyltransferase, ... 72 1e-10
ref|XP_003635097.1| PREDICTED: serine hydroxymethyltransferase, ... 71 2e-10
emb|CBI25706.3| unnamed protein product [Vitis vinifera] 71 2e-10
ref|XP_002262872.2| PREDICTED: serine hydroxymethyltransferase, ... 71 2e-10
gb|EMJ26918.1| hypothetical protein PRUPE_ppa004304mg [Prunus pe... 70 2e-10
emb|CBI19306.3| unnamed protein product [Vitis vinifera] 70 2e-10
ref|XP_002285605.1| PREDICTED: serine hydroxymethyltransferase, ... 70 2e-10
ref|XP_004512553.1| PREDICTED: serine hydroxymethyltransferase, ... 69 8e-10
ref|XP_004238029.1| PREDICTED: serine hydroxymethyltransferase, ... 68 1e-09
gb|AGW24497.1| serine hydroxymethyltransferase, mitochondrial, p... 68 1e-09
ref|XP_006466352.1| PREDICTED: serine hydroxymethyltransferase, ... 67 2e-09
ref|XP_006466351.1| PREDICTED: serine hydroxymethyltransferase, ... 67 2e-09
ref|XP_006426224.1| hypothetical protein CICLE_v10025372mg [Citr... 67 2e-09
ref|XP_006426223.1| hypothetical protein CICLE_v10025372mg [Citr... 67 2e-09
ref|XP_004148411.1| PREDICTED: serine hydroxymethyltransferase, ... 67 2e-09
ref|XP_002272058.2| PREDICTED: LOW QUALITY PROTEIN: serine hydro... 67 3e-09
emb|CBI25702.3| unnamed protein product [Vitis vinifera] 67 3e-09
ref|XP_002271676.2| PREDICTED: serine hydroxymethyltransferase, ... 67 3e-09
gb|ACJ85724.1| unknown [Medicago truncatula] 67 3e-09
>ref|XP_006364981.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Solanum tuberosum]
Length = 519
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/62 (58%), Positives = 43/62 (69%)
Frame = -2
Query: 191 VYHMSSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENF 12
V++MSS+ NQA+R +E+ R+TWIKQLNA EKARQWKG ELIPSENF
Sbjct: 28 VHYMSSLPNQAVRNREDPRVTWIKQLNAPLEEIDPEIADIIELEKARQWKGLELIPSENF 87
Query: 11 TS 6
TS
Sbjct: 88 TS 89
>ref|XP_004287403.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 525
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/62 (58%), Positives = 41/62 (66%)
Frame = -2
Query: 191 VYHMSSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENF 12
VYHMS +++QA +EKE +R TWIKQLN EKARQWKG ELIPSENF
Sbjct: 25 VYHMSGLSSQAAQEKEQARATWIKQLNEPLEVIDPEINDIIELEKARQWKGLELIPSENF 84
Query: 11 TS 6
TS
Sbjct: 85 TS 86
>ref|XP_003635097.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Vitis vinifera]
Length = 224
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/62 (56%), Positives = 42/62 (67%)
Frame = -2
Query: 191 VYHMSSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENF 12
+Y+M+S+ N+A+ EKE SR+TW KQLNA EKARQWKG ELIPSENF
Sbjct: 27 IYYMASLPNEAVYEKEKSRVTWPKQLNAPLGVVDPEIADIIELEKARQWKGLELIPSENF 86
Query: 11 TS 6
TS
Sbjct: 87 TS 88
>emb|CBI25706.3| unnamed protein product [Vitis vinifera]
Length = 236
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/62 (56%), Positives = 42/62 (67%)
Frame = -2
Query: 191 VYHMSSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENF 12
+Y+M+S+ N+A+ EKE SR+TW KQLNA EKARQWKG ELIPSENF
Sbjct: 27 IYYMASLPNEAVYEKEKSRVTWPKQLNAPLGVVDPEIADIIELEKARQWKGLELIPSENF 86
Query: 11 TS 6
TS
Sbjct: 87 TS 88
>ref|XP_002262872.2| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Vitis vinifera] gi|297736687|emb|CBI25704.3| unnamed
protein product [Vitis vinifera]
Length = 518
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/62 (56%), Positives = 42/62 (67%)
Frame = -2
Query: 191 VYHMSSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENF 12
+Y+M+S+ N+A+ EKE SR+TW KQLNA EKARQWKG ELIPSENF
