BLASTX nr result

ID: Catharanthus22_contig00001722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00001722
         (884 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding prote...   172   2e-40
gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Cath...   167   4e-39
gb|AAF31404.1|AF200323_1 putative glycine-rich RNA-binding prote...   165   2e-38
gb|EPS70351.1| hypothetical protein M569_04412, partial [Genlise...   162   2e-37
ref|XP_004230948.1| PREDICTED: glycine-rich RNA-binding protein-...   161   3e-37
ref|XP_004230947.1| PREDICTED: glycine-rich RNA-binding protein-...   161   3e-37
ref|XP_004230946.1| PREDICTED: glycine-rich RNA-binding protein-...   161   3e-37
ref|XP_004230945.1| PREDICTED: glycine-rich RNA-binding protein-...   161   3e-37
ref|XP_004230944.1| PREDICTED: glycine-rich RNA-binding protein-...   161   3e-37
ref|XP_004230943.1| PREDICTED: glycine-rich RNA-binding protein-...   161   3e-37
dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]      161   3e-37
ref|XP_006365107.1| PREDICTED: glycine-rich RNA-binding protein ...   160   6e-37
ref|XP_006365106.1| PREDICTED: glycine-rich RNA-binding protein ...   160   6e-37
gb|EPS66737.1| hypothetical protein M569_08040 [Genlisea aurea]       160   8e-37
ref|XP_006487137.1| PREDICTED: glycine-rich RNA-binding protein-...   158   3e-36
gb|EOX98019.1| Glycine-rich RNA-binding protein 7 [Theobroma cacao]   158   3e-36
gb|ABB87126.1| putative glycine-rich RNA binding protein-like [S...   158   3e-36
gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]              157   6e-36
emb|CBI32594.3| unnamed protein product [Vitis vinifera]              156   8e-36
ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein ...   156   8e-36

>gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
          Length = 164

 Score =  172 bits (435), Expect = 2e-40
 Identities = 84/86 (97%), Positives = 86/86 (100%)
 Frame = -2

Query: 670 MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQ 491
           MASADVE+RCFVGGLAWATTDQSLSEAFSQYGE+LESKIINDRETGRSRGFGFVTFKDEQ
Sbjct: 1   MASADVEYRCFVGGLAWATTDQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQ 60

Query: 490 SMRDAIEGMNGQTLDGRNITVNEAQS 413
           SMRDAIEGMNGQTLDGRNITVNEAQS
Sbjct: 61  SMRDAIEGMNGQTLDGRNITVNEAQS 86


>gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Catharanthus roseus]
          Length = 137

 Score =  167 bits (424), Expect = 4e-39
 Identities = 82/86 (95%), Positives = 85/86 (98%)
 Frame = -2

Query: 670 MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQ 491
           MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTF DE+
Sbjct: 1   MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEK 60

Query: 490 SMRDAIEGMNGQTLDGRNITVNEAQS 413
           SM+DAIEGMNGQTLDGRN+TVNEAQS
Sbjct: 61  SMKDAIEGMNGQTLDGRNVTVNEAQS 86


>gb|AAF31404.1|AF200323_1 putative glycine-rich RNA-binding protein 2 [Catharanthus roseus]
          Length = 160

 Score =  165 bits (417), Expect = 2e-38
 Identities = 81/86 (94%), Positives = 84/86 (97%)
 Frame = -2

Query: 670 MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQ 491
           MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESK+INDRETGRSRGFGFVTF DE+
Sbjct: 1   MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKVINDRETGRSRGFGFVTFGDEK 60

Query: 490 SMRDAIEGMNGQTLDGRNITVNEAQS 413
           SM+DAI GMNGQTLDGRNITVNEAQS
Sbjct: 61  SMKDAIVGMNGQTLDGRNITVNEAQS 86


>gb|EPS70351.1| hypothetical protein M569_04412, partial [Genlisea aurea]
          Length = 104

 Score =  162 bits (409), Expect = 2e-37
 Identities = 77/86 (89%), Positives = 84/86 (97%)
 Frame = -2

Query: 670 MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQ 491
           MA+ADVEFRCFVGGLAWATTDQSL +AF+QYG+V++SKIINDRETGRSRGFGFVTFKDEQ
Sbjct: 1   MAAADVEFRCFVGGLAWATTDQSLEQAFAQYGQVIDSKIINDRETGRSRGFGFVTFKDEQ 60

