BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00001707
         (1838 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]   599   e-168
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth...   597   e-168
ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synth...   589   e-165
emb|CBI15850.3| unnamed protein product [Vitis vinifera]              587   e-165
ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synth...   583   e-164
gb|EOY34659.1| Pseudouridine synthase family protein [Theobroma ...   569   e-159
ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synth...   563   e-158
ref|XP_004296032.1| PREDICTED: putative tRNA pseudouridine synth...   563   e-158
gb|EMJ08575.1| hypothetical protein PRUPE_ppa004352mg [Prunus pe...   557   e-156
ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Popu...   540   e-151
ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synth...   524   e-146
ref|XP_004490688.1| PREDICTED: putative tRNA pseudouridine synth...   524   e-146
ref|XP_006575435.1| PREDICTED: putative tRNA pseudouridine synth...   521   e-145
ref|XP_004490755.1| PREDICTED: putative tRNA pseudouridine synth...   518   e-144
gb|ESW14066.1| hypothetical protein PHAVU_008G250200g [Phaseolus...   512   e-142
ref|XP_004145230.1| PREDICTED: putative tRNA pseudouridine synth...   510   e-142
gb|ESW14065.1| hypothetical protein PHAVU_008G250100g [Phaseolus...   508   e-141
ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatul...   503   e-139
ref|XP_006410132.1| hypothetical protein EUTSA_v10016529mg [Eutr...   501   e-139
ref|XP_003615969.1| Pseudouridylate synthase [Medicago truncatul...   501   e-139

>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
          Length = 602

 Score =  599 bits (1545), Expect = e-168
 Identities = 321/536 (59%), Positives = 387/536 (72%), Gaps = 7/536 (1%)
 Frame = +3

Query: 54   MAVSSIRLPLSPWL-ATQSSIFPFSTKKNALNLLLRFSTSPSAALLSSEXXXXXXXXXXX 230
            M VSS+R PL PW+ +  +S   FS  +      L  S+S S+ +  S            
Sbjct: 1    MVVSSLRFPLFPWIISNHTSNLRFSNPRILPQWSLHCSSSSSSTVTESNPD--------- 51

Query: 231  XSLDSPNRWEAFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDS 410
                S  +WE+FRKKKVVMRVGYVG++YRGLQ+QRDE +LSTIEGELE A+FKAGGIRDS
Sbjct: 52   ---QSVQKWESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDS 108

Query: 411  NFGDLHKIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDPNGIALANYVNSFLPRNIK 590
            N+G+LHKIGW RSSRTDKGVHSLATMISLKMEIP  AWK+DPNGIALANYVN  LP NIK
Sbjct: 109  NYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIK 168

Query: 591  VFSILPSQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEIDVHLSDFNRILSGFEGDH 770
            VFSILPSQ+SFDARREC +RRYSYLLPAE+IGI  N +  EID H+++FN IL+ FEG+H
Sbjct: 169  VFSILPSQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEH 228

Query: 771  PFHNYTIRSKYRKLARRTKCQP----VWKRAGSGTDKSGSDFDESE-EETSGENDISLDE 935
            PF NYTIRSKYRK     K  P    V++RA S  + S S+F+ S+ EE SG N +   +
Sbjct: 229  PFQNYTIRSKYRK-QFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGEENSGVNGVISSD 287

Query: 936  ESNGGEEVVARDLGMDSDFSPMDSADKSLAGACSEKESTLKKQISVQPIRARWLHEPDER 1115
                       D G + + S   S  +   G+ +  E  LK+Q S   +RARWLH PDER
Sbjct: 288  ----------YDEGENQNSSESTSFVEHPVGSSNNNEKGLKEQSSKLVVRARWLHGPDER 337

Query: 1116 DRIGASHFRNIFQCRCGKLEHLSGLNFIEISICGESFMLHQIRKMVGTAVAIKRKXXXXX 1295
            DRI ASHFR IF C CGKLE   GL+++E+SICGESFMLHQIRKMVGTA+A+KR+     
Sbjct: 338  DRISASHFRKIFNCSCGKLEKFLGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRD 397

Query: 1296 XXXXXXXKFSRIVLPLAPSEVLILRGNNFAIRKRPGE-KRPEMLTLIESEDILKSVDEFY 1472
                   KFSRIVLPLAPSEVLILRGN+F++RK+PG  KRPEMLTL+ESE+ILKSVDEFY
Sbjct: 398  ILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKRPEMLTLMESEEILKSVDEFY 457

Query: 1473 HSILLHQLSTFLDPSKYPWHDWVEILDANTSIPEVQLEEVRTAWRVWKEKWESRMK 1640
             S++L Q+S FLDPSK PWHDW+E L   +SIPE +L++VRTAW++WKE + SR K
Sbjct: 458  TSVILPQVSKFLDPSKSPWHDWLENLTL-SSIPEAELDDVRTAWKLWKENFRSRTK 512


>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis vinifera]
          Length = 564

 Score =  597 bits (1540), Expect = e-168
 Identities = 325/555 (58%), Positives = 394/555 (70%), Gaps = 14/555 (2%)
 Frame = +3

Query: 54   MAVSSIRLPLSPWL-ATQSSIFPFSTKKNALNLLLRFSTSPSAALLSSEXXXXXXXXXXX 230
            M VSS+R PL PW+ +  +S   FS  +      L  S+S S+ +  S            
Sbjct: 1    MVVSSLRFPLFPWIISNHTSNLRFSNPRILPQWSLHCSSSSSSTVTESNPD--------- 51

Query: 231  XSLDSPNRWEAFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDS 410
                S  +WE+FRKKKVVMRVGYVG++YRGLQ+QRDE +LSTIEGELE A+FKAGGIRDS
Sbjct: 52   ---QSVQKWESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDS 108

Query: 411  NFGDLHKIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDPNGIALANYVNSFLPRNIK 590
            N+G+LHKIGW RSSRTDKGVHSLATMISLKMEIP  AWK+DPNGIALANYVN  LP NIK
Sbjct: 109  NYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIK 168

Query: 591  VFSILPSQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEIDVHLSDFNRILSGFEGDH 770
            VFSILPSQ+SFDARREC +RRYSYLLPAE+IGI  N +  EID H+++FN IL+ FEG+H
Sbjct: 169  VFSILPSQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEH 228

Query: 771  PFHNYTIRSKYRKLARRTKCQP----VWKRAGSGTDKSGSDFDESE-EETSGENDISLDE 935
            PF NYTIRSKYRK     K  P    V++RA S  + S S+F+ S+ EE SG N +   +
Sbjct: 229  PFQNYTIRSKYRK-QFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGEENSGINGVISSD 287

Query: 936  ESNGGEEVVARDLGMDSDFSPMDSADKSLAGACSEKESTLKKQISVQPIRARWLHEPDER 1115
                       D G + + S   S  +   G+ +  E  LK+Q     +RARWLH PDER
Sbjct: 288  ----------YDEGENQNSSESTSFVEHPVGSSNNNEKGLKEQSPKLVVRARWLHGPDER 337

Query: 1116 DRIGASHFRNIFQCRCGKLEHLSGLNFIEISICGESFMLHQIRKMVGTAVAIKRKXXXXX 1295
            DRI ASHFR IF C CGKLE   GL+++E+SICGESFMLHQIRKMVGTA+A+KR+     
Sbjct: 338  DRISASHFRKIFNCSCGKLEKFLGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRD 397

Query: 1296 XXXXXXXKFSRIVLPLAPSEVLILRGNNFAIRKRPGE-KRPEMLTLIESEDILKSVDEFY 1472
                   KFSRIVLPLAPSEVLILRGN+F++RK+PG  KRPEMLTL+ESE+ILKSVDEFY
Sbjct: 398  ILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKRPEMLTLMESEEILKSVDEFY 457

Query: 1473 HSILLHQLSTFLDPSKYPWHDWVEILDANTSIPEVQLEEVRTAWRVWKEKWESRMK---- 1640
             S++L Q+S FLDPSK PWHDW+E L   +SIPE +L++VRTAW++WKE + SR K    
Sbjct: 458  TSVILPQVSKFLDPSKSPWHDWLENLTL-SSIPEAELDDVRTAWKLWKENFRSRTKVMSI 516

Query: 1641 ---SGS*LMFMVLPS 1676
                 S LMF+ +P+
Sbjct: 517  GFSLVSTLMFLSVPN 531


>ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
            [Solanum tuberosum]
          Length = 487

 Score =  589 bits (1518), Expect = e-165
 Identities = 313/531 (58%), Positives = 380/531 (71%), Gaps = 4/531 (0%)
 Frame = +3

Query: 54   MAVSSIRLPLSPWLATQSSIFPFSTKKNALNLLLRFSTSPSAALLSSEXXXXXXXXXXXX 233
            MA   +RLP  P    + S      + + L ++  FSTSP    + S             
Sbjct: 1    MAGLCVRLPQIPVTNLRFS------RSSTLKIVRCFSTSPEDLSVQS------------- 41

Query: 234  SLDSPNRWEAFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSN 413
                 N+W+ F KKKVVMRVGYVGSDYRGLQ+QRDEH LSTIEGELEKAIFKAGGIRDSN
Sbjct: 42   -----NKWDPFIKKKVVMRVGYVGSDYRGLQMQRDEHQLSTIEGELEKAIFKAGGIRDSN 96

