BLASTX nr result
ID: Catharanthus22_contig00001253
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00001253
(422 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006477103.1| PREDICTED: 50S ribosomal protein L19-1, chlo... 135 6e-30
ref|XP_006440191.1| hypothetical protein CICLE_v10021998mg [Citr... 135 6e-30
gb|ABD64915.1| plastid ribosomal protein L19, putative [Brassica... 135 7e-30
ref|XP_006414215.1| hypothetical protein EUTSA_v10026152mg [Eutr... 134 1e-29
ref|XP_006398416.1| hypothetical protein EUTSA_v10001011mg [Eutr... 134 1e-29
ref|XP_006284481.1| hypothetical protein CARUB_v10005667mg [Caps... 134 1e-29
gb|ABD65070.1| plastid ribosomal protein L19, putative [Brassica... 134 1e-29
gb|ACF23041.1| ST10 [Eutrema halophilum] 134 1e-29
ref|XP_002870097.1| ribosomal protein L19 family protein [Arabid... 133 3e-29
ref|NP_567531.1| 50S ribosomal protein L19-1 [Arabidopsis thalia... 133 3e-29
gb|EXC02074.1| 50S ribosomal protein L19-1 [Morus notabilis] 132 4e-29
ref|XP_002326473.1| predicted protein [Populus trichocarpa] gi|5... 132 4e-29
dbj|BAA97152.1| unnamed protein product [Arabidopsis thaliana] 132 5e-29
ref|XP_002863352.1| hypothetical protein ARALYDRAFT_494259 [Arab... 132 5e-29
gb|AAM64533.1| contains similarity to plastid ribosomal protein ... 132 5e-29
ref|NP_568677.1| 50S ribosomal protein L19-2 [Arabidopsis thalia... 132 5e-29
ref|XP_006281041.1| hypothetical protein CARUB_v10027056mg [Caps... 132 6e-29
ref|XP_004245816.1| PREDICTED: 50S ribosomal protein L19, chloro... 132 6e-29
gb|EOY24209.1| Ribosomal protein L19 family protein [Theobroma c... 131 8e-29
ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloro... 131 8e-29
>ref|XP_006477103.1| PREDICTED: 50S ribosomal protein L19-1, chloroplastic-like [Citrus
sinensis]
Length = 236
Score = 135 bits (340), Expect = 6e-30
Identities = 69/91 (75%), Positives = 73/91 (80%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GDVVEIKLEVPENRRRLS+YKGIVMS+QN VEIVFPLYSPN
Sbjct: 146 IRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPLYSPN 205
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 206 IKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
>ref|XP_006440191.1| hypothetical protein CICLE_v10021998mg [Citrus clementina]
gi|557542453|gb|ESR53431.1| hypothetical protein
CICLE_v10021998mg [Citrus clementina]
Length = 236
Score = 135 bits (340), Expect = 6e-30
Identities = 69/91 (75%), Positives = 73/91 (80%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GDVVEIKLEVPENRRRLS+YKGIVMS+QN VEIVFPLYSPN
Sbjct: 146 IRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPLYSPN 205
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 206 IKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
>gb|ABD64915.1| plastid ribosomal protein L19, putative [Brassica oleracea]
Length = 214
Score = 135 bits (339), Expect = 7e-30
Identities = 68/91 (74%), Positives = 73/91 (80%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GD+VEIKLEVPENRRRLS+YKGIVMS+QN VEIVFPLYSPN
Sbjct: 124 IRTGDIVEIKLEVPENRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPLYSPN 183
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 184 IKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 214
>ref|XP_006414215.1| hypothetical protein EUTSA_v10026152mg [Eutrema salsugineum]
gi|557115385|gb|ESQ55668.1| hypothetical protein
EUTSA_v10026152mg [Eutrema salsugineum]
Length = 229
Score = 134 bits (337), Expect = 1e-29
Identities = 67/91 (73%), Positives = 73/91 (80%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GD+VEIKLEVPENRRRLS+YKGIVMS+QN VEIVFP+YSPN
Sbjct: 139 IRTGDIVEIKLEVPENRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPN 198
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 199 IKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 229
>ref|XP_006398416.1| hypothetical protein EUTSA_v10001011mg [Eutrema salsugineum]
gi|557099505|gb|ESQ39869.1| hypothetical protein
EUTSA_v10001011mg [Eutrema salsugineum]
Length = 226
Score = 134 bits (337), Expect = 1e-29
Identities = 67/91 (73%), Positives = 73/91 (80%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GD+VEIKLEVPENRRRLS+YKGIVMS+QN VEIVFP+YSPN
Sbjct: 136 IRTGDIVEIKLEVPENRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPN 195
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 196 IKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 226
>ref|XP_006284481.1| hypothetical protein CARUB_v10005667mg [Capsella rubella]
gi|482553186|gb|EOA17379.1| hypothetical protein
CARUB_v10005667mg [Capsella rubella]
Length = 227
Score = 134 bits (337), Expect = 1e-29
Identities = 67/91 (73%), Positives = 73/91 (80%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GD+VEIKLEVPENRRRLS+YKGIVMS+QN VEIVFP+YSPN
Sbjct: 137 IRTGDIVEIKLEVPENRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPN 196
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 197 IKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 227
>gb|ABD65070.1| plastid ribosomal protein L19, putative [Brassica oleracea]
Length = 224
Score = 134 bits (337), Expect = 1e-29
Identities = 67/91 (73%), Positives = 73/91 (80%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GD+VEIKLEVPENRRRLS+YKGIVMS+QN VEIVFP+YSPN
Sbjct: 134 IRTGDIVEIKLEVPENRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPN 193
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 194 IKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 224
>gb|ACF23041.1| ST10 [Eutrema halophilum]
Length = 136
Score = 134 bits (337), Expect = 1e-29
Identities = 67/91 (73%), Positives = 73/91 (80%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GD+VEIKLEVPENRRRLS+YKGIVMS+QN VEIVFP+YSPN
Sbjct: 46 IRTGDIVEIKLEVPENRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPN 105
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 106 IKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 136
>ref|XP_002870097.1| ribosomal protein L19 family protein [Arabidopsis lyrata subsp.