Query: 490 SMRDAIEGMNGQTLDGRNITVNEAQS 413
           SM+DAIEGMNGQ LDGRNITVNEAQS
Sbjct: 61  SMKDAIEGMNGQELDGRNITVNEAQS 86


>ref|XP_004230948.1| PREDICTED: glycine-rich RNA-binding protein-like isoform 6 [Solanum
           lycopersicum]
          Length = 152

 Score =  161 bits (408), Expect = 3e-37
 Identities = 78/83 (93%), Positives = 82/83 (98%)
 Frame = -2

Query: 661 ADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQSMR 482
           ADVE+RCFVGGLAWATTDQ+LSEAFSQYGEV+ESKIINDRETGRSRGFGFVTFKDEQ+MR
Sbjct: 2   ADVEYRCFVGGLAWATTDQTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMR 61

Query: 481 DAIEGMNGQTLDGRNITVNEAQS 413
           DAIEGMNGQ LDGRNITVNEAQS
Sbjct: 62  DAIEGMNGQDLDGRNITVNEAQS 84


>ref|XP_004230947.1| PREDICTED: glycine-rich RNA-binding protein-like isoform 5 [Solanum
           lycopersicum]
          Length = 157

 Score =  161 bits (408), Expect = 3e-37
 Identities = 78/83 (93%), Positives = 82/83 (98%)
 Frame = -2

Query: 661 ADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQSMR 482
           ADVE+RCFVGGLAWATTDQ+LSEAFSQYGEV+ESKIINDRETGRSRGFGFVTFKDEQ+MR
Sbjct: 2   ADVEYRCFVGGLAWATTDQTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMR 61

Query: 481 DAIEGMNGQTLDGRNITVNEAQS 413
           DAIEGMNGQ LDGRNITVNEAQS
Sbjct: 62  DAIEGMNGQDLDGRNITVNEAQS 84


>ref|XP_004230946.1| PREDICTED: glycine-rich RNA-binding protein-like isoform 4 [Solanum
           lycopersicum]
          Length = 158

 Score =  161 bits (408), Expect = 3e-37
 Identities = 78/83 (93%), Positives = 82/83 (98%)
 Frame = -2

Query: 661 ADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQSMR 482
           ADVE+RCFVGGLAWATTDQ+LSEAFSQYGEV+ESKIINDRETGRSRGFGFVTFKDEQ+MR
Sbjct: 2   ADVEYRCFVGGLAWATTDQTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMR 61

Query: 481 DAIEGMNGQTLDGRNITVNEAQS 413
           DAIEGMNGQ LDGRNITVNEAQS
Sbjct: 62  DAIEGMNGQDLDGRNITVNEAQS 84


>ref|XP_004230945.1| PREDICTED: glycine-rich RNA-binding protein-like isoform 3 [Solanum
           lycopersicum]
          Length = 161

 Score =  161 bits (408), Expect = 3e-37
 Identities = 78/83 (93%), Positives = 82/83 (98%)
 Frame = -2

Query: 661 ADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQSMR 482
           ADVE+RCFVGGLAWATTDQ+LSEAFSQYGEV+ESKIINDRETGRSRGFGFVTFKDEQ+MR
Sbjct: 2   ADVEYRCFVGGLAWATTDQTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMR 61

Query: 481 DAIEGMNGQTLDGRNITVNEAQS 413
           DAIEGMNGQ LDGRNITVNEAQS
Sbjct: 62  DAIEGMNGQDLDGRNITVNEAQS 84


>ref|XP_004230944.1| PREDICTED: glycine-rich RNA-binding protein-like isoform 2 [Solanum
           lycopersicum]
          Length = 163

 Score =  161 bits (408), Expect = 3e-37
 Identities = 78/83 (93%), Positives = 82/83 (98%)
 Frame = -2

Query: 661 ADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQSMR 482
           ADVE+RCFVGGLAWATTDQ+LSEAFSQYGEV+ESKIINDRETGRSRGFGFVTFKDEQ+MR
Sbjct: 2   ADVEYRCFVGGLAWATTDQTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMR 61