Query: 414  FGDLHKIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDPNGIALANYVNSFLPRNIKV 593
            FG+L+KIGWARSSRTDKGVHSLATMISLKMEIP  AW+DDPNGIALAN VNS LP NI+V
Sbjct: 97   FGNLYKIGWARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGIALANCVNSSLPENIRV 156

Query: 594  FSILPSQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEIDVHLSDFNRILSGFEGDHP 773
            FSILPS+K FDARREC+ R+YSYL+PAE+IGI  + T  EI+ H+++FN IL+ FEG+HP
Sbjct: 157  FSILPSKKRFDARRECNARKYSYLIPAEIIGIKNDSTSSEIEYHIANFNDILNSFEGEHP 216

Query: 774  FHNYTIRSKYRKLA---RRTKCQPVWKRAGSGTDKSGSDFDESEEETSGENDISLDEESN 944
            FHNYTIRSKYRK +      K + + K+    ++K  S  +ES            D E N
Sbjct: 217  FHNYTIRSKYRKQSPARNLLKNESLLKKGRPSSEKEISGSEES------------DGEQN 264

Query: 945  GGEEVVARDLGMDSDFSPMDSADKSLAGACSEKESTLKKQISVQPIRARWLHEPDERDRI 1124
            G E+ V          + +++ +++  G C+EK S  K   SV PI+ARWLHEPD RD++
Sbjct: 265  GKEKGVV---------TIVEAENQNPEGNCNEKVSHSKDLNSVIPIQARWLHEPDARDKL 315

Query: 1125 GASHFRNIFQCRCGKLEHLSGLNFIEISICGESFMLHQIRKMVGTAVAIKRKXXXXXXXX 1304
             ++HFR IF C CGKLE L G+N++E+SICGESFMLHQIRKMVGTAVAIKR         
Sbjct: 316  SSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPHDILR 375

Query: 1305 XXXXKFSRIVLPLAPSEVLILRGNNFAIRKRPGE-KRPEMLTLIESEDILKSVDEFYHSI 1481
                KFSRIVLPLAPSEVL+L+GNNFA+R  PG   RPEMLTL+ES+DILK+VD+FY+S 
Sbjct: 376  MSLCKFSRIVLPLAPSEVLVLKGNNFALRNHPGNIIRPEMLTLLESDDILKAVDDFYYST 435

Query: 1482 LLHQLSTFLDPSKYPWHDWVEILDANTSIPEVQLEEVRTAWRVWKEKWESR 1634
            +L QLS FLDPSK PW +WVEILDANTSIP+ QLEEVR AW++WK +++SR
Sbjct: 436  MLPQLSRFLDPSKSPWSEWVEILDANTSIPDSQLEEVRVAWKLWKAQYDSR 486


>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  587 bits (1512), Expect = e-165
 Identities = 314/535 (58%), Positives = 376/535 (70%), Gaps = 6/535 (1%)
 Frame = +3

Query: 54   MAVSSIRLPLSPWL-ATQSSIFPFSTKKNALNLLLRFSTSPSAALLSSEXXXXXXXXXXX 230
            M VSS+R PL PW+ +  +S   FS  +      L  S+S S+ +  S            
Sbjct: 1    MVVSSLRFPLFPWIISNHTSNLRFSNPRILPQWSLHCSSSSSSTVTESNPD--------- 51

Query: 231  XSLDSPNRWEAFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDS 410
                S  +WE+FRKKKVVMRVGYVG++YRGLQ+QRDE +LSTIEGELE A+FKAGGIRDS
Sbjct: 52   ---QSVQKWESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDS 108

Query: 411  NFGDLHKIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDPNGIALANYVNSFLPRNIK 590
            N+G+LHKIGW RSSRTDKGVHSLATMISLKMEIP  AWK+DPNGIALANYVN  LP NIK
Sbjct: 109  NYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIK 168

Query: 591  VFSILPSQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEIDVHLSDFNRILSGFEGDH 770
            VFSILPSQ+SFDARREC +RRYSYLLPAE+IGI  N +  EID H+++FN IL+ FEG+H
Sbjct: 169  VFSILPSQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEH 228

Query: 771  PFHNYTIRSKYRKLARRTKCQP----VWKRAGSGTDKSGSDFDESEEETSGENDISLDEE 938
            PF NYTIRSKYRK     K  P    V++RA S      SD+DE E + S E+   ++  
Sbjct: 229  PFQNYTIRSKYRK-QFPAKQSPGNGGVFRRAKSSV--ISSDYDEGENQNSSESTSFVEHP 285

Query: 939  SNGGEEVVARDLGMDSDFSPMDSADKSLAGACSEKESTLKKQISVQPIRARWLHEPDERD 1118
                                         G+ +  E  LK+Q     +RARWLH PDERD
Sbjct: 286  ----------------------------VGSSNNNEKGLKEQSPKLVVRARWLHGPDERD 317

Query: 1119 RIGASHFRNIFQCRCGKLEHLSGLNFIEISICGESFMLHQIRKMVGTAVAIKRKXXXXXX 1298
            RI ASHFR IF C CGKLE   GL+++E+SICGESFMLHQIRKMVGTA+A+KR+      
Sbjct: 318  RISASHFRKIFNCSCGKLEKFLGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDI 377

Query: 1299 XXXXXXKFSRIVLPLAPSEVLILRGNNFAIRKRPGE-KRPEMLTLIESEDILKSVDEFYH 1475
                  KFSRIVLPLAPSEVLILRGN+F++RK+PG  KRPEMLTL+ESE+ILKSVDEFY 
Sbjct: 378  LTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKRPEMLTLMESEEILKSVDEFYT 437

Query: 1476 SILLHQLSTFLDPSKYPWHDWVEILDANTSIPEVQLEEVRTAWRVWKEKWESRMK 1640
            S++L Q+S FLDPSK PWHDW+E L   +SIPE +L++VRTAW++WKE + SR K
Sbjct: 438  SVILPQVSKFLDPSKSPWHDWLENLTL-SSIPEAELDDVRTAWKLWKENFRSRTK 491


>ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Solanum
            lycopersicum]
          Length = 496

 Score =  583 bits (1504), Expect = e-164
 Identities = 301/465 (64%), Positives = 358/465 (76%), Gaps = 1/465 (0%)
 Frame = +3

Query: 249  NRWEAFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNFGDLH 428
            N+WE F KKKVVMRVGYVGSDYRGLQ+QRDEH LSTIEGELEKAIFKAGGIR+SNFG+L+
Sbjct: 38   NKWEPFIKKKVVMRVGYVGSDYRGLQMQRDEHQLSTIEGELEKAIFKAGGIRESNFGNLY 97

Query: 429  KIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDPNGIALANYVNSFLPRNIKVFSILP 608
            KIGWARSSRTDKGVHSLATMISLKMEIP  AW+DDPNGI LAN VNS LP NI+VFSILP
Sbjct: 98   KIGWARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGITLANCVNSSLPENIRVFSILP 157

Query: 609  SQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEIDVHLSDFNRILSGFEGDHPFHNYT 788
            S+K FDARREC+ R+YSYL+PAE+IGI  +    EI+ H+++FN IL+ FEG+HPFHNYT
Sbjct: 158  SKKRFDARRECNARKYSYLIPAEIIGIKNDSASSEIEYHIANFNDILNSFEGEHPFHNYT 217

Query: 789  IRSKYRKLARRTKCQPVWKRAGSGTDKSGSDFDESEEETSGENDISLDEESNGGEEVVAR 968
            IRSKYRK   ++  + + K       K G     SEEE SG  +I  D E N  E+ V  
Sbjct: 218  IRSKYRK---QSPARNLLK--NDSLLKKGR--PSSEEEISGSEEI--DGEQNRKEQGVV- 267

Query: 969  DLGMDSDFSPMDSADKSLAGACSEKESTLKKQISVQPIRARWLHEPDERDRIGASHFRNI 1148
                    + +++ +++  G C+ K S  K   SV PI+ARWLHEPD RD++ ++HFR I
Sbjct: 268  --------TIVEAENQNAEGNCNLKVSHSKDLNSVIPIQARWLHEPDARDKLSSAHFRRI 319

Query: 1149 FQCRCGKLEHLSGLNFIEISICGESFMLHQIRKMVGTAVAIKRKXXXXXXXXXXXXKFSR 1328
            F C CGKLE L G+N++E+SICGESFMLHQIRKMVGTAVAIKR             KFSR
Sbjct: 320  FHCHCGKLEKLLGMNYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPHDTLRMSLCKFSR 379

Query: 1329 IVLPLAPSEVLILRGNNFAIRKRPGE-KRPEMLTLIESEDILKSVDEFYHSILLHQLSTF 1505
            IVLPLAPSEVL+L+GNNFA+R  PG   RPEMLTL+ES+DILK+VD+FY+S LL QLS F
Sbjct: 380  IVLPLAPSEVLVLKGNNFALRNHPGNIIRPEMLTLLESDDILKAVDDFYYSTLLPQLSRF 439

Query: 1506 LDPSKYPWHDWVEILDANTSIPEVQLEEVRTAWRVWKEKWESRMK 1640
            LDPSK PW +WVEILDANTSIP+ QLEEVR AW++WK +++SR K
Sbjct: 440  LDPSKSPWSEWVEILDANTSIPDYQLEEVRVAWKLWKAQYDSRTK 484