lyrata] gi|297315933|gb|EFH46356.1| ribosomal protein
L19 family protein [Arabidopsis lyrata subsp. lyrata]
Length = 225
Score = 133 bits (334), Expect = 3e-29
Identities = 66/91 (72%), Positives = 73/91 (80%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GD+VEIKLEVPEN+RRLS+YKGIVMS+QN VEIVFP+YSPN
Sbjct: 135 IRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPN 194
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 195 IKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 225
>ref|NP_567531.1| 50S ribosomal protein L19-1 [Arabidopsis thaliana]
gi|75248729|sp|Q8W463.1|RK191_ARATH RecName: Full=50S
ribosomal protein L19-1, chloroplastic; Flags: Precursor
gi|17065490|gb|AAL32899.1| Unknown protein [Arabidopsis
thaliana] gi|20148593|gb|AAM10187.1| unknown protein
[Arabidopsis thaliana] gi|21554252|gb|AAM63327.1|
contains similarity to plastid ribosomal protein L19
[Arabidopsis thaliana] gi|332658510|gb|AEE83910.1| 50S
ribosomal protein L19-1 [Arabidopsis thaliana]
Length = 225
Score = 133 bits (334), Expect = 3e-29
Identities = 66/91 (72%), Positives = 73/91 (80%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GD+VEIKLEVPEN+RRLS+YKGIVMS+QN VEIVFP+YSPN
Sbjct: 135 IRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPN 194
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 195 IKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 225
>gb|EXC02074.1| 50S ribosomal protein L19-1 [Morus notabilis]
Length = 265
Score = 132 bits (333), Expect = 4e-29
Identities = 67/91 (73%), Positives = 73/91 (80%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GD+VEIKLEVPENRRRLSVYKGIV+S+QN VEIVFPLYSPN
Sbjct: 144 IRTGDIVEIKLEVPENRRRLSVYKGIVISRQNAGIHTTIRIRRIIAGIGVEIVFPLYSPN 203
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKE+KVV+HRKVRRARLYYLRDKLPRLSTFK
Sbjct: 204 IKEIKVVNHRKVRRARLYYLRDKLPRLSTFK 234
>ref|XP_002326473.1| predicted protein [Populus trichocarpa]
gi|566149102|ref|XP_006368958.1| ribosomal protein L19
[Populus trichocarpa] gi|118483873|gb|ABK93827.1|
unknown [Populus trichocarpa]
gi|550347317|gb|ERP65527.1| ribosomal protein L19
[Populus trichocarpa]
Length = 241
Score = 132 bits (333), Expect = 4e-29
Identities = 66/91 (72%), Positives = 72/91 (79%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GD+VEIKLEVPENRRRLS+YKGIV+SKQN VEIVFPLYSPN
Sbjct: 151 IRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAGIHTTIRIRRIIAGIGVEIVFPLYSPN 210
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKE+KV+ HRKVRRARLYYLRDKLPRLSTFK
Sbjct: 211 IKEIKVIKHRKVRRARLYYLRDKLPRLSTFK 241
>dbj|BAA97152.1| unnamed protein product [Arabidopsis thaliana]
Length = 286
Score = 132 bits (332), Expect = 5e-29
Identities = 66/91 (72%), Positives = 73/91 (80%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GD+VEIKLEVPEN+RRLS+YKGIVMS+QN VEIVFP+YSPN
Sbjct: 196 LRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPN 255
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 256 IKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 286
>ref|XP_002863352.1| hypothetical protein ARALYDRAFT_494259 [Arabidopsis lyrata subsp.
