BLASTX nr result
ID: Catharanthus22_contig00001010
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00001010
(3834 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containi... 731 0.0
emb|CBI37948.3| unnamed protein product [Vitis vinifera] 731 0.0
gb|EOX97788.1| Pentatricopeptide repeat-containing protein, puta... 735 0.0
ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containi... 739 0.0
ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containi... 739 0.0
ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containi... 728 0.0
ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Popu... 715 0.0
gb|EMJ00876.1| hypothetical protein PRUPE_ppa000631mg [Prunus pe... 713 0.0
ref|XP_002534048.1| pentatricopeptide repeat-containing protein,... 709 0.0
ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containi... 712 0.0
ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containi... 712 0.0
gb|EXB36850.1| hypothetical protein L484_003235 [Morus notabilis] 699 0.0
ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citr... 709 0.0
ref|XP_004292148.1| PREDICTED: pentatricopeptide repeat-containi... 714 0.0
ref|XP_004147063.1| PREDICTED: pentatricopeptide repeat-containi... 677 0.0
ref|XP_006587670.1| PREDICTED: pentatricopeptide repeat-containi... 695 0.0
ref|XP_004505826.1| PREDICTED: pentatricopeptide repeat-containi... 689 0.0
ref|XP_006592076.1| PREDICTED: pentatricopeptide repeat-containi... 681 0.0
ref|XP_003607170.1| Pentatricopeptide repeat-containing protein ... 678 0.0
ref|NP_195209.2| pentatricopeptide repeat protein MRL1 [Arabidop... 644 0.0
>ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Vitis vinifera]
Length = 1115
Score = 731 bits (1887), Expect(3) = 0.0
Identities = 358/504 (71%), Positives = 423/504 (83%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GAVDRAFDVLAEMRAE PIDPDH+TVGAL+KAC AGQVDRAREVYKMID+Y I+GTPE
Sbjct: 611 GAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTPE 670
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIAV+ SQ GDWEFA S+Y DMT KGV PDEMF+SA IDVAGHAG LDAAFE+IQ A
Sbjct: 671 VYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQEA 730
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
R +GI GI++YSSLMGAC NA++WQKAL+LY D+K M + TVS MNAL+TALC+ +QL
Sbjct: 731 RIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQL 790
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
+KA +L ++K+ G+ PNTITYSILLVASEK DD++VGLM+LSQA+KD VAPNLVMCRC+
Sbjct: 791 EKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRCL 850
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
+GMCLRRF+KAC +G+PVLS GR Q+DN+WTS AL +YRE ++AG+ PT E LSQVLG
Sbjct: 851 VGMCLRRFEKACALGEPVLSFNSGRPQIDNKWTSSALMVYRETVSAGVIPTMELLSQVLG 910
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
CL+ P DV+LR+RL+ENLGVS + S+ SN+CSL+DGFGEYD RAFSLLEEAASLG+V V
Sbjct: 911 CLQFPRDVSLRNRLIENLGVSADASRRSNLCSLIDGFGEYDSRAFSLLEEAASLGVVSCV 970
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
S K+SP+IVD R LQ+ AEVYLLTVLKGLKHRLA GAKLP+++ILLP E TQ+ PKGE
Sbjct: 971 SFKKSPVIVDTRRLQIRIAEVYLLTVLKGLKHRLAAGAKLPSMTILLPTETTQVLAPKGE 1030
Query: 3039 KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLG 3218
K IN+AGRISQA+A++LRRLGL Y GNESRGKIR+NG+ ++WFQPKL P +L
Sbjct: 1031 KAINLAGRISQAVASMLRRLGLPYQGNESRGKIRINGLATRRWFQPKLAGPFSGKVDELS 1090
Query: 3219 LSQRRLGKGISFQQRDIRTGNLSL 3290
SQ RLG GIS QQR IRTGNLSL
Sbjct: 1091 SSQSRLGTGISLQQRKIRTGNLSL 1114
Score = 337 bits (865), Expect(3) = 0.0
Identities = 202/459 (44%), Positives = 279/459 (60%), Gaps = 15/459 (3%)
Frame = +2
Query: 437 DLNSYVPVAEEEELVKEMKQINHGHESIVAEMQLVETSAARGANLATSTSELANVNMVAS 616
DL+ E + +++++H + A Q E + + T+TSE + +++++S
Sbjct: 137 DLHKETSEKESRATMDIVEEVSHASKDKEAPWQ--EIALMQEETHVTNTSESSRLDVLSS 194
Query: 617 SVHDFLAMGEXXXXXXXXXXXMQSESDA-PAYTLDRQTCQKRLEDGGQET--GNDSKTQI 787
+ + +++ E + SES + + +LE+ ET G D T +
Sbjct: 195 NAKNCVSVRETEEAGPSILPPLLSESGLLQPLVFATEMPELQLEERQMETEFGYDLSTPV 254
Query: 788 LLIEREQYSASFPEVDLQKGMDVPERSSNEVSKEDEQSCYNFIYRDNLRQDLYTFYEPLK 967
++ + +AS P++ +G++ + +E E + I+RD +R++LYTFYE +
Sbjct: 255 --VQTKSIAASVPDIIALEGVNERKNRGGRPGEESEIISFTGIFRDTIREELYTFYEAKQ 312
Query: 968 A------NVNNLGALPSITSFQE-NGRPSPFKSFTADAAKVFVRSELLHHTESR--EGER 1120
+ N N + L S S + NG ++ T+ A++ ++ H+ + EG+
Sbjct: 313 SVMKPMPNFNGIKTLASNASLLDGNGVSFQMRNATSKEAELSAQNS---HSSADYVEGKM 369
Query: 1121 DLAHYQGDSFNGRKDMEKGKEVPANKETKT--FHQHRPTDSFP-SHNLKRKQIHHLSHQF 1291
L+ Y+ S R D+ KGK P +K + HR FP S+ + K+ +H S +F
Sbjct: 370 SLSCYKEGSSGKRNDLVKGKGFPRDKNGRLPPLSDHRNLSQFPLSNGMTVKEKYHDSEKF 429
Query: 1292 GAYNRLLKDGRLGDCIDLLEDMENKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQN 1471
AYNRLL +GRL DCI LLEDME GLLDM+KVYHA FF+ C+SQKAV EAFRF KLI
Sbjct: 430 SAYNRLLSEGRLSDCIQLLEDMEKMGLLDMDKVYHAKFFKICRSQKAVTEAFRFAKLIPT 489
Query: 1472 PTLSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEV 1651
PTLSTFNMLMSVCA+SQD+ GAFQVLQLV++AGLK DCKLYTTLISTCAKSGKVD MFEV
Sbjct: 490 PTLSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAKSGKVDAMFEV 549
Query: 1652 FHEMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGAYGIM 1768
FHEMVNA VEPN HTYGALIDGC +AGQVAKAFGAYGIM
Sbjct: 550 FHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIM 588
Score = 79.3 bits (194), Expect(3) = 0.0
Identities = 44/106 (41%), Positives = 62/106 (58%)
Frame = +3
Query: 57 FAMEASLSPITSCAAVSSFLYPRCCCVRSLRKEFLGNGHNLRPPGLRSRRKCKNIGFQFQ 236
F+ ++ + SC + S P +LR+EFLG GHNLRPPGLRS +KCKNI +F+
Sbjct: 5 FSAKSQALTLISCTPLYSSPSPSSS-FSTLRREFLGCGHNLRPPGLRSPKKCKNI--RFR 61
Query: 237 VYPSKRFVLRASLDSQSIXXXXXXXXXXXFTVFYLNYSKRKTNSEE 374
+ RF +ASL SQ + F+V +L+YS+R+ NS E
Sbjct: 62 IQSPSRFYFKASLGSQPVLVVVAVAAVFAFSVVFLSYSRRRKNSRE 107
Score = 77.8 bits (190), Expect = 3e-11
Identities = 56/269 (20%), Positives = 118/269 (43%), Gaps = 39/269 (14%)
Frame = +3
Query: 1842 PDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFACSI 2021
P T LM CA + A +V +++ E G++ ++YT ++ C+++G + +
Sbjct: 490 PTLSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAKSGKVDAMFEV 549
Query: 2022 YNDMT-----------------------------------SKGVSPDEMFISAWIDVAGH 2096
+++M SK V PD + +A I G
Sbjct: 550 FHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQ 609
Query: 2097 AGNLDAAFEIIQAARKE--GIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTV 2270
+G +D AF+++ R E I I +L+ AC NA +A ++Y+ + + N+K T
Sbjct: 610 SGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTP 669
Query: 2271 SMMNALLTALCDVDQLQKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQ 2450
+ +++ + + A ++ ++ ++GV P+ + S L+ + L+ ++ +
Sbjct: 670 EVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQE 729
Query: 2451 AKKDGVAPNLVMCRCIIGMC--LRRFQKA 2531
A+ G+ +V ++G C + +QKA
Sbjct: 730 ARIQGIPLGIVSYSSLMGACSNAKNWQKA 758
>emb|CBI37948.3| unnamed protein product [Vitis vinifera]
Length = 1550
Score = 731 bits (1887), Expect(3) = 0.0
Identities = 358/504 (71%), Positives = 423/504 (83%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GAVDRAFDVLAEMRAE PIDPDH+TVGAL+KAC AGQVDRAREVYKMID+Y I+GTPE
Sbjct: 1046 GAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTPE 1105
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIAV+ SQ GDWEFA S+Y DMT KGV PDEMF+SA IDVAGHAG LDAAFE+IQ A
Sbjct: 1106 VYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQEA 1165
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
R +GI GI++YSSLMGAC NA++WQKAL+LY D+K M + TVS MNAL+TALC+ +QL
Sbjct: 1166 RIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQL 1225
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
+KA +L ++K+ G+ PNTITYSILLVASEK DD++VGLM+LSQA+KD VAPNLVMCRC+
Sbjct: 1226 EKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRCL 1285
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