>gb|EOY34659.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 507

 Score =  569 bits (1466), Expect = e-159
 Identities = 310/525 (59%), Positives = 371/525 (70%), Gaps = 2/525 (0%)
 Frame = +3

Query: 54   MAVSSIRLPLSPWLATQSSIFPFSTKKNALNLLLRFSTSPSAALLSSEXXXXXXXXXXXX 233
            MA+S +R PL+PWL    +  P   K     + LRF  S S A                 
Sbjct: 1    MAISCLRAPLAPWLMKTRN--PPPLKLPCPRIQLRFLCSSSTA--------------QPL 44

Query: 234  SLDSPNRWEAFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSN 413
               SP +WE FRKKKVVMRVGYVG++YRGLQ+QRDEH LSTIE ELE AIFKAGGIRDSN
Sbjct: 45   PPASP-KWEPFRKKKVVMRVGYVGTNYRGLQVQRDEHQLSTIENELETAIFKAGGIRDSN 103

Query: 414  FGDLHKIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDPNGIALANYVNSFLPRNIKV 593
            +GDLHKI WARSSRTDKGVHSLATMI+LKMEIPE AWK+DPNGIALA  VNS+LP +IKV
Sbjct: 104  YGDLHKIAWARSSRTDKGVHSLATMITLKMEIPEDAWKEDPNGIALAKCVNSYLPDSIKV 163

Query: 594  FSILPSQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEIDVHLSDFNRILSGFEGDHP 773
            FSILPSQKSFD RREC++R+YSYLLPAE+IGI  +F+  EI+ H+SDFN IL+ FEG+HP
Sbjct: 164  FSILPSQKSFDPRRECNLRKYSYLLPAEIIGIKSHFSEAEINHHISDFNSILNCFEGEHP 223

Query: 774  FHNYTIRSKYRKLARRTKCQPVWKRAGSGTDKSGSD-FDESEEETSGENDISLDEESNGG 950
            FHNYT R+KYR+        P  + A +G    G++  DES      E+D+   EE    
Sbjct: 224  FHNYTQRAKYRRQI------PPRQTARNGRVPKGAEAHDESSTSELEESDV---EEDPRI 274

Query: 951  EEVVARDLGMDSDFSPMDSADKSLAGACSEKESTLKKQISVQPIRARWLHEPDERDRIGA 1130
            EE       ++S+     S D+     C  + ++L+ Q S   +RARWL+EPDE DRI A
Sbjct: 275  EETTT----LNSE-EKSTSFDEPRVDCCDGQGNSLQYQSSNVVVRARWLYEPDETDRITA 329

Query: 1131 SHFRNIFQCRCGKLEHLSGLNFIEISICGESFMLHQIRKMVGTAVAIKRKXXXXXXXXXX 1310
            SHFR IF C CG+LE+  G ++IEISI GESFMLHQIRKMVGTAVA+KR           
Sbjct: 330  SHFRKIFLCSCGRLENSMGFDYIEISIWGESFMLHQIRKMVGTAVAVKRNLFPRDILTLS 389

Query: 1311 XXKFSRIVLPLAPSEVLILRGNNFAIRKRPGE-KRPEMLTLIESEDILKSVDEFYHSILL 1487
              KFSRIVLPLAPSEVLILRGN F +RK P    RPEMLT++ESE+ILK VD+FY S+LL
Sbjct: 390  LAKFSRIVLPLAPSEVLILRGNTFILRKMPSNITRPEMLTMVESEEILKEVDKFYRSVLL 449

Query: 1488 HQLSTFLDPSKYPWHDWVEILDANTSIPEVQLEEVRTAWRVWKEK 1622
             Q+S FLDPSK PW +WVE LDANTS+P+ +L+EVRTAW++WKEK
Sbjct: 450  PQVSKFLDPSKSPWKEWVENLDANTSVPDAELDEVRTAWKLWKEK 494


>ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X4
            [Citrus sinensis]
          Length = 539

 Score =  563 bits (1452), Expect = e-158
 Identities = 302/530 (56%), Positives = 368/530 (69%), Gaps = 7/530 (1%)
 Frame = +3

Query: 54   MAVSSIRLPLSPWLA----TQSSIFPFSTKKNALNLLLRFSTSPSAALLSSEXXXXXXXX 221
            MA+  +RL  SPW A    +  S   FS K +A+NLL        A+  S          
Sbjct: 1    MAIYPLRLLHSPWSARSITSTLSTVGFSNKISAVNLLPLSCYRCPASSSSKSSPSVSHTL 60

Query: 222  XXXXSLDSPNRWEAFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGI 401
                   S ++WE  RKKKV +RVGYVG+DYRGLQ+QRDEH+LSTIEGELE A+FKAGGI
Sbjct: 61   TRPTPNSSDDKWEPVRKKKVALRVGYVGTDYRGLQMQRDEHSLSTIEGELETAVFKAGGI 120

Query: 402  RDSNFGDLHKIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDPNGIALANYVNSFLPR 581
            R+SN+G+L KI WARSSRTDKGVHSLATMI LKMEIP  AWKDDP GI LA  VN+ LPR
Sbjct: 121  RESNYGNLQKIAWARSSRTDKGVHSLATMICLKMEIPPDAWKDDPYGIDLAKRVNAHLPR 180

Query: 582  NIKVFSILPSQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEIDVHLSDFNRILSGFE 761
            NIKVFSILPSQ+SFD RREC++R+YSYLLPAEVIGIN   T  EID H+SDFN IL+ FE
Sbjct: 181  NIKVFSILPSQRSFDPRRECNLRKYSYLLPAEVIGINSQLTAAEIDSHISDFNAILNEFE 240

Query: 762  GDHPFHNYTIRSKYRKLARRTKCQPVWKRAGSGTDKSGSDFDESEEETSGENDISLDEES 941
            G+HPFHNYT RSKYR+   +T C  V KRA +  D   S  +ESE E  G + +   EES
Sbjct: 241  GEHPFHNYTERSKYRRKPHKTGC--VSKRAKASKDAVFSRVEESEGEEDGFSKV---EES 295

Query: 942  NGGEEV-VARDLGMDSDFSPMDSADKSL--AGACSEKESTLKKQISVQPIRARWLHEPDE 1112
            +G E++ +  ++  D + +  +S    +     C++  + LK Q S   IRARWL+E DE
Sbjct: 296  DGEEDLGIGGEISSDDEKANQNSMVSGVHQEDCCNQHANGLKDQNSSSVIRARWLYETDE 355

Query: 1113 RDRIGASHFRNIFQCRCGKLEHLSGLNFIEISICGESFMLHQIRKMVGTAVAIKRKXXXX 1292
             D++ ASHFR IF C CGKLE   G  ++EISI GESFMLHQIRKMVGTAVA+KRK    
Sbjct: 356  ADKLSASHFRKIFSCSCGKLEKSLGFGYVEISISGESFMLHQIRKMVGTAVAVKRKLLPR 415

Query: 1293 XXXXXXXXKFSRIVLPLAPSEVLILRGNNFAIRKRPGEKRPEMLTLIESEDILKSVDEFY 1472
                    K SRIVLPLAPSEVL LR N+F++R RPG  RPEM T++ESE+ILK VDEFY
Sbjct: 416  DILTLSLAKHSRIVLPLAPSEVLFLRANSFSVRTRPGVTRPEMQTMVESEEILKMVDEFY 475

Query: 1473 HSILLHQLSTFLDPSKYPWHDWVEILDANTSIPEVQLEEVRTAWRVWKEK 1622
             S++L ++S FLD +K PW +W+E L+  TSIP  QL+EVR AW++WKEK
Sbjct: 476  TSVMLPEVSKFLDATKSPWTEWIENLEKFTSIPNEQLDEVRNAWQLWKEK 525


>ref|XP_004296032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Fragaria vesca
            subsp. vesca]
          Length = 509

 Score =  563 bits (1451), Expect = e-158
 Identities = 293/528 (55%), Positives = 381/528 (72%), Gaps = 2/528 (0%)
 Frame = +3

Query: 54   MAVSSIRLPLSPWLATQSSI-FPFSTKKNALNLLLRFSTSPSAALLSSEXXXXXXXXXXX 230
            MA+S +RLPLS WL    S+ + +    + LN++   STS + A                
Sbjct: 1    MAMSLLRLPLSLWLPKHRSVRYEYPKIPSRLNVICCCSTSAATA---------------E 45

Query: 231  XSLDSPNRWEAFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDS 410
             SL    RWE+ RK+KVV+RVGYVG+DYRGLQIQRD+ ++STIE ELE AIFKAGGIR+S
Sbjct: 46   ESLTHAERWESVRKRKVVLRVGYVGTDYRGLQIQRDDPSISTIEKELETAIFKAGGIRES 105

Query: 411  NFGDLHKIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDPNGIALANYVNSFLPRNIK 590
            NFG+L+KI WARSSRTDKGVHSLATMISLKMEIPE AW  DP GIAL N++NS+LPR+IK
Sbjct: 106  NFGNLNKISWARSSRTDKGVHSLATMISLKMEIPENAWDGDPYGIALVNHINSYLPRDIK 165