Sbjct: 27 IYYMASLPNEAVYEKEKSRVTWPKQLNAPLGVVDPEIADIIELEKARQWKGLELIPSENF 86
Query: 11 TS 6
TS
Sbjct: 87 TS 88
>gb|EMJ26918.1| hypothetical protein PRUPE_ppa004304mg [Prunus persica]
Length = 517
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/62 (54%), Positives = 42/62 (67%)
Frame = -2
Query: 191 VYHMSSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENF 12
+YHMSS+++QA ++KE +R TWIKQLN EK+RQWKG ELIPSENF
Sbjct: 26 IYHMSSLSSQAAQDKEKARATWIKQLNEPLEVVDPEISNIIELEKSRQWKGLELIPSENF 85
Query: 11 TS 6
TS
Sbjct: 86 TS 87
>emb|CBI19306.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/62 (58%), Positives = 41/62 (66%)
Frame = -2
Query: 191 VYHMSSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENF 12
+Y+MSS+ N+ + EKE SRITW KQLNA EKARQWKG ELIPSENF
Sbjct: 23 LYYMSSLPNEVVCEKEKSRITWTKQLNAPLEVVDPEIADIIELEKARQWKGLELIPSENF 82
Query: 11 TS 6
TS
Sbjct: 83 TS 84
>ref|XP_002285605.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial [Vitis
vinifera]
Length = 516
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/62 (58%), Positives = 41/62 (66%)
Frame = -2
Query: 191 VYHMSSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENF 12
+Y+MSS+ N+ + EKE SRITW KQLNA EKARQWKG ELIPSENF
Sbjct: 25 LYYMSSLPNEVVCEKEKSRITWTKQLNAPLEVVDPEIADIIELEKARQWKGLELIPSENF 84
Query: 11 TS 6
TS
Sbjct: 85 TS 86
>ref|XP_004512553.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
isoform X1 [Cicer arietinum]
gi|502162599|ref|XP_004512554.1| PREDICTED: serine
hydroxymethyltransferase, mitochondrial-like isoform X2
[Cicer arietinum]
Length = 519
Score = 68.6 bits (166), Expect = 8e-10
Identities = 34/62 (54%), Positives = 42/62 (67%)
Frame = -2
Query: 191 VYHMSSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENF 12
VY+ SS+ ++A+ +KENSR+TW KQLN+ EKARQWKG ELIPSENF
Sbjct: 28 VYYKSSLPDEAIYDKENSRVTWPKQLNSPLEVVDPEIADIIELEKARQWKGLELIPSENF 87
Query: 11 TS 6
TS
Sbjct: 88 TS 89
>ref|XP_004238029.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Solanum lycopersicum]
Length = 519
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/58 (58%), Positives = 40/58 (68%)
Frame = -2
Query: 179 SSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENFTS 6
SS+ NQA+R++E+ R+TWIKQLNA EKARQWKG ELIPSENFTS
Sbjct: 32 SSLPNQAVRDREDPRVTWIKQLNAPLEEIDPEIADIIEHEKARQWKGLELIPSENFTS 89
>gb|AGW24497.1| serine hydroxymethyltransferase, mitochondrial, partial [Avicennia
marina var. marina]
Length = 98
Score = 67.8 bits (164), Expect = 1e-09
Identities = 35/59 (59%), Positives = 39/59 (66%)
Frame = -2
Query: 182 MSSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENFTS 6
MSS ANQA+ EK+ SR+TW KQLN+ EKARQWKG ELIPSENFTS
Sbjct: 10 MSSFANQAVSEKDASRVTWTKQLNSPLEEVDPEIADIIELEKARQWKGLELIPSENFTS 68
>ref|XP_006466352.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Citrus sinensis]
Length = 515
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/62 (54%), Positives = 41/62 (66%)
Frame = -2
Query: 191 VYHMSSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENF 12
+Y+MSS+ N+A+ EKE + +TW KQLNA EKARQWKG ELIPSENF
Sbjct: 25 LYYMSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF 84
Query: 11 TS 6
TS
Sbjct: 85 TS 86
>ref|XP_006466351.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Citrus sinensis]
Length = 515
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/62 (54%), Positives = 41/62 (66%)
Frame = -2
Query: 191 VYHMSSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENF 12
+Y+MSS+ N+A+ EKE + +TW KQLNA EKARQWKG ELIPSENF
Sbjct: 25 LYYMSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF 84