Query: 481 DAIEGMNGQTLDGRNITVNEAQS 413
           DAIEGMNGQ LDGRNITVNEAQS
Sbjct: 62  DAIEGMNGQDLDGRNITVNEAQS 84


>ref|XP_004230943.1| PREDICTED: glycine-rich RNA-binding protein-like isoform 1 [Solanum
           lycopersicum]
          Length = 175

 Score =  161 bits (408), Expect = 3e-37
 Identities = 78/83 (93%), Positives = 82/83 (98%)
 Frame = -2

Query: 661 ADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQSMR 482
           ADVE+RCFVGGLAWATTDQ+LSEAFSQYGEV+ESKIINDRETGRSRGFGFVTFKDEQ+MR
Sbjct: 2   ADVEYRCFVGGLAWATTDQTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMR 61

Query: 481 DAIEGMNGQTLDGRNITVNEAQS 413
           DAIEGMNGQ LDGRNITVNEAQS
Sbjct: 62  DAIEGMNGQDLDGRNITVNEAQS 84


>dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
          Length = 167

 Score =  161 bits (407), Expect = 3e-37
 Identities = 78/86 (90%), Positives = 82/86 (95%)
 Frame = -2

Query: 670 MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQ 491
           MASADVEFRCFVGGLAWATTD SL EAFS YG++LESKIINDRETGRSRGFGFVTF+DE+
Sbjct: 1   MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEK 60

Query: 490 SMRDAIEGMNGQTLDGRNITVNEAQS 413
           SMRDAIEGMNGQ LDGRNITVNEAQS
Sbjct: 61  SMRDAIEGMNGQNLDGRNITVNEAQS 86


>ref|XP_006365107.1| PREDICTED: glycine-rich RNA-binding protein 7-like isoform X2
           [Solanum tuberosum]
          Length = 176

 Score =  160 bits (405), Expect = 6e-37
 Identities = 77/83 (92%), Positives = 82/83 (98%)
 Frame = -2

Query: 661 ADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQSMR 482
           ADVE+RCFVGGLAWATTDQ+LS+AFSQYGEV+ESKIINDRETGRSRGFGFVTFKDEQ+MR
Sbjct: 2   ADVEYRCFVGGLAWATTDQTLSDAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMR 61

Query: 481 DAIEGMNGQTLDGRNITVNEAQS 413
           DAIEGMNGQ LDGRNITVNEAQS
Sbjct: 62  DAIEGMNGQDLDGRNITVNEAQS 84


>ref|XP_006365106.1| PREDICTED: glycine-rich RNA-binding protein 7-like isoform X1
           [Solanum tuberosum]
          Length = 178

 Score =  160 bits (405), Expect = 6e-37
 Identities = 77/83 (92%), Positives = 82/83 (98%)
 Frame = -2

Query: 661 ADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQSMR 482
           ADVE+RCFVGGLAWATTDQ+LS+AFSQYGEV+ESKIINDRETGRSRGFGFVTFKDEQ+MR
Sbjct: 2   ADVEYRCFVGGLAWATTDQTLSDAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMR 61

Query: 481 DAIEGMNGQTLDGRNITVNEAQS 413
           DAIEGMNGQ LDGRNITVNEAQS
Sbjct: 62  DAIEGMNGQDLDGRNITVNEAQS 84


>gb|EPS66737.1| hypothetical protein M569_08040 [Genlisea aurea]
          Length = 169

 Score =  160 bits (404), Expect = 8e-37
 Identities = 75/86 (87%), Positives = 84/86 (97%)
 Frame = -2

Query: 670 MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQ 491
           MASA++E+RCFVGGLAWATTDQSL +AFS++GEV+ESK+INDRETGRSRGFGFVTFKDEQ
Sbjct: 1   MASAEIEYRCFVGGLAWATTDQSLEDAFSRFGEVIESKVINDRETGRSRGFGFVTFKDEQ 60

Query: 490 SMRDAIEGMNGQTLDGRNITVNEAQS 413
           SMRDAI+GMNGQ LDGRNITVNEAQS
Sbjct: 61  SMRDAIDGMNGQELDGRNITVNEAQS 86


>ref|XP_006487137.1| PREDICTED: glycine-rich RNA-binding protein-like [Citrus sinensis]
          Length = 168