+GMCLRRF+KAC +G+PVLS GR Q+DN+WTS AL +YRE ++AG+ PT E LSQVLG
Sbjct: 1286 VGMCLRRFEKACALGEPVLSFNSGRPQIDNKWTSSALMVYRETVSAGVIPTMELLSQVLG 1345
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
CL+ P DV+LR+RL+ENLGVS + S+ SN+CSL+DGFGEYD RAFSLLEEAASLG+V V
Sbjct: 1346 CLQFPRDVSLRNRLIENLGVSADASRRSNLCSLIDGFGEYDSRAFSLLEEAASLGVVSCV 1405
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
S K+SP+IVD R LQ+ AEVYLLTVLKGLKHRLA GAKLP+++ILLP E TQ+ PKGE
Sbjct: 1406 SFKKSPVIVDTRRLQIRIAEVYLLTVLKGLKHRLAAGAKLPSMTILLPTETTQVLAPKGE 1465
Query: 3039 KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLG 3218
K IN+AGRISQA+A++LRRLGL Y GNESRGKIR+NG+ ++WFQPKL P +L
Sbjct: 1466 KAINLAGRISQAVASMLRRLGLPYQGNESRGKIRINGLATRRWFQPKLAGPFSGKVDELS 1525
Query: 3219 LSQRRLGKGISFQQRDIRTGNLSL 3290
SQ RLG GIS QQR IRTGNLSL
Sbjct: 1526 SSQSRLGTGISLQQRKIRTGNLSL 1549
Score = 337 bits (865), Expect(3) = 0.0
Identities = 202/459 (44%), Positives = 279/459 (60%), Gaps = 15/459 (3%)
Frame = +2
Query: 437 DLNSYVPVAEEEELVKEMKQINHGHESIVAEMQLVETSAARGANLATSTSELANVNMVAS 616
DL+ E + +++++H + A Q E + + T+TSE + +++++S
Sbjct: 572 DLHKETSEKESRATMDIVEEVSHASKDKEAPWQ--EIALMQEETHVTNTSESSRLDVLSS 629
Query: 617 SVHDFLAMGEXXXXXXXXXXXMQSESDA-PAYTLDRQTCQKRLEDGGQET--GNDSKTQI 787
+ + +++ E + SES + + +LE+ ET G D T +
Sbjct: 630 NAKNCVSVRETEEAGPSILPPLLSESGLLQPLVFATEMPELQLEERQMETEFGYDLSTPV 689
Query: 788 LLIEREQYSASFPEVDLQKGMDVPERSSNEVSKEDEQSCYNFIYRDNLRQDLYTFYEPLK 967
++ + +AS P++ +G++ + +E E + I+RD +R++LYTFYE +
Sbjct: 690 --VQTKSIAASVPDIIALEGVNERKNRGGRPGEESEIISFTGIFRDTIREELYTFYEAKQ 747
Query: 968 A------NVNNLGALPSITSFQE-NGRPSPFKSFTADAAKVFVRSELLHHTESR--EGER 1120
+ N N + L S S + NG ++ T+ A++ ++ H+ + EG+
Sbjct: 748 SVMKPMPNFNGIKTLASNASLLDGNGVSFQMRNATSKEAELSAQNS---HSSADYVEGKM 804
Query: 1121 DLAHYQGDSFNGRKDMEKGKEVPANKETKT--FHQHRPTDSFP-SHNLKRKQIHHLSHQF 1291
L+ Y+ S R D+ KGK P +K + HR FP S+ + K+ +H S +F
Sbjct: 805 SLSCYKEGSSGKRNDLVKGKGFPRDKNGRLPPLSDHRNLSQFPLSNGMTVKEKYHDSEKF 864
Query: 1292 GAYNRLLKDGRLGDCIDLLEDMENKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQN 1471
AYNRLL +GRL DCI LLEDME GLLDM+KVYHA FF+ C+SQKAV EAFRF KLI
Sbjct: 865 SAYNRLLSEGRLSDCIQLLEDMEKMGLLDMDKVYHAKFFKICRSQKAVTEAFRFAKLIPT 924
Query: 1472 PTLSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEV 1651
PTLSTFNMLMSVCA+SQD+ GAFQVLQLV++AGLK DCKLYTTLISTCAKSGKVD MFEV
Sbjct: 925 PTLSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAKSGKVDAMFEV 984
Query: 1652 FHEMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGAYGIM 1768
FHEMVNA VEPN HTYGALIDGC +AGQVAKAFGAYGIM
Sbjct: 985 FHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIM 1023
Score = 33.5 bits (75), Expect(3) = 0.0
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 252 RFVLRASLDSQSIXXXXXXXXXXXFTVFYLNYSKRKTNSEE 374
RF +ASL SQ + F+V +L+YS+R+ NS E
Sbjct: 502 RFYFKASLGSQPVLVVVAVAAVFAFSVVFLSYSRRRKNSRE 542
Score = 77.8 bits (190), Expect = 3e-11
Identities = 56/269 (20%), Positives = 118/269 (43%), Gaps = 39/269 (14%)
Frame = +3
Query: 1842 PDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFACSI 2021
P T LM CA + A +V +++ E G++ ++YT ++ C+++G + +
Sbjct: 925 PTLSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAKSGKVDAMFEV 984
Query: 2022 YNDMT-----------------------------------SKGVSPDEMFISAWIDVAGH 2096
+++M SK V PD + +A I G
Sbjct: 985 FHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQ 1044
Query: 2097 AGNLDAAFEIIQAARKE--GIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTV 2270
+G +D AF+++ R E I I +L+ AC NA +A ++Y+ + + N+K T
Sbjct: 1045 SGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTP 1104
Query: 2271 SMMNALLTALCDVDQLQKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQ 2450
+ +++ + + A ++ ++ ++GV P+ + S L+ + L+ ++ +
Sbjct: 1105 EVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQE 1164
Query: 2451 AKKDGVAPNLVMCRCIIGMC--LRRFQKA 2531
A+ G+ +V ++G C + +QKA
Sbjct: 1165 ARIQGIPLGIVSYSSLMGACSNAKNWQKA 1193
>gb|EOX97788.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 1110
Score = 735 bits (1897), Expect(2) = 0.0
Identities = 358/504 (71%), Positives = 429/504 (85%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GAVDRAFDVLAEM AE PIDPDHVTVGAL+KAC+ A QVDRAREVYKMI E+ I+GTPE
Sbjct: 606 GAVDRAFDVLAEMMAETQPIDPDHVTVGALIKACSNADQVDRAREVYKMIHEFSIKGTPE 665
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIAVNCCSQTGDWEFACS+Y+DM KGV+PDE+FISA IDVAGHAG LDAAFEI++ A
Sbjct: 666 VYTIAVNCCSQTGDWEFACSVYSDMKGKGVAPDEVFISALIDVAGHAGKLDAAFEILEEA 725
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
+ +GI+ GI++YSSLMGAC NAR+WQKAL+LYE++K + + LTVS +NAL+T+LC+ DQL
Sbjct: 726 KNQGINVGIVSYSSLMGACSNARNWQKALELYENIKAVKLNLTVSTVNALITSLCEADQL 785
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
KA IL E+++ G+ PNT+TYSILLVASE+ DDLEVGLMLLSQA+KDGVAPNL+M RCI
Sbjct: 786 PKAMEILSEMEELGLCPNTVTYSILLVASERKDDLEVGLMLLSQARKDGVAPNLIMARCI 845
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
IGMCLRRF+KAC VG+PVLS G+ ++N+WTS AL +YRE I AG APT + +SQ+LG
Sbjct: 846 IGMCLRRFEKACKVGEPVLSFNSGQPHIENKWTSVALAVYRETIVAGTAPTMDVISQILG 905
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
CL+LP D +L+ RLVENL VS + ++ S++ SL+DGFGEYDPRAFSLLEEAAS GIVP V
Sbjct: 906 CLQLPRDDSLKSRLVENLDVSADATRCSSLSSLIDGFGEYDPRAFSLLEEAASFGIVPCV 965
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
S K+SPI+VD R LQ++ AEVYLLT+LKGLKHR A GAKLP++S+LLPLEKTQ+ TP+ E
Sbjct: 966 SFKESPIVVDARELQINMAEVYLLTILKGLKHRRAAGAKLPSISVLLPLEKTQVLTPERE 1025
Query: 3039 KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLG 3218
K+IN+AGRI QAIAALLRR+GL Y GNES GKIR+NG+ +K+WFQPKL SP P +
Sbjct: 1026 KSINLAGRIGQAIAALLRRIGLPYQGNESFGKIRINGLALKRWFQPKLASPFTGKPGEWN 1085
Query: 3219 LSQRRLGKGISFQQRDIRTGNLSL 3290
SQ RLGKGIS QQR+IRTGNLSL
Sbjct: 1086 ASQMRLGKGISHQQRNIRTGNLSL 1109
Score = 317 bits (813), Expect(2) = 0.0
Identities = 200/457 (43%), Positives = 273/457 (59%), Gaps = 23/457 (5%)
Frame = +2
Query: 467 EEELVKEMKQINHGHESIVAEMQLVETSAARGANLATSTSELANVNMVASSVHDFLAMGE 646
+++L +E+K+ + ES A +Q ET+ A +L TS+ + + +A + + F
Sbjct: 151 KDDLKEEIKEATYASESKEALLQFQETTVANDDSLLHKTSDSSGADCLAVTANGF----- 205
Query: 647 XXXXXXXXXXXMQSESDAPAYTLDRQTCQKRLEDGGQE----TGNDSKTQILLIER-EQY 811
+ ES A L LE G E S+ + +ER ++
Sbjct: 206 ----------DVSEESGATDLPLPPTVL---LESGAVEPLMFAAEMSELHLEEVERVNEF 252
Query: 812 SASFPEVDLQKGMDVPERSSNEVSKED--------EQSCYNFIYRDNLRQDLYTFYEP-- 961
A P + ++ PE S++ V +D E + + I+++++R++L+TFYE
Sbjct: 253 EADLPRLAVE-----PESSASSVLVKDAHVLVGEGEVTRHYDIFKESVREELHTFYEADQ 307
Query: 962 --LKANVNNLGALPS---ITSFQENGRPSPFKSFTADAAKVFVRSELLHHTESREGERDL 1126
K++ N G P+ + S N S ++ A++ ++ L + EG+
Sbjct: 308 LVAKSSTNLNGLKPASSRVFSPNSNSFSSLMQNSELKRAQLSSKN-CLQTADMAEGKVAQ 366
Query: 1127 AHYQGDSFNGRKDMEKGKEVPANKETKTFHQHRPTD--SFPSHN-LKRKQIHHLSHQFGA 1297
A S + R+D +G+E+P +K + Q + T FP N + H F +
Sbjct: 367 ACSNRVSSHKRQDFGRGREIPRDKGKRHSIQEKNTKLPKFPFPNGMLADNKHRPEDHFRS 426
Query: 1298 YNRLLKDGRLGDCIDLLEDMENKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQNPT 1477
YNRLL+DGRL DC+DLLEDME +GLLDMNKVYHA FF+ C QKAVKEAF FTKLI NPT
Sbjct: 427 YNRLLRDGRLSDCVDLLEDMEQRGLLDMNKVYHAKFFKICNRQKAVKEAFCFTKLIPNPT 486
Query: 1478 LSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEVFH 1657
LSTFNMLMSVCASSQD++GAF+VL++VQ+AG K DCKLYTTLISTCAKSGKVDTMFEVFH
Sbjct: 487 LSTFNMLMSVCASSQDSDGAFEVLRIVQEAGFKADCKLYTTLISTCAKSGKVDTMFEVFH 546
Query: 1658 EMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGAYGIM 1768
EMVN+GVEPN +TYGALIDGCA+AGQVAKAFGAYGIM
Sbjct: 547 EMVNSGVEPNVNTYGALIDGCARAGQVAKAFGAYGIM 583
Score = 87.4 bits (215), Expect = 4e-14
Identities = 59/270 (21%), Positives = 116/270 (42%), Gaps = 39/270 (14%)
Frame = +3
Query: 1839 DPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFACS 2018
+P T LM CA + D A EV +++ E G + ++YT ++ C+++G +