lyrata] gi|297309187|gb|EFH39611.1| hypothetical protein
ARALYDRAFT_494259 [Arabidopsis lyrata subsp. lyrata]
Length = 222
Score = 132 bits (332), Expect = 5e-29
Identities = 66/91 (72%), Positives = 73/91 (80%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GD+VEIKLEVPEN+RRLS+YKGIVMS+QN VEIVFP+YSPN
Sbjct: 132 LRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPN 191
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 192 IKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 222
>gb|AAM64533.1| contains similarity to plastid ribosomal protein L19 [Arabidopsis
thaliana]
Length = 229
Score = 132 bits (332), Expect = 5e-29
Identities = 66/91 (72%), Positives = 73/91 (80%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GD+VEIKLEVPEN+RRLS+YKGIVMS+QN VEIVFP+YSPN
Sbjct: 139 LRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPN 198
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 199 IKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 229
>ref|NP_568677.1| 50S ribosomal protein L19-2 [Arabidopsis thaliana]
gi|75247671|sp|Q8RXX5.1|RK192_ARATH RecName: Full=50S
ribosomal protein L19-2, chloroplastic; Flags: Precursor
gi|19347900|gb|AAL85972.1| unknown protein [Arabidopsis
thaliana] gi|21436235|gb|AAM51256.1| unknown protein
[Arabidopsis thaliana] gi|332008099|gb|AED95482.1| 50S
ribosomal protein L19-2 [Arabidopsis thaliana]
Length = 229
Score = 132 bits (332), Expect = 5e-29
Identities = 66/91 (72%), Positives = 73/91 (80%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GD+VEIKLEVPEN+RRLS+YKGIVMS+QN VEIVFP+YSPN
Sbjct: 139 LRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPN 198
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 199 IKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 229
>ref|XP_006281041.1| hypothetical protein CARUB_v10027056mg [Capsella rubella]
gi|482549745|gb|EOA13939.1| hypothetical protein
CARUB_v10027056mg [Capsella rubella]
Length = 230
Score = 132 bits (331), Expect = 6e-29
Identities = 66/91 (72%), Positives = 73/91 (80%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GD+VEIKLEVPENRRRLS+YKGIV+S+QN VEIVFP+YSPN
Sbjct: 140 LRTGDIVEIKLEVPENRRRLSIYKGIVISRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPN 199
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 200 IKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 230
>ref|XP_004245816.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Solanum
lycopersicum]
Length = 214
Score = 132 bits (331), Expect = 6e-29
Identities = 67/91 (73%), Positives = 72/91 (79%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GDVVEIKLEVPENR+RLS+YKGIV+SKQN VEIVFP+YSPN
Sbjct: 124 IRTGDVVEIKLEVPENRKRLSIYKGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPVYSPN 183
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKELKVV HRKVRRARLYYLRDKLPRLSTFK
Sbjct: 184 IKELKVVKHRKVRRARLYYLRDKLPRLSTFK 214
>gb|EOY24209.1| Ribosomal protein L19 family protein [Theobroma cacao]
Length = 242
Score = 131 bits (330), Expect = 8e-29
Identities = 67/91 (73%), Positives = 72/91 (79%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GD+VEIKLEVPENRRRLSVYKGIVMSKQN VEIVFP+YSPN
Sbjct: 152 LRTGDIVEIKLEVPENRRRLSVYKGIVMSKQNAGIHTTIRIRRIIAGIGVEIVFPVYSPN 211
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKE+KVV HRKVRRARLYYLR+KLPRLSTFK
Sbjct: 212 IKEIKVVKHRKVRRARLYYLREKLPRLSTFK 242
>ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloroplastic [Vitis
vinifera] gi|296088907|emb|CBI38456.3| unnamed protein
product [Vitis vinifera]
Length = 231
Score = 131 bits (330), Expect = 8e-29
Identities = 66/91 (72%), Positives = 73/91 (80%)
Frame = +3
Query: 3 VRVGDVVEIKLEVPENRRRLSVYKGIVMSKQNXXXXXXXXXXXXXXXXXVEIVFPLYSPN 182
+R GD+VEIKLEVPENRRRLS+YKGIV+SKQN VEIVFP+YSPN
Sbjct: 141 LRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAGIHTTIRVRRIIAGVGVEIVFPVYSPN 200
Query: 183 IKELKVVSHRKVRRARLYYLRDKLPRLSTFK 275
IKE+KVV+HRKVRRARLYYLRDKLPRLSTFK
Sbjct: 201 IKEIKVVNHRKVRRARLYYLRDKLPRLSTFK 231