 Score =  158 bits (399), Expect = 3e-36
 Identities = 76/86 (88%), Positives = 80/86 (93%)
 Frame = -2

Query: 670 MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQ 491
           MAS DVEFRCFVGGLAWATTD SL EAF  YG++LESKIINDRETGRSRGFGFVTF+DE+
Sbjct: 1   MASGDVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEK 60

Query: 490 SMRDAIEGMNGQTLDGRNITVNEAQS 413
           SMRDAIEGMNGQ LDGRNITVNEAQS
Sbjct: 61  SMRDAIEGMNGQNLDGRNITVNEAQS 86


>gb|EOX98019.1| Glycine-rich RNA-binding protein 7 [Theobroma cacao]
          Length = 168

 Score =  158 bits (399), Expect = 3e-36
 Identities = 74/86 (86%), Positives = 83/86 (96%)
 Frame = -2

Query: 670 MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQ 491
           MASAD+EFRCFVGGLAWAT D++L +AFSQYGE++ESKIINDRETGRSRGFGFVTF+DE+
Sbjct: 1   MASADIEFRCFVGGLAWATDDRALEQAFSQYGEIVESKIINDRETGRSRGFGFVTFRDEK 60

Query: 490 SMRDAIEGMNGQTLDGRNITVNEAQS 413
           +MRDAIEGMNGQ LDGRNITVNEAQS
Sbjct: 61  AMRDAIEGMNGQNLDGRNITVNEAQS 86


>gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
          Length = 178

 Score =  158 bits (399), Expect = 3e-36
 Identities = 76/82 (92%), Positives = 80/82 (97%)
 Frame = -2

Query: 658 DVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQSMRD 479
           DVE+RCFVGGLAWATTD +LSEAFSQYGEV+ESKIINDRETGRSRGFGFVTFKDEQ+MRD
Sbjct: 3   DVEYRCFVGGLAWATTDNTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRD 62

Query: 478 AIEGMNGQTLDGRNITVNEAQS 413
           AIEGMNGQ LDGRNITVNEAQS
Sbjct: 63  AIEGMNGQDLDGRNITVNEAQS 84


>gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
          Length = 156

 Score =  157 bits (396), Expect = 6e-36
 Identities = 74/83 (89%), Positives = 81/83 (97%)
 Frame = -2

Query: 661 ADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQSMR 482
           A+VE+RCFVGGLAWATTDQ+L +AFSQYGE+L+SKIINDRETGRSRGFGFVTFKDEQ+MR
Sbjct: 2   AEVEYRCFVGGLAWATTDQTLGDAFSQYGEILDSKIINDRETGRSRGFGFVTFKDEQAMR 61

Query: 481 DAIEGMNGQTLDGRNITVNEAQS 413
           DAIEGMNGQ LDGRNITVNEAQS
Sbjct: 62  DAIEGMNGQDLDGRNITVNEAQS 84


>emb|CBI32594.3| unnamed protein product [Vitis vinifera]
          Length = 121

 Score =  156 bits (395), Expect = 8e-36
 Identities = 75/86 (87%), Positives = 80/86 (93%)
 Frame = -2

Query: 670 MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQ 491
           MASA++E+RCFVGGLAWAT DQSL  AFSQ+GE+LESKIINDRETGRSRGFGFVTF  EQ
Sbjct: 1   MASAEIEYRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQ 60

Query: 490 SMRDAIEGMNGQTLDGRNITVNEAQS 413
           SMRDAIEGMNGQ LDGRNITVNEAQS
Sbjct: 61  SMRDAIEGMNGQNLDGRNITVNEAQS 86


>ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
           vinifera]
          Length = 162

 Score =  156 bits (395), Expect = 8e-36
 Identities = 75/86 (87%), Positives = 80/86 (93%)
 Frame = -2

Query: 670 MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFKDEQ 491
           MASA++E+RCFVGGLAWAT DQSL  AFSQ+GE+LESKIINDRETGRSRGFGFVTF  EQ
Sbjct: 1   MASAEIEYRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQ 60

Query: 490 SMRDAIEGMNGQTLDGRNITVNEAQS 413
           SMRDAIEGMNGQ LDGRNITVNEAQS
Sbjct: 61  SMRDAIEGMNGQNLDGRNITVNEAQS 86


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