Sbjct: 484 NPTLSTFNMLMSVCASSQDSDGAFEVLRIVQEAGFKADCKLYTTLISTCAKSGKVDTMFE 543
Query: 2019 IYNDMTSKG-----------------------------------VSPDEMFISAWIDVAG 2093
++++M + G V PD + +A I G
Sbjct: 544 VFHEMVNSGVEPNVNTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 603
Query: 2094 HAGNLDAAFEII--QAARKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLT 2267
+G +D AF+++ A + I + +L+ AC NA +A ++Y+ + E ++K T
Sbjct: 604 QSGAVDRAFDVLAEMMAETQPIDPDHVTVGALIKACSNADQVDRAREVYKMIHEFSIKGT 663
Query: 2268 VSMMNALLTALCDVDQLQKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLS 2447
+ + + A ++ ++K +GV P+ + S L+ + L+ +L
Sbjct: 664 PEVYTIAVNCCSQTGDWEFACSVYSDMKGKGVAPDEVFISALIDVAGHAGKLDAAFEILE 723
Query: 2448 QAKKDGVAPNLVMCRCIIGMC--LRRFQKA 2531
+AK G+ +V ++G C R +QKA
Sbjct: 724 EAKNQGINVGIVSYSSLMGACSNARNWQKA 753
>ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 1140
Score = 739 bits (1908), Expect(2) = 0.0
Identities = 364/504 (72%), Positives = 426/504 (84%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GAVDRAFDVL+EM+AE PI+PD +T+GALMKACA AGQVDRA EVY+MID+ I+GTPE
Sbjct: 636 GAVDRAFDVLSEMKAEARPIEPDQITIGALMKACANAGQVDRALEVYRMIDKCDIKGTPE 695
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIAVNCCSQ G+WEFA SIY+DM+ KGV+PDEMFISA IDVAGH G L+AAFE+++ A
Sbjct: 696 VYTIAVNCCSQNGNWEFARSIYDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEA 755
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
R +GI+ G I+YSSLMGACCNA++WQKAL+LYED+K +N+K TVSMMNAL+TALC DQ
Sbjct: 756 RTKGINLGSISYSSLMGACCNAQNWQKALELYEDIKGINLKPTVSMMNALITALCYADQY 815
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
QKA I E+KK + PNTITYS LLVASEK DDL+VGLMLLS AKKDGVAPNLVMCRC+
Sbjct: 816 QKALEIFSEMKKVDLCPNTITYSTLLVASEKKDDLDVGLMLLSHAKKDGVAPNLVMCRCL 875
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
+ MC RRFQKAC +G+PVLS GRLQLD++WTS AL +YRE I AG+ PT EELS VLG
Sbjct: 876 LAMCSRRFQKACTLGEPVLSNNSGRLQLDSKWTSLALMVYRETIGAGVVPTIEELSLVLG 935
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
CL+LP D +L++RL+ENLG++ SKGSN+CSL+DGFGEYDPRA SLLEEAASLGIVP
Sbjct: 936 CLQLPCDASLKERLIENLGLTVETSKGSNLCSLIDGFGEYDPRACSLLEEAASLGIVPLT 995
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
S K SPI+VDVRNL +H A+VYLLTVLK LKHRLA GAK+PN+SILLP+E++ IQTP GE
Sbjct: 996 SFKGSPIVVDVRNLHIHAAQVYLLTVLKSLKHRLAAGAKIPNISILLPVEQSHIQTPTGE 1055
Query: 3039 KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLG 3218
KTI IAGRI++A+AALLRRLGL Y GNES GKIR+NGV+VK+WFQPKL+SP D
Sbjct: 1056 KTIKIAGRINRAVAALLRRLGLPYQGNESFGKIRINGVIVKRWFQPKLESPFSWEQTDFS 1115
Query: 3219 LSQRRLGKGISFQQRDIRTGNLSL 3290
SQ RL KGIS QQR IRTG+LSL
Sbjct: 1116 FSQTRLRKGISHQQRTIRTGDLSL 1139
Score = 306 bits (783), Expect(2) = 0.0
Identities = 184/377 (48%), Positives = 234/377 (62%), Gaps = 16/377 (4%)
Frame = +2
Query: 686 SESDAPAYTLDRQTCQKRLEDGGQETGNDSKTQILLIEREQYSASFPEVDLQKGMDVPER 865
+ESDA + ++ L++ ET + + E+ A FP +++ + ++
Sbjct: 251 TESDAVPSSFVEESKNICLQEHLHETKMSNILTTEEVSSERSVALFPAINIDNRPEKTKK 310
Query: 866 SSNEVSK------------EDEQSCYNFIYRDNLRQDLYTFYEPLKANVNNLGALPSITS 1009
E+ EDE + +N I+RD+ R+DLY+F+E ++N AL S S
Sbjct: 311 MDQELMTKDGCKKAHKFVAEDEVTIHNLIFRDSTREDLYSFFEASSKSLNGQDALTSHAS 370
Query: 1010 FQENGRPSPFKSFTADAAKVF-VRSELLHHTESREGERDLAHYQGDSFNGRKDMEKGKEV 1186
Q G SP A+KVF VR+E E +R Y+ FN +KD K +
Sbjct: 371 LQGIGAFSP-------ASKVFSVRAE------DFEEKRSHGCYKEGPFN-KKDFLKRMQH 416
Query: 1187 PANKETKTFHQHRPTDSFPSHNLKRKQI---HHLSHQFGAYNRLLKDGRLGDCIDLLEDM 1357
NKE + + N K Q+ + S QF Y L++GRL DCI++LEDM
Sbjct: 417 FTNKEKSILPDNGASKQLQIPNPKGIQVCDRPNPSDQFRDYRHFLREGRLMDCIEILEDM 476
Query: 1358 ENKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGA 1537
G L+M+KVYHAGFF+ CKSQKAVKEAFRFTKLI+NPTLSTFNML++VCASS+D E A
Sbjct: 477 GRHGSLNMDKVYHAGFFQVCKSQKAVKEAFRFTKLIRNPTLSTFNMLLTVCASSRDLERA 536
Query: 1538 FQVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDG 1717
FQV QLV++ GLK DCKLYTTLISTCAK+GKVDTMFEVFHEMVNAGVEPN +TYG LIDG
Sbjct: 537 FQVFQLVRETGLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNANTYGTLIDG 596
Query: 1718 CAKAGQVAKAFGAYGIM 1768
CAKAGQVAKAFGAYGIM
Sbjct: 597 CAKAGQVAKAFGAYGIM 613
Score = 102 bits (254), Expect = 1e-18
Identities = 80/322 (24%), Positives = 143/322 (44%), Gaps = 14/322 (4%)
Frame = +3
Query: 1785 VDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVY 1964
++RAF V +R + PD L+ CAKAG+VD EV+ + G+ Y
Sbjct: 533 LERAFQVFQLVRET--GLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNANTY 590
Query: 1965 TIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAARK 2144
++ C++ G A Y M SK V PD + +A I G +G +D AF+++ +
Sbjct: 591 GTLIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLSEMKA 650
Query: 2145 EG--IHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
E I I +LM AC NA +AL++Y + + ++K T + +
Sbjct: 651 EARPIEPDQITIGALMKACANAGQVDRALEVYRMIDKCDIKGTPEVYTIAVNCCSQNGNW 710
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
+ A +I ++ K+GV P+ + S L+ + LE +L +A+ G+ + +
Sbjct: 711 EFARSIYDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEARTKGINLGSISYSSL 770
Query: 2499 IGMC--LRRFQKACIVGDPV--LSLTPGRLQLDNQWTSF--------ALRIYREAIAAGL 2642
+G C + +QKA + + + ++L P ++ T+ AL I+ E L
Sbjct: 771 MGACCNAQNWQKALELYEDIKGINLKPTVSMMNALITALCYADQYQKALEIFSEMKKVDL 830
Query: 2643 APTAEELSQVLGCLKLPHDVNL 2708
P S +L + D+++
Sbjct: 831 CPNTITYSTLLVASEKKDDLDV 852
Score = 79.7 bits (195), Expect = 9e-12
Identities = 50/110 (45%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Frame = +3
Query: 51 SKFAMEASLSPITSCAAVSSFLYPRCCCVRSLRKEFL-GNGHNLRPPGLRSRRKCKNIGF 227
S F+ + + SC+ +SS L PR ++FL G+ H+LRPPGL SRR+C+NIGF
Sbjct: 3 SIFSPKPHTLSLLSCSPISSSLVPR--------RQFLSGSTHSLRPPGLHSRRRCRNIGF 54
Query: 228 QFQVYPSKRFVLRASLDSQSIXXXXXXXXXXXFTVFYLNYSKRKTNSEEK 377
QF S RFVLRASLDSQ++ TV +L +SKR TN+ K
Sbjct: 55 QFGSNTS-RFVLRASLDSQTV-VFASVVTISALTVVFLEFSKRNTNANAK 102
>ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like isoform X2 [Solanum tuberosum]
Length = 1109
Score = 739 bits (1908), Expect(2) = 0.0
Identities = 364/504 (72%), Positives = 426/504 (84%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GAVDRAFDVL+EM+AE PI+PD +T+GALMKACA AGQVDRA EVY+MID+ I+GTPE
Sbjct: 605 GAVDRAFDVLSEMKAEARPIEPDQITIGALMKACANAGQVDRALEVYRMIDKCDIKGTPE 664
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIAVNCCSQ G+WEFA SIY+DM+ KGV+PDEMFISA IDVAGH G L+AAFE+++ A
Sbjct: 665 VYTIAVNCCSQNGNWEFARSIYDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEA 724
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
R +GI+ G I+YSSLMGACCNA++WQKAL+LYED+K +N+K TVSMMNAL+TALC DQ
Sbjct: 725 RTKGINLGSISYSSLMGACCNAQNWQKALELYEDIKGINLKPTVSMMNALITALCYADQY 784
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
QKA I E+KK + PNTITYS LLVASEK DDL+VGLMLLS AKKDGVAPNLVMCRC+
Sbjct: 785 QKALEIFSEMKKVDLCPNTITYSTLLVASEKKDDLDVGLMLLSHAKKDGVAPNLVMCRCL 844
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
+ MC RRFQKAC +G+PVLS GRLQLD++WTS AL +YRE I AG+ PT EELS VLG
Sbjct: 845 LAMCSRRFQKACTLGEPVLSNNSGRLQLDSKWTSLALMVYRETIGAGVVPTIEELSLVLG 904
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
CL+LP D +L++RL+ENLG++ SKGSN+CSL+DGFGEYDPRA SLLEEAASLGIVP
Sbjct: 905 CLQLPCDASLKERLIENLGLTVETSKGSNLCSLIDGFGEYDPRACSLLEEAASLGIVPLT 964
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
S K SPI+VDVRNL +H A+VYLLTVLK LKHRLA GAK+PN+SILLP+E++ IQTP GE
Sbjct: 965 SFKGSPIVVDVRNLHIHAAQVYLLTVLKSLKHRLAAGAKIPNISILLPVEQSHIQTPTGE 1024
Query: 3039 KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLG 3218
KTI IAGRI++A+AALLRRLGL Y GNES GKIR+NGV+VK+WFQPKL+SP D
Sbjct: 1025 KTIKIAGRINRAVAALLRRLGLPYQGNESFGKIRINGVIVKRWFQPKLESPFSWEQTDFS 1084
Query: 3219 LSQRRLGKGISFQQRDIRTGNLSL 3290
SQ RL KGIS QQR IRTG+LSL
Sbjct: 1085 FSQTRLRKGISHQQRTIRTGDLSL 1108
Score = 306 bits (783), Expect(2) = 0.0