Query: 591  VFSILPSQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEIDVHLSDFNRILSGFEGDH 770
            VFS +P+Q+SFD R+EC++R YSYLLPA+VIGI  +F+  EI+ H++DFN IL+ FEG+H
Sbjct: 166  VFSAVPAQRSFDPRKECNLRMYSYLLPADVIGIKSHFSAAEIEDHIADFNDILNAFEGEH 225

Query: 771  PFHNYTIRSKYRKLARRTKCQPVWKRAGSGTDKSGSDFDESEEETSGENDISLDEESNGG 950
            PFHNYTIRSKYR +    K  P+++   S T++S  +   SE E S + D      ++  
Sbjct: 226  PFHNYTIRSKYR-MKLPGKKSPIYRNM-SKTERSTVEASSSELEGSDDED-KFKGRNSSE 282

Query: 951  EEVVARDLGMDSDFSPMDSADKSLAGACSEKESTLKKQISVQPIRARWLHEPDERDRIGA 1130
             EV+ ++  M S      + ++ L  AC ++E  LK++ +   + A+WL+EPDE DRIGA
Sbjct: 283  TEVLNQNSSMSS------NGNEILLHACKKQEDVLKEKSTDSVVYAKWLYEPDESDRIGA 336

Query: 1131 SHFRNIFQCRCGKLEHLSGLNFIEISICGESFMLHQIRKMVGTAVAIKRKXXXXXXXXXX 1310
            SHFR IF+C CGKLE      ++E+SI GESFMLHQIRKMVGTAVA+KRK          
Sbjct: 337  SHFRKIFRCSCGKLEKSLTHEYVELSIWGESFMLHQIRKMVGTAVAVKRKLLPRDILTLS 396

Query: 1311 XXKFSRIVLPLAPSEVLILRGNNFAIRKRPGE-KRPEMLTLIESEDILKSVDEFYHSILL 1487
              KFSRI+LPLAPSEVLILRGN F+IR+RPG  KRPEM+ ++ESE+++K VDEF+ S++L
Sbjct: 397  LAKFSRIILPLAPSEVLILRGNRFSIRERPGNVKRPEMIAMVESEEVIKQVDEFFTSVML 456

Query: 1488 HQLSTFLDPSKYPWHDWVEILDANTSIPEVQLEEVRTAWRVWKEKWES 1631
             Q++ FL+PS YPW +W+E LD NT IP+ +L+EVR AW+VWKEK+ES
Sbjct: 457  PQVAKFLEPSGYPWQEWIENLDRNTGIPDRELDEVRNAWKVWKEKFES 504


>gb|EMJ08575.1| hypothetical protein PRUPE_ppa004352mg [Prunus persica]
          Length = 515

 Score =  557 bits (1435), Expect = e-156
 Identities = 299/531 (56%), Positives = 366/531 (68%), Gaps = 5/531 (0%)
 Frame = +3

Query: 54   MAVSSIRLPLSPWLAT---QSSIFPFSTKKNALNLLLRFSTSPSAALLSSEXXXXXXXXX 224
            MA+SS+RLP S WL     QS  F        LNL+   S+  S A  +S          
Sbjct: 1    MAISSLRLPFSLWLPRLPIQSFRFSKPILPLRLNLIYCSSSISSTAQQTSTHL------- 53

Query: 225  XXXSLDSPNRWEAFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIR 404
                     +W++ RKKKVV+RVGYVGSDYRGLQ+QRDEH+LSTIE ELE AIF AGGIR
Sbjct: 54   --------EKWQSVRKKKVVLRVGYVGSDYRGLQMQRDEHSLSTIEKELETAIFNAGGIR 105

Query: 405  DSNFGDLHKIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDPNGIALANYVNSFLPRN 584
            DSN G+L+KI WARSSRTDKGVHSLATMIS KMEIPE AW  DP GIAL N++N +LP N
Sbjct: 106  DSNLGNLNKIAWARSSRTDKGVHSLATMISFKMEIPEKAWDGDPYGIALVNHINYYLPHN 165

Query: 585  IKVFSILPSQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEIDVHLSDFNRILSGFEG 764
            IKVFSILP+Q+SFD R+EC++R YSYLLPA+VIGI  +F+  EID H+SDFN IL+ FEG
Sbjct: 166  IKVFSILPAQRSFDPRKECNLRMYSYLLPADVIGIKSHFSSAEIDYHISDFNSILNCFEG 225

Query: 765  DHPFHNYTIRSKYRKLARRTKCQPVWK-RAGSGTDKSGSDFDESEEETSGENDISLDEES 941
            +HPFHNYTIRSKYR+        PV K R       +G    E+    S E+D+  + + 
Sbjct: 226  EHPFHNYTIRSKYRRKL------PVKKSRRHGSVSITGRSTGEASASESEESDVDENFDG 279

Query: 942  NGGEEVVARDLGMDSDFSPMDSADKSLAGACSEKESTLKKQISVQPIRARWLHEPDERDR 1121
                E  A  L  +S  SP  +++ +L  AC ++      Q +   IRARWL+EPDERDR
Sbjct: 280  TNTPESDAEVLNQNS--SPSSNSEGNLRNACEKQGDGGNDQSAGSVIRARWLYEPDERDR 337

Query: 1122 IGASHFRNIFQCRCGKLEHLSGLNFIEISICGESFMLHQIRKMVGTAVAIKRKXXXXXXX 1301
            I ASHFR IF C CGKLE   G +++E+SI GESFMLHQIRKMVGTAVAIKRK       
Sbjct: 338  ISASHFRKIFLCSCGKLEKSLGHDYVELSISGESFMLHQIRKMVGTAVAIKRKLLPRDIL 397

Query: 1302 XXXXXKFSRIVLPLAPSEVLILRGNNFAIRKRPGE-KRPEMLTLIESEDILKSVDEFYHS 1478
                  FSRI+LPLAPSEVL LRGN F+IR RPG   RPEM+ ++ES +I+K+VDEFY S
Sbjct: 398  TLSLAMFSRIILPLAPSEVLFLRGNRFSIRGRPGNVTRPEMMAMVESGEIIKAVDEFYTS 457

Query: 1479 ILLHQLSTFLDPSKYPWHDWVEILDANTSIPEVQLEEVRTAWRVWKEKWES 1631
            ++L ++S FL+PS YPW +WVE LD NT IP+ +L+EVR AW+VWKEK++S
Sbjct: 458  VMLPEVSKFLEPSGYPWKEWVENLDRNTGIPDAELDEVRNAWKVWKEKFDS 508


>ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Populus trichocarpa]
            gi|550325882|gb|EEE95884.2| hypothetical protein
            POPTR_0013s15030g [Populus trichocarpa]
          Length = 505

 Score =  540 bits (1392), Expect = e-151
 Identities = 301/538 (55%), Positives = 366/538 (68%), Gaps = 11/538 (2%)
 Frame = +3

Query: 54   MAVSSIRLPLSPWLATQSS--------IFPFSTKKNALNLLLRFSTSPSAALLSSEXXXX 209
            MA+SS+R PLSPWL  ++          FP         LLL  S S S   +S      
Sbjct: 1    MAISSLRFPLSPWLLLKTPKLKPSFRFSFPILPSSRHTQLLLLCSYSQSPPSISPPLTDS 60

Query: 210  XXXXXXXXSLDSPNRWEAFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFK 389
                    SL S  +WE+ RKKKV +RVGYVG+DYRGLQ Q D+H+L TIEGELE+AI++
Sbjct: 61   NSNQ----SLHS--KWESIRKKKVALRVGYVGTDYRGLQKQHDQHSLLTIEGELERAIYE 114

Query: 390  AGGIRDSNFGDLHKIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDPNGIALANYVNS 569
            AGGIR+SN+G+L+KI WARSSRTDKGVHSLAT I++KMEIPE AWKDD  G+ LA +VNS
Sbjct: 115  AGGIRESNYGNLNKISWARSSRTDKGVHSLATTITMKMEIPENAWKDDLYGMVLAKHVNS 174

Query: 570  FLPRNIKVFSILPSQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEIDVHLSDFNRIL 749
            +LP +I+V SILP+QKSFD RREC IR+YSYLLPAEVIGI  +F+  EID H+SDFN IL
Sbjct: 175  YLPDSIRVLSILPAQKSFDPRRECDIRKYSYLLPAEVIGIKSHFSMAEIDDHISDFNNIL 234

Query: 750  SGFEGDHPFHNYTIRSKYRKLARRTKCQPVWKRAGS--GTDKSGSDFDESEEETSGENDI 923
            + FEGDHPFHNYT+RSKYR+    TK   V KRA S  GT  SGS+          EN +
Sbjct: 235  NAFEGDHPFHNYTVRSKYRR-KYPTKNGHVSKRARSSWGTSASGSE----------ENHV 283

Query: 924  SLDEESNGGEEVVARDLGMDSDFSPMDSADKSLAGACSEKESTLKKQISVQPIRARWLHE 1103
             L + S                   ++S+       C      LK Q S  P+RARWLHE
Sbjct: 284  ELSQNS-------------------LESS------ICDLNGDILKDQSSNLPLRARWLHE 318

Query: 1104 PDERDRIGASHFRNIFQCRCGKLEHLSGLNFIEISICGESFMLHQIRKMVGTAVAIKRKX 1283
            PDE DRIGA+HFR IF+C CGKLE   G +F+EISI GESFMLHQIRKMVGTAVA+KRK 
Sbjct: 319  PDETDRIGAAHFRKIFRCSCGKLEKSLGFDFVEISIWGESFMLHQIRKMVGTAVAVKRKV 378