Query: 11 TS 6
TS
Sbjct: 85 TS 86
>ref|XP_006426224.1| hypothetical protein CICLE_v10025372mg [Citrus clementina]
gi|557528214|gb|ESR39464.1| hypothetical protein
CICLE_v10025372mg [Citrus clementina]
Length = 477
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/62 (54%), Positives = 41/62 (66%)
Frame = -2
Query: 191 VYHMSSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENF 12
+Y+MSS+ N+A+ EKE + +TW KQLNA EKARQWKG ELIPSENF
Sbjct: 27 LYYMSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF 86
Query: 11 TS 6
TS
Sbjct: 87 TS 88
>ref|XP_006426223.1| hypothetical protein CICLE_v10025372mg [Citrus clementina]
gi|567867205|ref|XP_006426225.1| hypothetical protein
CICLE_v10025372mg [Citrus clementina]
gi|557528213|gb|ESR39463.1| hypothetical protein
CICLE_v10025372mg [Citrus clementina]
gi|557528215|gb|ESR39465.1| hypothetical protein
CICLE_v10025372mg [Citrus clementina]
Length = 517
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/62 (54%), Positives = 41/62 (66%)
Frame = -2
Query: 191 VYHMSSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENF 12
+Y+MSS+ N+A+ EKE + +TW KQLNA EKARQWKG ELIPSENF
Sbjct: 27 LYYMSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF 86
Query: 11 TS 6
TS
Sbjct: 87 TS 88
>ref|XP_004148411.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Cucumis sativus] gi|449523215|ref|XP_004168619.1|
PREDICTED: serine hydroxymethyltransferase,
mitochondrial-like [Cucumis sativus]
Length = 516
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = -2
Query: 191 VYHMSSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENF 12
++ MSS++ A E+E +R TWI+QLNA EKARQWKGFELIPSENF
Sbjct: 25 LHRMSSLSGAAAEEREKARATWIQQLNAPLEVIDPEIADIIELEKARQWKGFELIPSENF 84
Query: 11 TSS 3
TSS
Sbjct: 85 TSS 87
>ref|XP_002272058.2| PREDICTED: LOW QUALITY PROTEIN: serine hydroxymethyltransferase,
mitochondrial-like [Vitis vinifera]
Length = 518
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/62 (51%), Positives = 41/62 (66%)
Frame = -2
Query: 191 VYHMSSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENF 12
+Y+M+S+ N+A+ E+E SR+TW KQLNA EKARQWK EL+PSENF
Sbjct: 27 IYYMASLPNEAVYEEEKSRVTWPKQLNAPLGVVDPEIADIIELEKARQWKALELVPSENF 86
Query: 11 TS 6
TS
Sbjct: 87 TS 88
>emb|CBI25702.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/62 (51%), Positives = 41/62 (66%)
Frame = -2
Query: 191 VYHMSSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENF 12
+Y+M+S+ N+A+ E+E SR+TW KQLNA EKARQWK EL+PSENF
Sbjct: 27 IYYMASLPNEAVYEEEKSRVTWPKQLNAPLGVVDPEIADIIELEKARQWKALELVPSENF 86
Query: 11 TS 6
TS
Sbjct: 87 TS 88
>ref|XP_002271676.2| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Vitis vinifera] gi|297736682|emb|CBI25699.3| unnamed
protein product [Vitis vinifera]
Length = 518
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/62 (51%), Positives = 41/62 (66%)
Frame = -2
Query: 191 VYHMSSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENF 12
+Y+M+S+ N+A+ E+E SR+TW KQLNA EKARQWK EL+PSENF
Sbjct: 27 IYYMASLPNEAVYEEEKSRVTWPKQLNAPLGVVDPEIADIIELEKARQWKALELVPSENF 86
Query: 11 TS 6
TS
Sbjct: 87 TS 88
>gb|ACJ85724.1| unknown [Medicago truncatula]
Length = 177
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/62 (53%), Positives = 42/62 (67%)
Frame = -2
Query: 191 VYHMSSVANQALREKENSRITWIKQLNAXXXXXXXXXXXXXXXEKARQWKGFELIPSENF 12
VY+ SS+ ++A+ +KENSR++W KQLN+ EKARQWKG ELIPSENF
Sbjct: 27 VYYKSSLPDEAVYDKENSRVSWPKQLNSSLEEIDPEIADIIELEKARQWKGLELIPSENF 86
Query: 11 TS 6
TS
Sbjct: 87 TS 88