Identities = 184/377 (48%), Positives = 234/377 (62%), Gaps = 16/377 (4%)
Frame = +2
Query: 686 SESDAPAYTLDRQTCQKRLEDGGQETGNDSKTQILLIEREQYSASFPEVDLQKGMDVPER 865
+ESDA + ++ L++ ET + + E+ A FP +++ + ++
Sbjct: 220 TESDAVPSSFVEESKNICLQEHLHETKMSNILTTEEVSSERSVALFPAINIDNRPEKTKK 279
Query: 866 SSNEVSK------------EDEQSCYNFIYRDNLRQDLYTFYEPLKANVNNLGALPSITS 1009
E+ EDE + +N I+RD+ R+DLY+F+E ++N AL S S
Sbjct: 280 MDQELMTKDGCKKAHKFVAEDEVTIHNLIFRDSTREDLYSFFEASSKSLNGQDALTSHAS 339
Query: 1010 FQENGRPSPFKSFTADAAKVF-VRSELLHHTESREGERDLAHYQGDSFNGRKDMEKGKEV 1186
Q G SP A+KVF VR+E E +R Y+ FN +KD K +
Sbjct: 340 LQGIGAFSP-------ASKVFSVRAE------DFEEKRSHGCYKEGPFN-KKDFLKRMQH 385
Query: 1187 PANKETKTFHQHRPTDSFPSHNLKRKQI---HHLSHQFGAYNRLLKDGRLGDCIDLLEDM 1357
NKE + + N K Q+ + S QF Y L++GRL DCI++LEDM
Sbjct: 386 FTNKEKSILPDNGASKQLQIPNPKGIQVCDRPNPSDQFRDYRHFLREGRLMDCIEILEDM 445
Query: 1358 ENKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGA 1537
G L+M+KVYHAGFF+ CKSQKAVKEAFRFTKLI+NPTLSTFNML++VCASS+D E A
Sbjct: 446 GRHGSLNMDKVYHAGFFQVCKSQKAVKEAFRFTKLIRNPTLSTFNMLLTVCASSRDLERA 505
Query: 1538 FQVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDG 1717
FQV QLV++ GLK DCKLYTTLISTCAK+GKVDTMFEVFHEMVNAGVEPN +TYG LIDG
Sbjct: 506 FQVFQLVRETGLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNANTYGTLIDG 565
Query: 1718 CAKAGQVAKAFGAYGIM 1768
CAKAGQVAKAFGAYGIM
Sbjct: 566 CAKAGQVAKAFGAYGIM 582
Score = 102 bits (254), Expect = 1e-18
Identities = 80/322 (24%), Positives = 143/322 (44%), Gaps = 14/322 (4%)
Frame = +3
Query: 1785 VDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVY 1964
++RAF V +R + PD L+ CAKAG+VD EV+ + G+ Y
Sbjct: 502 LERAFQVFQLVRET--GLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNANTY 559
Query: 1965 TIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAARK 2144
++ C++ G A Y M SK V PD + +A I G +G +D AF+++ +
Sbjct: 560 GTLIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLSEMKA 619
Query: 2145 EG--IHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
E I I +LM AC NA +AL++Y + + ++K T + +
Sbjct: 620 EARPIEPDQITIGALMKACANAGQVDRALEVYRMIDKCDIKGTPEVYTIAVNCCSQNGNW 679
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
+ A +I ++ K+GV P+ + S L+ + LE +L +A+ G+ + +
Sbjct: 680 EFARSIYDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEARTKGINLGSISYSSL 739
Query: 2499 IGMC--LRRFQKACIVGDPV--LSLTPGRLQLDNQWTSF--------ALRIYREAIAAGL 2642
+G C + +QKA + + + ++L P ++ T+ AL I+ E L
Sbjct: 740 MGACCNAQNWQKALELYEDIKGINLKPTVSMMNALITALCYADQYQKALEIFSEMKKVDL 799
Query: 2643 APTAEELSQVLGCLKLPHDVNL 2708
P S +L + D+++
Sbjct: 800 CPNTITYSTLLVASEKKDDLDV 821
Score = 79.7 bits (195), Expect = 9e-12
Identities = 50/110 (45%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Frame = +3
Query: 51 SKFAMEASLSPITSCAAVSSFLYPRCCCVRSLRKEFL-GNGHNLRPPGLRSRRKCKNIGF 227
S F+ + + SC+ +SS L PR ++FL G+ H+LRPPGL SRR+C+NIGF
Sbjct: 3 SIFSPKPHTLSLLSCSPISSSLVPR--------RQFLSGSTHSLRPPGLHSRRRCRNIGF 54
Query: 228 QFQVYPSKRFVLRASLDSQSIXXXXXXXXXXXFTVFYLNYSKRKTNSEEK 377
QF S RFVLRASLDSQ++ TV +L +SKR TN+ K
Sbjct: 55 QFGSNTS-RFVLRASLDSQTV-VFASVVTISALTVVFLEFSKRNTNANAK 102
>ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Solanum lycopersicum]
Length = 1182
Score = 728 bits (1880), Expect(2) = 0.0
Identities = 356/504 (70%), Positives = 424/504 (84%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GAVDRAFDVL+EM+AE PI+PD +T+GALMKACA +GQVDRA EVY+MID+ I+GTPE
Sbjct: 678 GAVDRAFDVLSEMKAEARPIEPDQITIGALMKACANSGQVDRALEVYRMIDKCDIKGTPE 737
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIAVNCCSQ G+WEFA SIY+DM+ KGV+PDEMFISA IDVAGH G L+AAFE+++ A
Sbjct: 738 VYTIAVNCCSQNGNWEFARSIYDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEA 797
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
R +GI+ G I+YSSLMGACCNA++WQKAL+LYED+K +N+K TVSMMNAL+TALC DQ
Sbjct: 798 RAKGINLGSISYSSLMGACCNAKNWQKALELYEDIKGINLKPTVSMMNALITALCYADQY 857
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
QKA I E+K+ + PNTITYS LLVASEK DDL+VGLMLLS AKKDGVAPNLVMCRC+
Sbjct: 858 QKALEIFSEMKRVDLCPNTITYSTLLVASEKKDDLDVGLMLLSHAKKDGVAPNLVMCRCL 917
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
+ MC RRFQKAC +G+PVLS GRLQLD++WTS AL +YRE I AG+ PT EELS VLG
Sbjct: 918 LAMCSRRFQKACTLGEPVLSNNSGRLQLDSKWTSLALMVYRETIGAGVVPTIEELSLVLG 977
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
CL+LP D ++++RL+ENLG++ SKGSN+CSL+DGFGEYDPRA SLLEEAASLGIVP
Sbjct: 978 CLQLPRDASIKERLIENLGLTVETSKGSNLCSLIDGFGEYDPRACSLLEEAASLGIVPLT 1037
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
S K SPI+VDVRNL +H A+VYLLTVLK LKHRLA GAK+PN+SI+LP+E++ IQTP G+
Sbjct: 1038 SFKGSPIVVDVRNLHIHAAQVYLLTVLKSLKHRLAAGAKIPNISIVLPVEQSHIQTPTGQ 1097
Query: 3039 KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLG 3218
KTI IAGRI++A+AALLRRL L Y GNES GKIR+NGV++K+WFQPKL+SP
Sbjct: 1098 KTIKIAGRINRAVAALLRRLRLPYQGNESFGKIRINGVIMKRWFQPKLESPFSWEQTGFS 1157
Query: 3219 LSQRRLGKGISFQQRDIRTGNLSL 3290
SQ RL KGIS QQR IRTG+LSL
Sbjct: 1158 FSQTRLRKGISHQQRTIRTGDLSL 1181
Score = 311 bits (796), Expect(2) = 0.0
Identities = 189/377 (50%), Positives = 234/377 (62%), Gaps = 16/377 (4%)
Frame = +2
Query: 686 SESDAPAYTLDRQTCQKRLEDGGQETGNDSKTQILLIEREQYSASFPEVDLQ------KG 847
+ESDA + ++ L++ ET + + E+ A FP +++ K
Sbjct: 293 TESDAVPSSFMEESKNINLQEHLHETKMSNILTTEEVSSERSVALFPTINIDNRTEKTKI 352
Query: 848 MDVPERSSNEVSK------EDEQSCYNFIYRDNLRQDLYTFYEPLKANVNNLGALPSITS 1009
MD +E+ K EDE +N I+RD+ R+DLY+F+ ++N AL S S
Sbjct: 353 MDQELMMKDELKKAHRFVAEDEVIIHNLIFRDSTREDLYSFFGASSKSLNGQDALTSHAS 412
Query: 1010 FQENGRPSP-FKSFTADAAKVFVRSELLHHTESREGERDLAHYQGDSFNGRKDMEKGKEV 1186
Q G SP K+F+ A E E +R Y+ FN ++D K +
Sbjct: 413 RQGIGTFSPPSKAFSVRA-------------EDFEEKRSHGCYKERPFN-KEDFVKRMQQ 458
Query: 1187 PANKETKTFHQHRPTDSFPSHNLKRKQI---HHLSHQFGAYNRLLKDGRLGDCIDLLEDM 1357
NKE + + N K Q+ + S QF AY L++GRL DCI +LEDM
Sbjct: 459 FTNKEKSILSDNGASKQLQVSNPKSIQVCDRPNPSDQFRAYRHFLREGRLMDCIKILEDM 518
Query: 1358 ENKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGA 1537
E G L+M+KVYHAGFF+ CKSQKAVKEAFRFTKLIQNPTLSTFNML+SVCASS+D E A
Sbjct: 519 ERHGSLNMDKVYHAGFFQVCKSQKAVKEAFRFTKLIQNPTLSTFNMLLSVCASSRDLERA 578
Query: 1538 FQVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDG 1717
FQVLQLV++ GLK DCKLYTTLISTCAK+GKVDTMFEVFHEMVNAGVEPN +TYGALIDG
Sbjct: 579 FQVLQLVRETGLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNANTYGALIDG 638
Query: 1718 CAKAGQVAKAFGAYGIM 1768
CAKAGQVAKAFGAYGIM
Sbjct: 639 CAKAGQVAKAFGAYGIM 655
Score = 103 bits (256), Expect = 8e-19
Identities = 80/322 (24%), Positives = 144/322 (44%), Gaps = 14/322 (4%)
Frame = +3
Query: 1785 VDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVY 1964
++RAF VL +R + PD L+ CAKAG+VD EV+ + G+ Y
Sbjct: 575 LERAFQVLQLVRET--GLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNANTY 632
Query: 1965 TIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAARK 2144
++ C++ G A Y M SK V PD + +A I G +G +D AF+++ +
Sbjct: 633 GALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLSEMKA 692
Query: 2145 EG--IHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
E I I +LM AC N+ +AL++Y + + ++K T + +
Sbjct: 693 EARPIEPDQITIGALMKACANSGQVDRALEVYRMIDKCDIKGTPEVYTIAVNCCSQNGNW 752
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
+ A +I ++ K+GV P+ + S L+ + LE +L +A+ G+ + +
Sbjct: 753 EFARSIYDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEARAKGINLGSISYSSL 812
Query: 2499 IGMC--LRRFQKACIVGDPV--LSLTPGRLQLDNQWTSF--------ALRIYREAIAAGL 2642
+G C + +QKA + + + ++L P ++ T+ AL I+ E L
Sbjct: 813 MGACCNAKNWQKALELYEDIKGINLKPTVSMMNALITALCYADQYQKALEIFSEMKRVDL 872
Query: 2643 APTAEELSQVLGCLKLPHDVNL 2708
P S +L + D+++
Sbjct: 873 CPNTITYSTLLVASEKKDDLDV 894
Score = 80.1 bits (196), Expect = 7e-12
Identities = 51/109 (46%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