Query: 1284 XXXXXXXXXXXKFSRIVLPLAPSEVLILRGNNFAIRKRPGE-KRPEMLTLIESEDILKSV 1460
                       KFSRIVLPLAPSEVLILRGN+F++RK+ GE KRPEM T++ESE+IL++V
Sbjct: 379  LPRDLIMLSLTKFSRIVLPLAPSEVLILRGNDFSLRKKSGEGKRPEMETMVESEEILRAV 438

Query: 1461 DEFYHSILLHQLSTFLDPSKYPWHDWVEILDANTSIPEVQLEEVRTAWRVWKEKWESR 1634
            +EFY +++L Q+S FLDP    W +WVE LD  TSIP+ QL+EVR A +VW E ++ R
Sbjct: 439  NEFYSTMMLPQVSKFLDPCMPLWKEWVENLDKYTSIPDAQLDEVRIARKVWMENFKIR 496


>ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X2
            [Solanum tuberosum]
          Length = 423

 Score =  524 bits (1350), Expect = e-146
 Identities = 269/430 (62%), Positives = 326/430 (75%), Gaps = 4/430 (0%)
 Frame = +3

Query: 357  IEGELEKAIFKAGGIRDSNFGDLHKIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDP 536
            IEGELEKAIFKAGGIRDSNFG+L+KIGWARSSRTDKGVHSLATMISLKMEIP  AW+DDP
Sbjct: 14   IEGELEKAIFKAGGIRDSNFGNLYKIGWARSSRTDKGVHSLATMISLKMEIPADAWEDDP 73

Query: 537  NGIALANYVNSFLPRNIKVFSILPSQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEI 716
            NGIALAN VNS LP NI+VFSILPS+K FDARREC+ R+YSYL+PAE+IGI  + T  EI
Sbjct: 74   NGIALANCVNSSLPENIRVFSILPSKKRFDARRECNARKYSYLIPAEIIGIKNDSTSSEI 133

Query: 717  DVHLSDFNRILSGFEGDHPFHNYTIRSKYRKLA---RRTKCQPVWKRAGSGTDKSGSDFD 887
            + H+++FN IL+ FEG+HPFHNYTIRSKYRK +      K + + K+    ++K  S  +
Sbjct: 134  EYHIANFNDILNSFEGEHPFHNYTIRSKYRKQSPARNLLKNESLLKKGRPSSEKEISGSE 193

Query: 888  ESEEETSGENDISLDEESNGGEEVVARDLGMDSDFSPMDSADKSLAGACSEKESTLKKQI 1067
            ES            D E NG E+ V          + +++ +++  G C+EK S  K   
Sbjct: 194  ES------------DGEQNGKEKGVV---------TIVEAENQNPEGNCNEKVSHSKDLN 232

Query: 1068 SVQPIRARWLHEPDERDRIGASHFRNIFQCRCGKLEHLSGLNFIEISICGESFMLHQIRK 1247
            SV PI+ARWLHEPD RD++ ++HFR IF C CGKLE L G+N++E+SICGESFMLHQIRK
Sbjct: 233  SVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLHQIRK 292

Query: 1248 MVGTAVAIKRKXXXXXXXXXXXXKFSRIVLPLAPSEVLILRGNNFAIRKRPGE-KRPEML 1424
            MVGTAVAIKR             KFSRIVLPLAPSEVL+L+GNNFA+R  PG   RPEML
Sbjct: 293  MVGTAVAIKRNLLPHDILRMSLCKFSRIVLPLAPSEVLVLKGNNFALRNHPGNIIRPEML 352

Query: 1425 TLIESEDILKSVDEFYHSILLHQLSTFLDPSKYPWHDWVEILDANTSIPEVQLEEVRTAW 1604
            TL+ES+DILK+VD+FY+S +L QLS FLDPSK PW +WVEILDANTSIP+ QLEEVR AW
Sbjct: 353  TLLESDDILKAVDDFYYSTMLPQLSRFLDPSKSPWSEWVEILDANTSIPDSQLEEVRVAW 412

Query: 1605 RVWKEKWESR 1634
            ++WK +++SR
Sbjct: 413  KLWKAQYDSR 422


>ref|XP_004490688.1| PREDICTED: putative tRNA pseudouridine synthase-like [Cicer
            arietinum]
          Length = 483

 Score =  524 bits (1350), Expect = e-146
 Identities = 276/470 (58%), Positives = 331/470 (70%), Gaps = 3/470 (0%)
 Frame = +3

Query: 243  SPNRWEAFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNFGD 422
            SPN+WE F KKKVVMRVGYVG+D+RGLQ+QR+EH LSTIE ELE AIFK GGIRDSNFGD
Sbjct: 41   SPNKWEPFLKKKVVMRVGYVGTDFRGLQMQRNEHKLSTIEKELETAIFKVGGIRDSNFGD 100

Query: 423  LHKIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDPNGIALANYVNSFLPRNIKVFSI 602
            L KI W RSSRTDKGVHSLATMIS KMEIPE AWK D  GI LAN++NS+LP +I+VFSI
Sbjct: 101  LDKINWGRSSRTDKGVHSLATMISFKMEIPENAWKGDDYGIELANHINSYLPNSIRVFSI 160

Query: 603  LPSQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEIDVHLSDFNRILSGFEGDHPFHN 782
            LPS K FD RREC++R+YSYLLPA++IGI  +F+ +EID H+S+FN IL  FEGDHPFHN
Sbjct: 161  LPSTKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSILGVFEGDHPFHN 220

Query: 783  YTIRSKYRKLARRTKCQPVWKRAGSGTDKSG--SDFDESEEETSGENDISLDEESNGGEE 956
            YT+RS YRK     K  P      + T+ S   S  D   EE+  ++ +S  E+S+  +E
Sbjct: 221  YTVRSIYRKKNHARK-SPGNGGMSNRTESSSLISACDSESEESDADDSLSDGEQSHKPQE 279

Query: 957  VVARDLGMDSDFSPMDSADKSLAGACSEKESTLKKQISVQPIRARWLHEPDERDRIGASH 1136
                     S+F  ++  + SL                   IRARWLHEPD+ DR+ ASH
Sbjct: 280  --------SSEFDSLNGQNSSLG------------------IRARWLHEPDDADRLNASH 313

Query: 1137 FRNIFQCRCGKLEHLSGLNFIEISICGESFMLHQIRKMVGTAVAIKRKXXXXXXXXXXXX 1316
            FR I  C CGKLE L G NF+EI++ G+SFMLHQIRKMVGTAVA+KRK            
Sbjct: 314  FRKILCCSCGKLETLLGYNFVEINVWGDSFMLHQIRKMVGTAVAVKRKLIPRDILSLSLV 373

Query: 1317 KFSRIVLPLAPSEVLILRGNNFAIRKRPGE-KRPEMLTLIESEDILKSVDEFYHSILLHQ 1493
            KFSRIVLP+AP EVLILRGN F  R   G   RPEM++++ESE ILKSVDEFY S++L +
Sbjct: 374  KFSRIVLPIAPPEVLILRGNTF--RSSSGNCTRPEMVSMVESEQILKSVDEFYSSVMLPE 431

Query: 1494 LSTFLDPSKYPWHDWVEILDANTSIPEVQLEEVRTAWRVWKEKWESRMKS 1643
            LS FLD SK PW +WVE LD  +SIP+ QLEEVR AWR WKE + ++  S
Sbjct: 432  LSKFLDSSKSPWANWVEKLDKYSSIPDAQLEEVREAWRTWKENFRAKPTS 481


>ref|XP_006575435.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
            [Glycine max] gi|571441413|ref|XP_006575436.1| PREDICTED:
            putative tRNA pseudouridine synthase-like isoform X2
            [Glycine max] gi|571441415|ref|XP_006575437.1| PREDICTED:
            putative tRNA pseudouridine synthase-like isoform X3
            [Glycine max] gi|571441417|ref|XP_006575438.1| PREDICTED:
            putative tRNA pseudouridine synthase-like isoform X4
            [Glycine max]
          Length = 493

 Score =  521 bits (1341), Expect = e-145
 Identities = 276/465 (59%), Positives = 335/465 (72%), Gaps = 2/465 (0%)
 Frame = +3

Query: 243  SPNRWEAFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNFGD 422
            SP  W+  RKKKV M V YVG++YRGLQ+Q DEH+LSTIE ELE AIFKAGGIR+SNFGD
Sbjct: 35   SPQAWQPSRKKKVAMLVAYVGTNYRGLQMQHDEHSLSTIEKELETAIFKAGGIRESNFGD 94

Query: 423  LHKIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDPNGIALANYVNSFLPRNIKVFSI 602
            L KIGWARSSRTDKGVHSLAT+IS KMEIPE AW  DP G  LANYVNS+LP +IKV SI
Sbjct: 95   LQKIGWARSSRTDKGVHSLATIISFKMEIPENAWNGDPYGFGLANYVNSYLPFDIKVISI 154