Frame = +3
Query: 63 MEASLSP---ITSCAAVSSFLYPRCCCVRSLRKEFL-GNGHNLRPPGLRSRRKCKNIGFQ 230
M++ SP + SC+ +SS L PR ++FL G+ H+LRPPGL SRR+C+NIGFQ
Sbjct: 1 MDSIFSPKLSLLSCSPISSSLVPR--------RQFLSGSTHSLRPPGLHSRRRCRNIGFQ 52
Query: 231 FQVYPSKRFVLRASLDSQSIXXXXXXXXXXXFTVFYLNYSKRKTNSEEK 377
F S RFVLRASLDSQ++ TV +L +SKR TN+ K
Sbjct: 53 FGGNTS-RFVLRASLDSQTV-VFASVVTISALTVVFLEFSKRNTNANAK 99
>ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Populus trichocarpa]
gi|550341229|gb|EEE86674.2| hypothetical protein
POPTR_0004s17400g [Populus trichocarpa]
Length = 1104
Score = 715 bits (1845), Expect(2) = 0.0
Identities = 349/504 (69%), Positives = 414/504 (82%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GAVDRAFDVLAEM E PIDPDH+TVGAL+KAC AGQVDRA+EVY M+ +Y I+GTPE
Sbjct: 600 GAVDRAFDVLAEMTGEAQPIDPDHITVGALIKACTNAGQVDRAQEVYNMVHKYNIKGTPE 659
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIA+N CSQ GDWEFAC +Y+DMT KGV PDEMF+SA IDVAGHAG +DAAFEIIQ A
Sbjct: 660 VYTIAINSCSQIGDWEFACKVYDDMTRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQVA 719
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
+ +G GII YSSLMGACCNA++WQK L+LYED+K M +K TV+ MNAL+TALCD DQL
Sbjct: 720 KAKGAQLGIIPYSSLMGACCNAKNWQKGLELYEDIKSMKIKPTVATMNALITALCDGDQL 779
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
KA +L E+K G+RPNTITYSIL VASE+ DDLE GLMLLSQAKKD VAP L+M +CI
Sbjct: 780 PKALEVLSEMKAWGLRPNTITYSILSVASERKDDLEAGLMLLSQAKKDCVAPTLIMSKCI 839
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
I MCLR+F+ AC +G+ VLS GR Q++N+WTS AL +YR +AAG PT E +SQVLG
Sbjct: 840 ISMCLRKFENACTLGEAVLSFNSGRAQIENKWTSVALMVYRGTMAAGEKPTIELVSQVLG 899
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
CL++P D L++RLVENLGV+ S+ SN+CSLVDGFGEYDPRAFSLLEEAASLGIVP V
Sbjct: 900 CLQIPCDATLKNRLVENLGVTAVSSRYSNLCSLVDGFGEYDPRAFSLLEEAASLGIVPCV 959
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
S K+SPI +D + LQ+H AEVY LT+LKGLKHRLA GAKLPN++ILLP+EK Q+ T +GE
Sbjct: 960 SFKESPITMDAKQLQIHIAEVYFLTILKGLKHRLAAGAKLPNVTILLPVEKAQVITLEGE 1019
Query: 3039 KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLG 3218
KTIN+AGRIS+A+A+LLRRLGL Y GNES GKIR+NG+ +++W QPKLDSP P +
Sbjct: 1020 KTINVAGRISRAVASLLRRLGLPYQGNESYGKIRINGISLRRWLQPKLDSPFSGKPGEWS 1079
Query: 3219 LSQRRLGKGISFQQRDIRTGNLSL 3290
S RLGKGISFQQR+IRTG+ SL
Sbjct: 1080 TSLSRLGKGISFQQRNIRTGDFSL 1103
Score = 322 bits (826), Expect(2) = 0.0
Identities = 203/446 (45%), Positives = 261/446 (58%), Gaps = 11/446 (2%)
Frame = +2
Query: 464 EEEELVKEMKQINHGHESIVAEMQLVETSAARGANLATSTSELANVNMVASSVHDFLAM- 640
E + V++ + +H E +Q ET++ G++L E + N VA++V D + +
Sbjct: 151 ESQGSVEKASENSHEFEEKETHVQFQETASLHGSSLLIKAVESSGANFVAANVCDTVVVE 210
Query: 641 -GEXXXXXXXXXXXMQSES-DAPAYTLDRQTCQKRLEDGGQETGNDSKTQILLIEREQYS 814
E + SES A Q + E G+E S+ +E+ + +
Sbjct: 211 ESEVGDARVSPLPSVLSESGSALPLIFATQMTELTQEKSGEEIEFGSELSGS-VEKVKSN 269
Query: 815 ASFPEVDLQKGMDVPERSSNEVSKEDEQSCYNFIYRDNLRQDLYTFYEPLKANV---NNL 985
A VD NE ++ E S YN ++R+DLYTFY ++ V +NL
Sbjct: 270 AVLVPVD------------NESIEKAELSSYNGAISQSVREDLYTFYGANRSVVKSASNL 317
Query: 986 GA--LPSITSFQENGRPSPFKSFTADAAKVFVRSELLHHTESREGERDLAHYQGDSFNGR 1159
G S S ++ R S K T + + L + + AHY+G SF+
Sbjct: 318 GLKETSSHASLLKSKRFSSLKMNTGLETEDLSSQQPLQAADHVQKTMPPAHYEGGSFH-- 375
Query: 1160 KDMEKGKEVPANKETKTFHQ--HRPTDSFPSHN-LKRKQIHHLSHQFGAYNRLLKDGRLG 1330
K K +P +KE K Q H PS N + K H ++ AYNRLL++GRL
Sbjct: 376 ----KSKNLPGSKERKHPIQDSHSKLRQLPSPNGIPSKVKDHPPEEYNAYNRLLREGRLA 431
Query: 1331 DCIDLLEDMENKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVC 1510
+C+DLLEDME +GLLDMNKVYH FF+ C+SQKAVKEAFRF KL+QNPTLSTFNMLMSVC
Sbjct: 432 ECLDLLEDMERRGLLDMNKVYHVKFFKLCRSQKAVKEAFRFCKLVQNPTLSTFNMLMSVC 491
Query: 1511 ASSQDAEGAFQVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNN 1690
A+SQ++ GAF+VLQL + GLK DCKLYTTLISTCAKSGKVD MFEVFHEMVNAGVEPN
Sbjct: 492 ATSQNSAGAFEVLQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNV 551
Query: 1691 HTYGALIDGCAKAGQVAKAFGAYGIM 1768
HTYGALIDGCA+AGQVAKAFGAYGIM
Sbjct: 552 HTYGALIDGCARAGQVAKAFGAYGIM 577
Score = 89.0 bits (219), Expect = 2e-14
Identities = 61/260 (23%), Positives = 117/260 (45%), Gaps = 4/260 (1%)
Frame = +3
Query: 1794 AFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIA 1973
AF+VL A+ + D L+ CAK+G+VD EV+ + G+ Y
Sbjct: 500 AFEVL--QLAKAVGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGAL 557
Query: 1974 VNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEII--QAARKE 2147
++ C++ G A Y M SK V PD + +A I G +G +D AF+++ +
Sbjct: 558 IDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMTGEAQ 617
Query: 2148 GIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQLQKA 2327
I I +L+ AC NA +A ++Y V + N+K T + + + + + A
Sbjct: 618 PIDPDHITVGALIKACTNAGQVDRAQEVYNMVHKYNIKGTPEVYTIAINSCSQIGDWEFA 677
Query: 2328 TNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCIIGM 2507
+ ++ ++GV P+ + S L+ + ++ ++ AK G ++ ++G
Sbjct: 678 CKVYDDMTRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQVAKAKGAQLGIIPYSSLMGA 737
Query: 2508 C--LRRFQKACIVGDPVLSL 2561
C + +QK + + + S+
Sbjct: 738 CCNAKNWQKGLELYEDIKSM 757
>gb|EMJ00876.1| hypothetical protein PRUPE_ppa000631mg [Prunus persica]
Length = 1060
Score = 713 bits (1841), Expect(2) = 0.0
Identities = 352/504 (69%), Positives = 422/504 (83%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GAVDRAFDVL EM AE PI+PDH TVGAL+KACA AGQVDRAREVYKM+ +Y I+G+ E
Sbjct: 560 GAVDRAFDVLGEMMAETQPIEPDHTTVGALIKACANAGQVDRAREVYKMVHKYKIKGSSE 619
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIAVNCCSQTGDWEFAC++Y+DMT KGV PDEMF+SA IDVAGH G LDAAFEI+Q A
Sbjct: 620 VYTIAVNCCSQTGDWEFACNVYSDMTRKGVVPDEMFLSALIDVAGHVGKLDAAFEILQEA 679
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
R +GI G ++YSSLMGAC NA++W KAL+LYE +K ++ TVS +NAL+TALCD DQL
Sbjct: 680 RNQGIQVGTVSYSSLMGACSNAKNWHKALELYEYLKSTKIEKTVSTVNALITALCDGDQL 739
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
QKA +L E+K G+ PN+ITYSILLVASEK DDLE G MLLSQA+KDGVAPNLVMCRCI
Sbjct: 740 QKAMEVLSEMKGFGLHPNSITYSILLVASEKKDDLEAGHMLLSQAEKDGVAPNLVMCRCI 799
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
IGMCLRR +KAC +G+PVLS R Q+D++W S AL +YR+ I AG+ PT E +SQVLG
Sbjct: 800 IGMCLRRSEKACSLGEPVLS--RDRPQVDSKWASLALMVYRKTIVAGIMPTVEVISQVLG 857
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
CL+LP+D + ++RL+ENLGV+ S+ SN+CSL+DGFGEYDPRAFSLLEEAASLGIVP V
Sbjct: 858 CLQLPYDASFKNRLIENLGVTAETSRPSNLCSLIDGFGEYDPRAFSLLEEAASLGIVPCV 917
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
S K SP++VD R LQ+HTAEV++LTVLKGLKHRLA GAKLPN++ILLP+EKTQI +PKG
Sbjct: 918 SFKASPVVVDARKLQLHTAEVFILTVLKGLKHRLAAGAKLPNMTILLPVEKTQIMSPKG- 976
Query: 3039 KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLG 3218
KTINIAGR+ Q++AALLRRLG+ Y GNESRGKI+++G+ +K+W QPKL S P + G
Sbjct: 977 KTINIAGRVGQSVAALLRRLGIPYQGNESRGKIKISGLAMKRWLQPKLAS-FTGKPGEFG 1035
Query: 3219 LSQRRLGKGISFQQRDIRTGNLSL 3290
SQ +LGKGI+ QQR+IRTGNLSL
Sbjct: 1036 SSQLQLGKGITHQQRNIRTGNLSL 1059
Score = 302 bits (773), Expect(2) = 0.0
Identities = 175/350 (50%), Positives = 227/350 (64%), Gaps = 5/350 (1%)
Frame = +2
Query: 734 KRLEDGGQETGNDSKTQILLIEREQYSASFPEVDLQKGMDVPERSSNEVSKEDEQSCYNF 913
+R EDGG++ +D ++ L+ + + P V + V S+EV E + ++
Sbjct: 212 ERSEDGGRDPISDEFSK--LMSDSNFGVASPSVPVDDEESVEVGESDEVG---EATSFHV 266
Query: 914 IYRDNLRQDLYTFYEPLKANVNNLGALPSITSFQENGR-PSPF-KSFTADAAKVFVRSEL 1087
+ R+++R++L+ FYE K+ ++ +L NG+ PS F ++ T A + ++
Sbjct: 267 LNRESVREELHMFYESNKSETKSVASL--------NGKKPSSFLRNITVTGADLIPQASH 318
Query: 1088 LHHTESREGERDLAHYQGDSFNGRKDMEKGKEVPANKETKTFHQHRP--TDSFPS-HNLK 1258
H TES EG RKD+ KG ++KE + + FP H +
Sbjct: 319 -HTTESIEGHT----------RSRKDLGKGSGYSSDKEVRHLPKKNSGTMTQFPHPHGIH 367
Query: 1259 RKQIHHLSHQFGAYNRLLKDGRLGDCIDLLEDMENKGLLDMNKVYHAGFFRACKSQKAVK 1438