Query: 603  LPSQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEIDVHLSDFNRILSGFEGDHPFHN 782
            LPSQ+SFD R+EC +R+YSYLLPAE+IGI  +F+ +E+D H+S+FN IL+ FEG HPFHN
Sbjct: 155  LPSQRSFDPRKECILRKYSYLLPAEIIGIQSHFS-DEVDYHISEFNDILNVFEGIHPFHN 213

Query: 783  YTIRSKYRKLARRTKCQPVWKRAGSGTDKSGSDFDESE-EETSGENDISLDEESNGGEEV 959
            YT RSKYRK     +       + SGT    S   ESE E + GE +   DE     E +
Sbjct: 214  YTARSKYRKQFPNRQ-----SSSKSGTSARESLSYESECEYSDGEENSETDEAYT--ENI 266

Query: 960  VARDLGMDSDFSPMDSADKSLAGACSEKESTLKKQISVQPIRARWLHEPDERDRIGASHF 1139
            V +       FS      + + G+ ++  + L  Q S    RARWL+EPDE DR+ ASHF
Sbjct: 267  VCQ----SQKFSETHHFAEPVVGSSNKNGNGLHDQDSRLVARARWLYEPDEADRLSASHF 322

Query: 1140 RNIFQCRCGKLEHLSGLNFIEISICGESFMLHQIRKMVGTAVAIKRKXXXXXXXXXXXXK 1319
            R +FQC CGKLE   G N+IEISI GESFMLHQIRKMVGTAVA+KRK            +
Sbjct: 323  RKVFQCSCGKLETSLGYNYIEISIQGESFMLHQIRKMVGTAVAVKRKALPKDIIKLSLTR 382

Query: 1320 FSRIVLPLAPSEVLILRGNNFAIRKRPGE-KRPEMLTLIESEDILKSVDEFYHSILLHQL 1496
            FSRI+LPLAPSE LILRGN F+IR RPG   RPEM T+++SE+I K+VD+FY S++L Q+
Sbjct: 383  FSRIILPLAPSEALILRGNRFSIRTRPGNITRPEMQTIVKSEEIKKAVDDFYTSVMLPQV 442

Query: 1497 STFLDPSKYPWHDWVEILDANTSIPEVQLEEVRTAWRVWKEKWES 1631
            S  LDPS+ PW +W+E LDA+TSIP  QL+EVR AW ++KEK+E+
Sbjct: 443  SKLLDPSRSPWDEWIEKLDAHTSIPNDQLDEVRKAWNLFKEKFET 487


>ref|XP_004490755.1| PREDICTED: putative tRNA pseudouridine synthase-like, partial [Cicer
            arietinum]
          Length = 474

 Score =  518 bits (1335), Expect = e-144
 Identities = 270/463 (58%), Positives = 339/463 (73%), Gaps = 1/463 (0%)
 Frame = +3

Query: 246  PNRWEAFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNFGDL 425
            P+ W+ FRKKKVVMR+ YVG++YRGLQIQ D+H+LST+E ELE AIFKAGGIRDSN GDL
Sbjct: 20   PHSWQPFRKKKVVMRLAYVGTNYRGLQIQPDQHSLSTVEKELESAIFKAGGIRDSNLGDL 79

Query: 426  HKIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDPNGIALANYVNSFLPRNIKVFSIL 605
             KIGWARSSRTDKGVHSLAT++S KMEIPE +W  DP G +LANYVNS+LP +IKV SIL
Sbjct: 80   EKIGWARSSRTDKGVHSLATILSFKMEIPENSWNGDPYGFSLANYVNSYLPCDIKVISIL 139

Query: 606  PSQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEIDVHLSDFNRILSGFEGDHPFHNY 785
            PSQ+SFD R+EC++R+YSYLLPAE+IGI    + +EID HLS+FN IL  FEG HPFHNY
Sbjct: 140  PSQRSFDPRKECNLRKYSYLLPAEIIGIQSYSSNDEIDYHLSEFNDILKEFEGGHPFHNY 199

Query: 786  TIRSKYRKLARRTKCQPVWKRAGSGTDKSGSDFDESEEETSGENDISLDEESNGGEEVVA 965
            T RS+YRK  RR   +P   ++G       S++++S++    E +  +DE     E +V 
Sbjct: 200  TARSRYRKHFRR---RPSQSKSGESLSAYNSEYEDSDK----EENFKIDEAHT--ENIVC 250

Query: 966  RDLGMDSDFSPMDSADKSLAGACSEKESTLKKQISVQPIRARWLHEPDERDRIGASHFRN 1145
            ++      F   DS +  L    +EK+S L  Q S   +RA+WL+EPD+ DR+ ASHFR 
Sbjct: 251  QNQKSSGTF---DSCE-HLNSTGNEKDS-LHDQSSRLVVRAKWLYEPDDADRLNASHFRR 305

Query: 1146 IFQCRCGKLEHLSGLNFIEISICGESFMLHQIRKMVGTAVAIKRKXXXXXXXXXXXXKFS 1325
            +F+C CGKLE     N+IEI I GESFMLHQIRKMVGTAVA+KRK            KFS
Sbjct: 306  VFKCCCGKLERSLRHNYIEIYIEGESFMLHQIRKMVGTAVAVKRKLLPRDIVTMSLSKFS 365

Query: 1326 RIVLPLAPSEVLILRGNNFAIRKRPGE-KRPEMLTLIESEDILKSVDEFYHSILLHQLST 1502
            RI+LPLAP EVLILRGN+F++R +PG   RPEM T++ESE+I K VD+FY S++L Q+S 
Sbjct: 366  RIILPLAPPEVLILRGNSFSMRNKPGNVTRPEMQTIVESEEINKVVDDFYTSVMLPQVSK 425

Query: 1503 FLDPSKYPWHDWVEILDANTSIPEVQLEEVRTAWRVWKEKWES 1631
            FLD SK PW +W+E LDA+TSIP  QL+EVR A  +WKE ++S
Sbjct: 426  FLDSSKVPWEEWIEKLDAHTSIPNDQLDEVRKARNLWKENFDS 468


>gb|ESW14066.1| hypothetical protein PHAVU_008G250200g [Phaseolus vulgaris]
          Length = 512

 Score =  512 bits (1318), Expect = e-142
 Identities = 270/477 (56%), Positives = 338/477 (70%), Gaps = 5/477 (1%)
 Frame = +3

Query: 234  SLDSP-NRWEAFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDS 410
            SL +P N+WE F KKKVVMRVGYVG+D+RGLQIQRDEH LSTIE ELE AIF AGG+RDS
Sbjct: 56   SLPTPSNKWEPFLKKKVVMRVGYVGTDFRGLQIQRDEHTLSTIEKELETAIFTAGGMRDS 115

Query: 411  NFGDLHKIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDPNGIALANYVNSFLPRNIK 590
            NFGDL+K+ W RSSRTDKGVHSLAT+IS KMEIPE AWK D  GIALAN +NS+LP  I+
Sbjct: 116  NFGDLNKVKWGRSSRTDKGVHSLATVISFKMEIPENAWKGDDYGIALANRINSYLPYTIR 175

Query: 591  VFSILPSQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEIDVHLSDFNRILSGFEGDH 770
            VFSILPS K FD RREC++R+YSYLLPA++IGI  +F+ +EID H+S+FN IL+ FEG+H
Sbjct: 176  VFSILPSTKRFDPRRECNLRKYSYLLPADIIGIQSHFSKDEIDFHISEFNSILNVFEGEH 235

Query: 771  PFHNYTIRSKYRK---LARRTKCQPVWKRAGSGTDKSGSDFDESEEETSGENDISLDEES 941
            PFHNYT+RSKYRK   + + +    +  R GS +  SG    ESE + S + D       
Sbjct: 236  PFHNYTVRSKYRKKYQVRQSSGSDVMSDRLGSSSLASGF---ESESDDSDDYDF------ 286

Query: 942  NGGEEVVARDLGMDSDFSPMDSADKSLAGACSEKESTLKKQISVQPIRARWLHEPDERDR 1121
                        +D   + +   ++S     S + + L  Q S   +RARWLHEPDE+DR
Sbjct: 287  ------------VDGSPTTLSDKEESHKPPESSESNGLSSQNSNVVVRARWLHEPDEKDR 334

Query: 1122 IGASHFRNIFQCRCGKLEHLSGLNFIEISICGESFMLHQIRKMVGTAVAIKRKXXXXXXX 1301
            + ASHFRN+F+C CGKLE   G +++EI I G+SFMLHQIRKMVGTAVA+KRK       
Sbjct: 335  LNASHFRNVFRCSCGKLETSMGYDYVEIHIWGDSFMLHQIRKMVGTAVAVKRKLIPKDVI 394

Query: 1302 XXXXXKFSRIVLPLAPSEVLILRGNNFAIRKRPGE-KRPEMLTLIESEDILKSVDEFYHS 1478
                 KFSRIVLPLAP EVLILRGN F +R + G   R EM++++ESE ILK+VDEFY  
Sbjct: 395  SVSLNKFSRIVLPLAPPEVLILRGNAFKMRSKAGNFTRQEMVSMVESEQILKAVDEFYTC 454

Query: 1479 ILLHQLSTFLDPSKYPWHDWVEILDANTSIPEVQLEEVRTAWRVWKEKWESRMKSGS 1649
            ++L ++S FLD S  PW  WVE L+  +SIP+ +L+EVR AW+ W+E +  R+KS S
Sbjct: 455  VVLPEVSKFLDSSNSPWEKWVENLENYSSIPDGELDEVRKAWKTWRENF--RVKSAS 509