LS Q AY+RLLKDGRLGD + LLED+E +GLLDMNKVYHA FF CKSQKAV
Sbjct: 368 TNDRDLLSEQLSAYHRLLKDGRLGDSLKLLEDLERRGLLDMNKVYHARFFEICKSQKAVD 427
Query: 1439 EAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLKVDCKLYTTLISTCA 1618
+AFRF KLI NPTLST+NMLM+VCASSQD+E AF VL+LV++AG+K DCKLYTTLISTC
Sbjct: 428 KAFRFIKLIPNPTLSTYNMLMTVCASSQDSEEAFHVLRLVREAGMKPDCKLYTTLISTCG 487
Query: 1619 KSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGAYGIM 1768
KSGKV TMF+VFHEMVNAGVEPN HTYGALIDGC +AG+VAKAFGAYGIM
Sbjct: 488 KSGKVYTMFDVFHEMVNAGVEPNVHTYGALIDGCGRAGEVAKAFGAYGIM 537
Score = 74.3 bits (181), Expect = 4e-10
Identities = 56/280 (20%), Positives = 115/280 (41%), Gaps = 37/280 (13%)
Frame = +3
Query: 1782 AVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEV 1961
AVD+AF + + +P T LM CA + + A V +++ E G++ ++
Sbjct: 425 AVDKAFRFIKLIP------NPTLSTYNMLMTVCASSQDSEEAFHVLRLVREAGMKPDCKL 478
Query: 1962 YTIAVNCCSQTGDWEFACSIYNDMTSKG-------------------------------- 2045
YT ++ C ++G ++++M + G
Sbjct: 479 YTTLISTCGKSGKVYTMFDVFHEMVNAGVEPNVHTYGALIDGCGRAGEVAKAFGAYGIMR 538
Query: 2046 ---VSPDEMFISAWIDVAGHAGNLDAAFEII--QAARKEGIHAGIIAYSSLMGACCNARD 2210
V PD + +A I G +G +D AF+++ A + I +L+ AC NA
Sbjct: 539 SKKVKPDRVVFNALITACGQSGAVDRAFDVLGEMMAETQPIEPDHTTVGALIKACANAGQ 598
Query: 2211 WQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQLQKATNILFELKKQGVRPNTITYSI 2390
+A ++Y+ V + +K + + + + A N+ ++ ++GV P+ + S
Sbjct: 599 VDRAREVYKMVHKYKIKGSSEVYTIAVNCCSQTGDWEFACNVYSDMTRKGVVPDEMFLSA 658
Query: 2391 LLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCIIGMC 2510
L+ + + L+ +L +A+ G+ V ++G C
Sbjct: 659 LIDVAGHVGKLDAAFEILQEARNQGIQVGTVSYSSLMGAC 698
>ref|XP_002534048.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223525928|gb|EEF28334.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1129
Score = 709 bits (1829), Expect(2) = 0.0
Identities = 350/504 (69%), Positives = 416/504 (82%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GAVDRAFDVLAEM AE HPIDPDH+TVGALMKACAKAGQVDRA+EVY M+ +Y I+GTPE
Sbjct: 625 GAVDRAFDVLAEMGAETHPIDPDHITVGALMKACAKAGQVDRAKEVYNMLHKYNIKGTPE 684
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIAVN CSQTGDWEFA S+Y+DMT KGV+PDEMF+SA +DVAGHAG +D AFE +Q A
Sbjct: 685 VYTIAVNFCSQTGDWEFARSVYDDMTRKGVAPDEMFLSALVDVAGHAGLVDIAFETLQEA 744
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
R +G GI+ YSSLMGAC NA++WQKAL+LYED+K + +K TVS MNAL+TALCD DQL
Sbjct: 745 RTQGTQLGIVPYSSLMGACSNAKNWQKALELYEDIKAIKLKPTVSTMNALMTALCDGDQL 804
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
QKA L E+K G+ PN +TYSILLVASE+ DDL+ G MLLSQAK+D + P +M +CI
Sbjct: 805 QKALETLSEMKSFGLCPNIVTYSILLVASERKDDLDAGDMLLSQAKEDCITPTFLMYKCI 864
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
IGMCLRR++KAC +G+ +LS GR Q+ N+WTS AL +YRE IAAG PT E +SQVLG
Sbjct: 865 IGMCLRRYKKACSLGESILSFDSGRPQIKNEWTSRALTVYRETIAAGEKPTMEVVSQVLG 924
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
CL+LP D +L+ RLVENLGV+ +PSK SN+C+LVDGFGEYDPRAFSLLEEAASLG VP
Sbjct: 925 CLQLPCDASLKGRLVENLGVTADPSKFSNLCALVDGFGEYDPRAFSLLEEAASLGTVPCA 984
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
S K+SPI++D + LQ H AEVYLLT+LKGLKHRLA GAKLPN++ILLP E TQI+T KGE
Sbjct: 985 SFKESPIVMDAKLLQSHIAEVYLLTILKGLKHRLAAGAKLPNITILLPTEMTQIKTLKGE 1044
Query: 3039 KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLG 3218
KTIN+AGRISQ +A+LLRRLGL Y GNES GKIR+NG+ +++W QPKL SP P +L
Sbjct: 1045 KTINLAGRISQDVASLLRRLGLPYQGNESYGKIRINGISLRRWLQPKLASPFSGKPEELS 1104
Query: 3219 LSQRRLGKGISFQQRDIRTGNLSL 3290
S R+GKGI+ QQR+IRTGNLSL
Sbjct: 1105 FSLSRIGKGITHQQRNIRTGNLSL 1128
Score = 299 bits (766), Expect(2) = 0.0
Identities = 176/361 (48%), Positives = 226/361 (62%), Gaps = 11/361 (3%)
Frame = +2
Query: 719 RQTCQKRLEDGGQETGNDSKTQILLIEREQYSASFPEVDLQKGMDVPERSSNEVSKEDEQ 898
R+ + +E ET DS+ LL E+ +AS ++E+ K+D
Sbjct: 257 RELSELTIERSRDETEVDSELTQLLEEKSNDTAS-------------STMNDEIGKKDGI 303
Query: 899 SCYNFIYRDNLRQDLYTFYEPLKA---NVNNLGALPSITSFQENGRPSPFKSFTADAAKV 1069
S Y I + + R+DLY FYE ++ + +NL L +++S + S + V
Sbjct: 304 SSYYDITKKSAREDLYKFYEESQSTEKSPSNLNGLDTVSSHAAPLIGNNISSLKVNG--V 361
Query: 1070 FVRSELL-----HHTESREGERDLAHYQGDSFNGRKDMEKGKEVPANKETKTFHQHRPTD 1234
+ELL E+ E + LA Y+ + + + + P KE Q T+
Sbjct: 362 GKEAELLSPQSPQFAETVERKVHLARYERGASRKNEHIGGRRGFPREKEKGHVIQDEHTN 421
Query: 1235 --SFPSHN-LKRKQIHHLSHQFGAYNRLLKDGRLGDCIDLLEDMENKGLLDMNKVYHAGF 1405
FP N + H + Q YNRLL+DGRL +C+DLLEDME +GLLDM+K+YHA F
Sbjct: 422 LPEFPYPNGVHSTNKDHKAEQVHGYNRLLRDGRLAECVDLLEDMERRGLLDMSKIYHAKF 481
Query: 1406 FRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLKVDC 1585
F+ CK QKAVKEAFRF KL+ NP+LSTFNMLMSVC+SSQD++GAF+VL+L Q AGLK DC
Sbjct: 482 FKICKIQKAVKEAFRFCKLVPNPSLSTFNMLMSVCSSSQDSDGAFEVLRLAQGAGLKADC 541
Query: 1586 KLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGAYGI 1765
KLYTTLISTCAKSGKVD MFEVFHEMVNAGVEPN HTYG+LIDGCAKAGQ+AKAFGAYGI
Sbjct: 542 KLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGSLIDGCAKAGQMAKAFGAYGI 601
Query: 1766 M 1768
+
Sbjct: 602 L 602
Score = 89.0 bits (219), Expect = 2e-14
Identities = 76/326 (23%), Positives = 140/326 (42%), Gaps = 14/326 (4%)
Frame = +3
Query: 1788 DRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYT 1967
D AF+VL A+ + D L+ CAK+G+VD EV+ + G+ Y
Sbjct: 523 DGAFEVLR--LAQGAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYG 580
Query: 1968 IAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEII--QAAR 2141
++ C++ G A Y + SK V PD + +A I G +G +D AF+++ A
Sbjct: 581 SLIDGCAKAGQMAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAE 640
Query: 2142 KEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQLQ 2321
I I +LM AC A +A ++Y + + N+K T + + +
Sbjct: 641 THPIDPDHITVGALMKACAKAGQVDRAKEVYNMLHKYNIKGTPEVYTIAVNFCSQTGDWE 700
Query: 2322 KATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCII 2501
A ++ ++ ++GV P+ + S L+ + +++ L +A+ G +V ++
Sbjct: 701 FARSVYDDMTRKGVAPDEMFLSALVDVAGHAGLVDIAFETLQEARTQGTQLGIVPYSSLM 760
Query: 2502 GMC--LRRFQKACIVGDPV--LSLTPGRLQLDNQWTSF--------ALRIYREAIAAGLA 2645
G C + +QKA + + + + L P ++ T+ AL E + GL
Sbjct: 761 GACSNAKNWQKALELYEDIKAIKLKPTVSTMNALMTALCDGDQLQKALETLSEMKSFGLC 820
Query: 2646 PTAEELSQVLGCLKLPHDVNLRDRLV 2723
P S +L + D++ D L+
Sbjct: 821 PNIVTYSILLVASERKDDLDAGDMLL 846
Score = 59.7 bits (143), Expect = 1e-05
Identities = 47/218 (21%), Positives = 86/218 (39%), Gaps = 2/218 (0%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
G + D+L +M +D + K C V A K++ +
Sbjct: 453 GRLAECVDLLEDMERR-GLLDMSKIYHAKFFKICKIQKAVKEAFRFCKLVPNPSL----S 507
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
+ + ++ CS + D + A + G+ D + I +G +DA FE+
Sbjct: 508 TFNMLMSVCSSSQDSDGAFEVLRLAQGAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEM 567
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
G+ + Y SL+ C A KA Y ++ N+K + NAL+TA +
Sbjct: 568 VNAGVEPNVHTYGSLIDGCAKAGQMAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAV 627
Query: 2319 QKATNILFEL--KKQGVRPNTITYSILLVASEKMDDLE 2426
+A ++L E+ + + P+ IT L+ A K ++
Sbjct: 628 DRAFDVLAEMGAETHPIDPDHITVGALMKACAKAGQVD 665
>ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like isoform X1 [Citrus sinensis]
Length = 1072
Score = 712 bits (1837), Expect(2) = 0.0
Identities = 349/504 (69%), Positives = 422/504 (83%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GAVDRAFDVLAEM AEVHP+DPDH+T+GALMKACA AGQVDRAREVYKMI +Y I+GTPE
Sbjct: 570 GAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPE 629
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIA+NCCSQTGDWEFACS+Y+DMT KGV PDE+F+SA ID AGHAG ++AAFEI+Q A
Sbjct: 630 VYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEA 689
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
+ +GI GII+YSSLMGAC NA++WQKAL+LYE +K + +K TVS MNAL+TALCD D+L
Sbjct: 690 KNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDRL 749
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
K +L ++K G+ PNTITYSILLVA E+ DD+EVGLMLLSQAK+DGV PNLVM +CI
Sbjct: 750 PKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCI 809
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
IGMC RR++KA + + VLS GR Q++N+WTS L +YREAI AG PT E +S+VLG
Sbjct: 810 IGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLVLMVYREAIVAGTIPTVEVVSKVLG 869
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
CL+LP++ ++R+RLVENLGVS + K SN+CSL+DGFGEYDPRAFSLLEEAAS GIVP V
Sbjct: 870 CLQLPYNADIRERLVENLGVSADALKRSNLCSLIDGFGEYDPRAFSLLEEAASFGIVPCV 929
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
S K+SP++VD R L++HTA+VYLLT+LKGL+HRLA GAKLPN++ILLP+EKTQI + GE
Sbjct: 930 SFKESPVVVDARKLEIHTAKVYLLTILKGLRHRLAAGAKLPNVNILLPVEKTQIMSVGGE 989
Query: 3039 KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLG 3218
KTI+IA R +QAIAALLRRLGL Y GN S GKIR+NG+ +K+WFQPKL SP P +
Sbjct: 990 KTIDIAERTTQAIAALLRRLGLPYQGNGSYGKIRINGLALKRWFQPKLASPFSGKPGE-- 1047
Query: 3219 LSQRRLGKGISFQQRDIRTGNLSL 3290
LS +LGK I+ QQR+IRTGNLSL
Sbjct: 1048 LSSLQLGKFITHQQRNIRTGNLSL 1071
Score = 293 bits (749), Expect(2) = 0.0
Identities = 161/270 (59%), Positives = 185/270 (68%), Gaps = 3/270 (1%)
Frame = +2
Query: 968 ANVNNLGALPSITSFQENGRPSPFKSFTADAAKVFVRSELLHHTESREGERDLAHYQGDS 1147
AN+ + A+ S S S K T E L E EG+ LA ++
Sbjct: 278 ANLEFVKAISSHASPLNGYSLSSLKRDTEPKGPELSLQEALQTAEHVEGKIRLACHREGP 337
Query: 1148 FNGRKDMEKGKEVPANKETKTFHQHRPTD--SFPSHNLKRKQI-HHLSHQFGAYNRLLKD 1318
+ K + + P N E Q + FP N K H +S Q +YNRL++
Sbjct: 338 SHKIKARRRIRNFPRNNERINLMQDVGKNMLQFPYPNGKHANYAHDVSEQLHSYNRLIRQ 397
Query: 1319 GRLGDCIDLLEDMENKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNML 1498
GR+ DCIDLLEDME KGLLDM+KVYHA FF CKSQKA+KEAFRF KL+ NPTLSTFNML
Sbjct: 398 GRISDCIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNML 457
Query: 1499 MSVCASSQDAEGAFQVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGV 1678
MSVCASS+D+EGAFQVL+LVQ+AGLK DCKLYTTLI+TCAKSGKVD MFEVFHEMVNAG+
Sbjct: 458 MSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGI 517
Query: 1679 EPNNHTYGALIDGCAKAGQVAKAFGAYGIM 1768
EPN HTYGALIDGCAKAGQVAKAFGAYGIM
Sbjct: 518 EPNVHTYGALIDGCAKAGQVAKAFGAYGIM 547
Score = 84.3 bits (207), Expect = 4e-13
Identities = 56/270 (20%), Positives = 116/270 (42%), Gaps = 39/270 (14%)
Frame = +3
Query: 1839 DPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFACS 2018
+P T LM CA + + A +V +++ E G++ ++YT + C+++G +
Sbjct: 448 NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFE 507
Query: 2019 IYNDMTS-----------------------------------KGVSPDEMFISAWIDVAG 2093
++++M + K V PD + +A I G
Sbjct: 508 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 567
Query: 2094 HAGNLDAAFEIIQAARKE--GIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLT 2267
+G +D AF+++ E + I +LM AC NA +A ++Y+ + + N+K T
Sbjct: 568 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 627
Query: 2268 VSMMNALLTALCDVDQLQKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLS 2447
+ + + A ++ ++ K+GV P+ + S L+ + +E +L
Sbjct: 628 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 687
Query: 2448 QAKKDGVAPNLVMCRCIIGMC--LRRFQKA 2531
+AK G++ ++ ++G C + +QKA
Sbjct: 688 EAKNQGISVGIISYSSLMGACSNAKNWQKA 717
>ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like isoform X3 [Citrus sinensis]
Length = 713
Score = 712 bits (1837), Expect(2) = 0.0
Identities = 349/504 (69%), Positives = 422/504 (83%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GAVDRAFDVLAEM AEVHP+DPDH+T+GALMKACA AGQVDRAREVYKMI +Y I+GTPE
Sbjct: 211 GAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPE 270
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIA+NCCSQTGDWEFACS+Y+DMT KGV PDE+F+SA ID AGHAG ++AAFEI+Q A
Sbjct: 271 VYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEA 330
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
+ +GI GII+YSSLMGAC NA++WQKAL+LYE +K + +K TVS MNAL+TALCD D+L
Sbjct: 331 KNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDRL 390
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
K +L ++K G+ PNTITYSILLVA E+ DD+EVGLMLLSQAK+DGV PNLVM +CI
Sbjct: 391 PKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCI 450
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
IGMC RR++KA + + VLS GR Q++N+WTS L +YREAI AG PT E +S+VLG
Sbjct: 451 IGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLVLMVYREAIVAGTIPTVEVVSKVLG 510
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
CL+LP++ ++R+RLVENLGVS + K SN+CSL+DGFGEYDPRAFSLLEEAAS GIVP V
Sbjct: 511 CLQLPYNADIRERLVENLGVSADALKRSNLCSLIDGFGEYDPRAFSLLEEAASFGIVPCV 570
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
S K+SP++VD R L++HTA+VYLLT+LKGL+HRLA GAKLPN++ILLP+EKTQI + GE
Sbjct: 571 SFKESPVVVDARKLEIHTAKVYLLTILKGLRHRLAAGAKLPNVNILLPVEKTQIMSVGGE 630
Query: 3039 KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLG 3218
KTI+IA R +QAIAALLRRLGL Y GN S GKIR+NG+ +K+WFQPKL SP P +
Sbjct: 631 KTIDIAERTTQAIAALLRRLGLPYQGNGSYGKIRINGLALKRWFQPKLASPFSGKPGE-- 688
Query: 3219 LSQRRLGKGISFQQRDIRTGNLSL 3290
LS +LGK I+ QQR+IRTGNLSL
Sbjct: 689 LSSLQLGKFITHQQRNIRTGNLSL 712
Score = 288 bits (736), Expect(2) = 0.0
Identities = 141/178 (79%), Positives = 155/178 (87%), Gaps = 1/178 (0%)
Frame = +2
Query: 1238 FPSHNLKRKQI-HHLSHQFGAYNRLLKDGRLGDCIDLLEDMENKGLLDMNKVYHAGFFRA 1414
FP N K H +S Q +YNRL++ GR+ DCIDLLEDME KGLLDM+KVYHA FF
Sbjct: 11 FPYPNGKHANYAHDVSEQLHSYNRLIRQGRISDCIDLLEDMERKGLLDMDKVYHARFFNV 70
Query: 1415 CKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLKVDCKLY 1594
CKSQKA+KEAFRF KL+ NPTLSTFNMLMSVCASS+D+EGAFQVL+LVQ+AGLK DCKLY
Sbjct: 71 CKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLY 130
Query: 1595 TTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGAYGIM 1768
TTLI+TCAKSGKVD MFEVFHEMVNAG+EPN HTYGALIDGCAKAGQVAKAFGAYGIM
Sbjct: 131 TTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIM 188
Score = 84.3 bits (207), Expect = 4e-13
Identities = 56/270 (20%), Positives = 116/270 (42%), Gaps = 39/270 (14%)
Frame = +3
Query: 1839 DPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFACS 2018
+P T LM CA + + A +V +++ E G++ ++YT + C+++G +
Sbjct: 89 NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFE 148
Query: 2019 IYNDMTS-----------------------------------KGVSPDEMFISAWIDVAG 2093
++++M + K V PD + +A I G
Sbjct: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
Query: 2094 HAGNLDAAFEIIQAARKE--GIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLT 2267
+G +D AF+++ E + I +LM AC NA +A ++Y+ + + N+K T
Sbjct: 209 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
Query: 2268 VSMMNALLTALCDVDQLQKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLS 2447
+ + + A ++ ++ K+GV P+ + S L+ + +E +L
Sbjct: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
Query: 2448 QAKKDGVAPNLVMCRCIIGMC--LRRFQKA 2531
+AK G++ ++ ++G C + +QKA
Sbjct: 329 EAKNQGISVGIISYSSLMGACSNAKNWQKA 358
>gb|EXB36850.1| hypothetical protein L484_003235 [Morus notabilis]
Length = 1125
Score = 699 bits (1805), Expect(2) = 0.0
Identities = 344/504 (68%), Positives = 416/504 (82%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GAVDRAFDVLAEM AE IDPDH+TVGALMKACA +GQVDRAREVYKM+ +Y ++GTPE
Sbjct: 621 GAVDRAFDVLAEMTAEPELIDPDHITVGALMKACANSGQVDRAREVYKMVHQYNLKGTPE 680
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIAVN S GDWEFA ++Y+DMT KGV PDEMF+SA ID AGHAG LDAAFEI+ A
Sbjct: 681 VYTIAVNTSSHMGDWEFARNVYDDMTRKGVLPDEMFLSALIDAAGHAGKLDAAFEILSEA 740
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
+ G+ G ++YSSLMGAC NA++WQKAL+LYED+K + TVS +NAL+TALCD DQL
Sbjct: 741 KNRGVKFGTVSYSSLMGACSNAKNWQKALELYEDLKSTKSEQTVSTVNALITALCDGDQL 800
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
QKA +L E+K G+ PN+ITYSILLVASEK DDLEVGL+L SQAKKDG++PNL+M RCI