>ref|XP_004145230.1| PREDICTED: putative tRNA pseudouridine synthase-like [Cucumis
            sativus]
          Length = 507

 Score =  510 bits (1313), Expect = e-142
 Identities = 285/530 (53%), Positives = 355/530 (66%), Gaps = 9/530 (1%)
 Frame = +3

Query: 54   MAVSSIRLPLSPWLATQSSI---FP---FSTKKNALN-LLLRFSTSPSAALLSSEXXXXX 212
            M+VSS+RLPLSPW+   SS    FP   F ++   L   LL F +S +A+          
Sbjct: 1    MSVSSLRLPLSPWITKASSSCFRFPDPVFVSRTPPLRPALLHFFSSSTAST--------- 51

Query: 213  XXXXXXXSLDSPNRWEAFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKA 392
                   + D   +W+AFRKKKVV+R+GYVG+DYRGLQ+QR++ +  TIE ELE AI+KA
Sbjct: 52   DAFSTRCAPDQLRKWQAFRKKKVVLRIGYVGTDYRGLQMQRNQLSHPTIEQELEDAIYKA 111

Query: 393  GGIRDSNFGDLHKIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDPNGIALANYVNSF 572
            GGI DSN+G+L+KI WARSSRTDKGVHSLAT I+LKMEIP  AW DDP GI+LA+Y+NS+
Sbjct: 112  GGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWIDDPCGISLADYINSY 171

Query: 573  LPRNIKVFSILPSQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEIDVHLSDFNRILS 752
            LP NIKVF I+P+QK FD R+EC +R YSYLLPA++IGI       EID H+SDF  IL 
Sbjct: 172  LPDNIKVFGIVPAQKRFDPRKECDVRMYSYLLPAKLIGIESKLKTTEIDCHISDFKDILK 231

Query: 753  GFEGDHPFHNYTIRSKYRKLARRTKCQPVWKRAGSGTDKSGSDFDESEEETSG-ENDISL 929
             FEGDHPFHNYT+RS YR    R + + +     SG   S  D   SE E S  END  +
Sbjct: 232  SFEGDHPFHNYTVRSIYR---TRIRAKQLVYALKSGKKVSPGDMSNSEFEGSDQENDTFV 288

Query: 930  DEESNGGEEVVARDLGMDSDFSPMDSADKSLAGACSEKESTLKKQISVQPIRARWLHEPD 1109
            +    G +E   R        SP  S  ++L   CS+ E   +    ++ +RARWLHEPD
Sbjct: 289  E----GIKEPDQR--------SPSLSVCENLTEVCSKLEDGSE---LLKGVRARWLHEPD 333

Query: 1110 ERDRIGASHFRNIFQCRCGKLEHLSGLNFIEISICGESFMLHQIRKMVGTAVAIKRKXXX 1289
            E+DRIGASHFR I  C CGKLE   G +FIEISI GESFMLHQIRKM+ TAVA+KRK   
Sbjct: 334  EKDRIGASHFRRILYCSCGKLETYFGCDFIEISIWGESFMLHQIRKMIATAVAVKRKLLP 393

Query: 1290 XXXXXXXXXKFSRIVLPLAPSEVLILRGNNFAIRKRPG-EKRPEMLTLIESEDILKSVDE 1466
                     KFSRIVLP+AP+EVL+LRGN+F+ RKRPG   R E+ TL ES+DI+ SV+E
Sbjct: 394  RDIITLSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGAPMRSELFTLNESDDIVNSVNE 453

Query: 1467 FYHSILLHQLSTFLDPSKYPWHDWVEILDANTSIPEVQLEEVRTAWRVWK 1616
            FY S +L +++ FLD    PW +WVE LD  TSIP  +L+EVR+AW+ WK
Sbjct: 454  FYRSAILPEVTKFLDTESPPWKEWVEKLDKYTSIPNEELDEVRSAWKAWK 503


>gb|ESW14065.1| hypothetical protein PHAVU_008G250100g [Phaseolus vulgaris]
          Length = 507

 Score =  508 bits (1308), Expect = e-141
 Identities = 267/465 (57%), Positives = 327/465 (70%), Gaps = 1/465 (0%)
 Frame = +3

Query: 243  SPNRWEAFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNFGD 422
            S   W+  RKKKVVMRV YVG++YRGLQ+Q DEH LSTIE ELE A+FKAGGIR+SNFGD
Sbjct: 50   SSQSWQPSRKKKVVMRVAYVGTNYRGLQMQHDEHFLSTIEKELETAVFKAGGIRESNFGD 109

Query: 423  LHKIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDPNGIALANYVNSFLPRNIKVFSI 602
            L KI WARSSRTDKGVHSLAT++S KMEIPE AW  DP G  LANYVNS+LP +IKV SI
Sbjct: 110  LQKIKWARSSRTDKGVHSLATIVSFKMEIPENAWNGDPYGFGLANYVNSYLPFDIKVLSI 169

Query: 603  LPSQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEIDVHLSDFNRILSGFEGDHPFHN 782
            LPSQ+SFD R+EC+ R+YSYLLPAE+IGI  + + +EID H+S+F+ IL+ FEG+HPFHN
Sbjct: 170  LPSQRSFDPRKECAWRKYSYLLPAEIIGIQSDSSNDEIDYHISEFHDILNVFEGEHPFHN 229

Query: 783  YTIRSKYRKLARRTKCQPVWKRAGSGTDKSGSDFDESEEETSGENDISLDEESNGGEEVV 962
            YT R+KYRK           K+  S + +    ++   E +  E +  +DE      E  
Sbjct: 230  YTARAKYRKHFPN-------KQLSSKSVERLPPYESECEYSDEEENFEIDEAFTENIECR 282

Query: 963  ARDLGMDSDFSPMDSADKSLAGACSEKESTLKKQISVQPIRARWLHEPDERDRIGASHFR 1142
            ++      +F       K + G+ ++  + L  Q S    RARWL+EPDE DR+ ASHFR
Sbjct: 283  SQKCSETHNFG------KPVVGSSNKNGNRLPGQDSRLVARARWLYEPDEADRLSASHFR 336

Query: 1143 NIFQCRCGKLEHLSGLNFIEISICGESFMLHQIRKMVGTAVAIKRKXXXXXXXXXXXXKF 1322
             +FQC CGKLE   G N+IEISI GESFMLHQIRKMVGTAVA+KRK            +F
Sbjct: 337  KVFQCSCGKLETSLGYNYIEISIQGESFMLHQIRKMVGTAVAVKRKVLPKDIIKLSLARF 396

Query: 1323 SRIVLPLAPSEVLILRGNNFAIRKRPGE-KRPEMLTLIESEDILKSVDEFYHSILLHQLS 1499
            SRI+LPLAPSEVLILRGN F+IR RPG   RPEM  ++ESE+I K+VD FY S++L Q+S
Sbjct: 397  SRIILPLAPSEVLILRGNRFSIRTRPGNVTRPEMQAMVESEEINKAVDGFYTSVMLPQVS 456

Query: 1500 TFLDPSKYPWHDWVEILDANTSIPEVQLEEVRTAWRVWKEKWESR 1634
             FLDPS  PW +W+E LDA TSIP  QL+EVR AW + +E  ESR
Sbjct: 457  KFLDPSGSPWEEWIEKLDAYTSIPNDQLDEVRKAWNLLQENLESR 501


>ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatula]
            gi|355517306|gb|AES98929.1| Pseudouridylate synthase
            [Medicago truncatula]
          Length = 501

 Score =  503 bits (1294), Expect = e-139
 Identities = 270/530 (50%), Positives = 350/530 (66%), Gaps = 1/530 (0%)
 Frame = +3

Query: 57   AVSSIRLPLSPWLATQSSIFPFSTKKNALNLLLRFSTSPSAALLSSEXXXXXXXXXXXXS 236
            A SS+RL LSP                   LL +   + S  ++ +             S
Sbjct: 4    AASSLRLTLSP-------------------LLRKVPYTNSTPIIGNRRRWECFRYCSFSS 44

Query: 237  LDSPNRWEAFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNF 416
                  W+ FRKKKVVMR+ Y G++YRGLQ+QRD+++LST+E ELE AIFKAGGIR+SN 
Sbjct: 45   TPQSYSWQPFRKKKVVMRIAYTGTNYRGLQMQRDQNSLSTVEKELESAIFKAGGIRESNL 104

Query: 417  GDLHKIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDPNGIALANYVNSFLPRNIKVF 596
            GDL KIGWARSSRTDKGVHSLATM++ KMEIPE +W +DP G ALANYVNS+LP +IKV 
Sbjct: 105  GDLEKIGWARSSRTDKGVHSLATMVAFKMEIPENSWNEDPFGFALANYVNSYLPCDIKVI 164

Query: 597  SILPSQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEIDVHLSDFNRILSGFEGDHPF 776
            SILP+Q+SFD R+EC +R+YSYLLPA++IGI  + + +EID H+S+FN IL  FEG HPF
Sbjct: 165  SILPAQRSFDPRKECVLRKYSYLLPADIIGIQSHSSNDEIDYHMSEFNDILKEFEGGHPF 224

Query: 777  HNYTIRSKYRKLARRTKCQPVWKRAGSGTDKSGSDFDESEEETSGENDISLDEESNGGEE 956
            HNYT RS+YR+   R   +P   + G       S+ ++S+E    E +  +DE   G  E
Sbjct: 225  HNYTSRSRYRRHIPR---RPSHSKCGEILSAYNSEQEDSDE----EENFKVDEALTGNIE 277

Query: 957  VVARDLGMDSDFSPMDSADKSLAGACSEKESTLKKQISVQPIRARWLHEPDERDRIGASH 1136
               +     S     DS +  +    +  +  L  Q S   +RA+WL+EPDE DR+ ASH
Sbjct: 278  CQNQKSSGTS-----DSCEPVIE---TGNKGNLHDQSSSSVVRAKWLYEPDEADRLNASH 329

Query: 1137 FRNIFQCRCGKLEHLSGLNFIEISICGESFMLHQIRKMVGTAVAIKRKXXXXXXXXXXXX 1316
            FR +F+C  GKLE   G ++IEI I GESFMLHQIRKMV TAVA+KRK            
Sbjct: 330  FRRVFRCSSGKLEKSMGHSYIEIYIEGESFMLHQIRKMVATAVAVKRKLLPRDIITLSLS 389

Query: 1317 KFSRIVLPLAPSEVLILRGNNFAIRKRPGE-KRPEMLTLIESEDILKSVDEFYHSILLHQ 1493
            KFSRI+LPLAPSEVL+LRGN+F++R +PG   RPEM T++ESE+I K VD+FY S++L Q
Sbjct: 390  KFSRIILPLAPSEVLLLRGNSFSMRTKPGNVTRPEMQTIVESEEINKVVDDFYRSVMLPQ 449

Query: 1494 LSTFLDPSKYPWHDWVEILDANTSIPEVQLEEVRTAWRVWKEKWESRMKS 1643
            +S FLDPS+ PW +W+E  DA+TSIP  QL+EVR A  +WKE ++S M +
Sbjct: 450  VSKFLDPSRVPWVEWIEKFDAHTSIPNDQLDEVRKARNLWKENFDSVMSA 499


>ref|XP_006410132.1| hypothetical protein EUTSA_v10016529mg [Eutrema salsugineum]
            gi|557111301|gb|ESQ51585.1| hypothetical protein
            EUTSA_v10016529mg [Eutrema salsugineum]
          Length = 512

 Score =  501 bits (1291), Expect = e-139
 Identities = 259/459 (56%), Positives = 316/459 (68%), Gaps = 1/459 (0%)
 Frame = +3

Query: 249  NRWEAFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNFGDLH 428
            ++WE++RKKKVV+R+GYVG+DYRGLQIQRD+ AL TIEGELE AI+KAGGI DSNFGDLH
Sbjct: 57   DKWESYRKKKVVIRIGYVGTDYRGLQIQRDDPALKTIEGELEVAIYKAGGILDSNFGDLH 116

Query: 429  KIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDPNGIALANYVNSFLPRNIKVFSILP 608
            KIGWARSSRTDKGVHSLAT ISLKMEIP+ AWKDDP G  LA  ++  LP NI+VFS+LP
Sbjct: 117  KIGWARSSRTDKGVHSLATTISLKMEIPDTAWKDDPQGTVLAKCISKHLPENIRVFSVLP 176

Query: 609  SQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEIDVHLSDFNRILSGFEGDHPFHNYT 788
            SQ+ FD RREC++R YSYLLP  VIG+  +FT +EID H+SDFN IL  FEGD+PFHNYT
Sbjct: 177  SQRRFDPRRECTLRMYSYLLPVGVIGVKNSFTSDEIDDHISDFNEILKEFEGDYPFHNYT 236

Query: 789  IRSKYRKLARRTKCQPVWKRAGSGTDKSGSDFDESEEETSGENDISLDEESNGGEEVVAR 968
             RSKYRK A++   Q       +G       F+ S  E + EN    +EE  G E     
Sbjct: 237  QRSKYRKKAKQKLTQR------NGRPPKKPKFEASVSEYTEENCRGNEEEVEGEE----- 285

Query: 969  DLGMDSDFSPMDSADKSLAGACSEKESTLKKQISVQPIRARWLHEPDERDRIGASHFRNI 1148
                         AD        E ++T         IRA+WLHEPDE D++ A+HFR +
Sbjct: 286  -------------ADGESNEEVPESDNTQAY------IRAKWLHEPDETDKLSAAHFRKV 326

Query: 1149 FQCRCGKLEHLSGLNFIEISICGESFMLHQIRKMVGTAVAIKRKXXXXXXXXXXXXKFSR 1328
            F+CRCGKLE   G  F+EISI GESFMLHQIRKM+GTAVA+KR+            KF+R
Sbjct: 327  FRCRCGKLETSLGFCFVEISIWGESFMLHQIRKMIGTAVAVKRELLPRDIIRLSLNKFTR 386

Query: 1329 IVLPLAPSEVLILRGNNFAIRKRPGE-KRPEMLTLIESEDILKSVDEFYHSILLHQLSTF 1505
            IVLPLAPSEVLILRGN+F + K PG+ KRPE+  + ESE++ K VDEFY  +++ Q+S F
Sbjct: 387  IVLPLAPSEVLILRGNSFEVLKSPGKFKRPEVKAMSESEEVEKEVDEFYRRVMVPQVSRF 446

Query: 1506 LDPSKYPWHDWVEILDANTSIPEVQLEEVRTAWRVWKEK 1622
            LD  K PW +W+E L+ N  + + QLE VR  W  WK K
Sbjct: 447  LDAEKAPWEEWLEHLERNDGLIDEQLENVRRGWEEWKAK 485


>ref|XP_003615969.1| Pseudouridylate synthase [Medicago truncatula]
            gi|355517304|gb|AES98927.1| Pseudouridylate synthase
            [Medicago truncatula]
          Length = 483

 Score =  501 bits (1290), Expect = e-139
 Identities = 260/467 (55%), Positives = 317/467 (67%), Gaps = 1/467 (0%)
 Frame = +3

Query: 246  PNRWEAFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNFGDL 425
            P +W  + KKKVVMRVGY+G+D+RGLQIQR++H LSTIE ELE AIFK GGIRDSN+GDL
Sbjct: 48   PEKWVPYLKKKVVMRVGYIGTDFRGLQIQRNDHKLSTIEKELETAIFKVGGIRDSNYGDL 107

Query: 426  HKIGWARSSRTDKGVHSLATMISLKMEIPECAWKDDPNGIALANYVNSFLPRNIKVFSIL 605
             KI W RSSRTDKGVHSL+TMIS KMEIPE AWK D  GI +AN++NS+LP +I+VFS+L
Sbjct: 108  DKINWGRSSRTDKGVHSLSTMISFKMEIPENAWKGDDYGIEMANHINSYLPNSIRVFSVL 167

Query: 606  PSQKSFDARRECSIRRYSYLLPAEVIGINKNFTPEEIDVHLSDFNRILSGFEGDHPFHNY 785
            PS K FD R+ECS+R+YSYLLPA++IG+  +F+ +E D H+S+FN IL  FEGDHPFHNY
Sbjct: 168  PSTKRFDPRKECSMRKYSYLLPADIIGVQSHFSEDETDFHISEFNSILGAFEGDHPFHNY 227

Query: 786  TIRSKYRKLARRTKCQPVWKRAGSGTDKSGSDFDESEEETSGENDISLDEESNGGEEVVA 965
            T+RS YRK     K        G  ++ +GS    S  ++  E   + D  S  GE+   
Sbjct: 228  TVRSVYRKKHHARKS----PGNGGMSNMTGSSSLVSACDSENEESDTDDSMSGNGEQ--- 280

Query: 966  RDLGMDSDFSPMDSADKSLAGACSEKESTLKKQISVQPIRARWLHEPDERDRIGASHFRN 1145
                               +  CSE  S          ++ARWLHEPD  DR+ ASHFR 
Sbjct: 281  ----------------SHKSQECSESNS----------LKARWLHEPDAADRLNASHFRK 314

Query: 1146 IFQCRCGKLEHLSGLNFIEISICGESFMLHQIRKMVGTAVAIKRKXXXXXXXXXXXXKFS 1325
            I +C CGKLE L G N+IEI + G+SFMLHQIRKMVGTAVA+KR             KFS
Sbjct: 315  ILRCSCGKLETLLGYNYIEIDVWGDSFMLHQIRKMVGTAVAVKRNSIPKDIFLLSLIKFS 374

Query: 1326 RIVLPLAPSEVLILRGNNFAIRKRPGE-KRPEMLTLIESEDILKSVDEFYHSILLHQLST 1502
            RIVLP+AP EVLILRGN F +    G   RPEM++++ESE ILKSVDEFY S++L +LS 
Sbjct: 375  RIVLPIAPPEVLILRGNAFRMWSSGGSYTRPEMVSMVESEQILKSVDEFYTSVMLPELSK 434

Query: 1503 FLDPSKYPWHDWVEILDANTSIPEVQLEEVRTAWRVWKEKWESRMKS 1643
            FLD SK PW DWVE LD  +SIP  QLEEVR AWR WKE + ++  S
Sbjct: 435  FLDSSKSPWADWVEKLDKYSSIPNDQLEEVREAWRTWKENFRAKPAS 481