Sbjct: 801 QKAMEVLSEMKALGLSPNSITYSILLVASEKKDDLEVGLVLFSQAKKDGISPNLLMSRCI 860
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
+G CLRR++ A +G+PVLS PGR Q+ N+WTS AL +YR+ IAAG+ PT + LSQVLG
Sbjct: 861 LGTCLRRYENASTLGEPVLSFDPGRPQVVNKWTSSALMVYRDTIAAGVTPTIDVLSQVLG 920
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
CL+LPHD +L++RL+ENL VS + S+ SN+ SL+DGFGEYDPRAFSLLEEAAS GI+ V
Sbjct: 921 CLQLPHDPSLKNRLIENLAVSVDTSRPSNLSSLIDGFGEYDPRAFSLLEEAASFGIISCV 980
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
S KQSP+IVD R LQ+HTAEVYLLTVLKGLK+RLA GAKLP ++ILLP+EK Q+ +PK E
Sbjct: 981 SFKQSPVIVDTRELQIHTAEVYLLTVLKGLKNRLAAGAKLPTITILLPVEKAQLTSPKEE 1040
Query: 3039 KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLG 3218
KTIN+AGRI +A+AALLRRLGL Y G+ES GKIR+ G+ +K+WF+PKL SP P ++
Sbjct: 1041 KTINLAGRIGRAVAALLRRLGLPYQGHESHGKIRIYGLTLKRWFKPKLASPFSGRPEEIN 1100
Query: 3219 LSQRRLGKGISFQQRDIRTGNLSL 3290
LSQ RLGK I+ QQR+IRTGNLSL
Sbjct: 1101 LSQFRLGKEIAHQQRNIRTGNLSL 1124
Score = 296 bits (758), Expect(2) = 0.0
Identities = 159/312 (50%), Positives = 205/312 (65%), Gaps = 9/312 (2%)
Frame = +2
Query: 860 ERSSNEVSKEDEQSCYNFIYRDNLRQDLYTFYEPLKANVNNLGALPSITSFQENGRPSPF 1039
E + +E E + YNF+ +++R++L+ FY+ K++ +G + S N
Sbjct: 287 ETDKRRLGEEGEMTSYNFLLGESVRKELHMFYDENKSDEKGIGKINGHNSLSPNASAPNS 346
Query: 1040 KSFTADAAKVFVR----SELLHHTESREGERDL---AHYQGDSFNGRKDME-KGKEVPAN 1195
K+ +A V+ + L ++ E + +H +G +G+ + +G
Sbjct: 347 KTVSASLRDTIVKGGEATALFPPLKADNHESKIPFSSHKEGTLRSGKNSGQGRGYSRDLI 406
Query: 1196 KETKTFHQHR-PTDSFPSHNLKRKQIHHLSHQFGAYNRLLKDGRLGDCIDLLEDMENKGL 1372
K + H+ P + L +Q HH S Q YNRL+KDGRL D ++LLEDME +GL
Sbjct: 407 KGNLAQNNHKAPAKLTRLNGLDVEQKHHPSEQISTYNRLVKDGRLSDAVELLEDMERRGL 466
Query: 1373 LDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQ 1552
LDMNKVYHA FF+ CK QKAV EAFR+ LI PTLST+NMLMSVC SSQD EGAF+V+Q
Sbjct: 467 LDMNKVYHAKFFKICKFQKAVNEAFRYVNLIPYPTLSTYNMLMSVCTSSQDPEGAFKVMQ 526
Query: 1553 LVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAG 1732
LVQ+AGLK DCKLYTTLISTCAKSGKVD+MFEVFH+MVN GVEPN HTYG+LIDGCA+AG
Sbjct: 527 LVQEAGLKADCKLYTTLISTCAKSGKVDSMFEVFHKMVNDGVEPNVHTYGSLIDGCARAG 586
Query: 1733 QVAKAFGAYGIM 1768
QVAKAFGAYGIM
Sbjct: 587 QVAKAFGAYGIM 598
Score = 59.7 bits (143), Expect = 1e-05
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Frame = +3
Query: 54 KFAMEASLSPITSCAAVSSF--LYPRCCCVRSLRKEFLGNGHNLRPPG-LRSRRKCKNIG 224
+F+ + + + SC +SS P +RS+R+EFLG GHNLRPPG LRSR + +
Sbjct: 4 RFSAKPQILTLISCTPLSSSSSASPSRSSLRSIRREFLGCGHNLRPPGSLRSRGRQRK-- 61
Query: 225 FQFQVYPSKRFVLRASLDSQSIXXXXXXXXXXXFTVFYLNYSKRKTNSEE 374
+ S RF+ RASL S + +V Y N+ K K N+ E
Sbjct: 62 -PWSHSRSSRFLFRASLGSHPVLVVVAVVTVSAASVVYWNFFKSKKNARE 110
>ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citrus clementina]
gi|557525497|gb|ESR36803.1| hypothetical protein
CICLE_v10027915mg [Citrus clementina]
Length = 713
Score = 709 bits (1831), Expect(2) = 0.0
Identities = 349/504 (69%), Positives = 422/504 (83%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GAVDRAFDVLAEM AEVHP+DPDH+T+GALMKACA AGQVDRAREVYKMI +Y I+GTPE
Sbjct: 211 GAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPE 270
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIA+NCCSQTGDWEFACS+Y+DMT KGV PDE+F+SA ID AGHAG ++AAFEI+Q A
Sbjct: 271 VYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEA 330
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
+ +GI GII+YSSLMGAC NA++WQKAL+LYE +K + +K TVS MNAL+TALCD DQL
Sbjct: 331 KNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQL 390
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
K +L ++K G+ PNTITYSILLVA E+ DD+EVGLMLLSQAK+DGV PNLVM +CI
Sbjct: 391 PKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCI 450
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
IGMC RR++KA + + VLS GR Q++N+WTS AL +YREAI AG PT E +S+VLG
Sbjct: 451 IGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLALMVYREAIVAGTIPTVEVVSKVLG 510
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
CL+LP++ ++R+RLVENLGVS + K SN+CSL+DGFGEYDPRAFSLLEEAAS GIVP V
Sbjct: 511 CLQLPYNADIRERLVENLGVSADALKRSNLCSLIDGFGEYDPRAFSLLEEAASFGIVPCV 570
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
S K+ P++VD R L++HTA+VYLLT+LKGL+HRLA GAKLPN++ILLP+EKTQI++ GE
Sbjct: 571 SFKEIPVVVDARKLEIHTAKVYLLTILKGLRHRLAAGAKLPNVNILLPVEKTQIKSVGGE 630
Query: 3039 KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLG 3218
KTI+IA R +QAIAALLRRLGL GN S GKIR+NG+ +K+WFQPKL SP P +
Sbjct: 631 KTIDIAERTTQAIAALLRRLGLPNQGNGSYGKIRINGLALKRWFQPKLASPFSGKPGE-- 688
Query: 3219 LSQRRLGKGISFQQRDIRTGNLSL 3290
LS +LGK I+ QQR+IRTGNLSL
Sbjct: 689 LSSLQLGKFITHQQRNIRTGNLSL 712
Score = 283 bits (724), Expect(2) = 0.0
Identities = 139/178 (78%), Positives = 154/178 (86%), Gaps = 1/178 (0%)
Frame = +2
Query: 1238 FPSHNLKRKQI-HHLSHQFGAYNRLLKDGRLGDCIDLLEDMENKGLLDMNKVYHAGFFRA 1414
FP N K H +S Q +YNRL++ GR+ +CIDLLEDME KGLLDM+KVYHA FF
Sbjct: 11 FPYPNGKHANYAHDVSEQLHSYNRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNV 70
Query: 1415 CKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLKVDCKLY 1594
CKSQKA+KEAF F KL+ NPTLSTFNMLMSVCASS+D+EGAFQVL+LVQ+AGLK DCKLY
Sbjct: 71 CKSQKAIKEAFCFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLY 130
Query: 1595 TTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGAYGIM 1768
TTLI+TCAKSGKVD MFEVFHEMVNAG+EPN HTYGALIDGCAKAGQVAKAFGAYGIM
Sbjct: 131 TTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIM 188
Score = 84.3 bits (207), Expect = 4e-13
Identities = 56/270 (20%), Positives = 116/270 (42%), Gaps = 39/270 (14%)
Frame = +3
Query: 1839 DPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFACS 2018
+P T LM CA + + A +V +++ E G++ ++YT + C+++G +
Sbjct: 89 NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFE 148
Query: 2019 IYNDMTS-----------------------------------KGVSPDEMFISAWIDVAG 2093
++++M + K V PD + +A I G
Sbjct: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
Query: 2094 HAGNLDAAFEIIQAARKE--GIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLT 2267
+G +D AF+++ E + I +LM AC NA +A ++Y+ + + N+K T
Sbjct: 209 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
Query: 2268 VSMMNALLTALCDVDQLQKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLS 2447
+ + + A ++ ++ K+GV P+ + S L+ + +E +L
Sbjct: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
Query: 2448 QAKKDGVAPNLVMCRCIIGMC--LRRFQKA 2531
+AK G++ ++ ++G C + +QKA
Sbjct: 329 EAKNQGISVGIISYSSLMGACSNAKNWQKA 358
>ref|XP_004292148.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1028
Score = 714 bits (1843), Expect(2) = 0.0
Identities = 349/505 (69%), Positives = 423/505 (83%), Gaps = 1/505 (0%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GAVDRAFDVL EM+AE PI+PDH T+GAL+KACA AGQV+RAREVYKMI +Y I+GT E
Sbjct: 523 GAVDRAFDVLEEMKAETQPIEPDHTTIGALIKACANAGQVERAREVYKMIHKYKIKGTSE 582
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIAVNCCSQT DWEFAC++Y+ M GV+PDE+F+SA IDVAGHAG LDAAFEIIQ A
Sbjct: 583 VYTIAVNCCSQTADWEFACTVYDYMKKNGVTPDEVFLSALIDVAGHAGKLDAAFEIIQDA 642
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
GI G ++YSSLMGAC NA++WQKAL+LYED+K ++ TVS +NAL+TALCD DQL
Sbjct: 643 SNRGIQVGTVSYSSLMGACSNAKNWQKALELYEDLKSAKIEQTVSTINALITALCDGDQL 702
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
QKA +L E+K G+RPN+ITYSIL+VASEK DDLE GLMLLSQA+ D V PNLVMCRCI
Sbjct: 703 QKAMEVLSEMKSIGLRPNSITYSILVVASEKKDDLEAGLMLLSQAEMDKVVPNLVMCRCI 762
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
IGMCLRR +KAC +G+PVL L GR Q+D++W+S AL +YR+ I AG PT E +SQVLG
Sbjct: 763 IGMCLRRSEKACTLGEPVLPLDSGRPQVDSKWSSVALMVYRKTIVAGTTPTIEIISQVLG 822
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
CL+LP+D ++R++ENLGV+ + S+ S +CSL+DGFGEYDPRAFSLLEEAASLGIVP V
Sbjct: 823 CLQLPYDAASKNRVIENLGVTADMSRASKLCSLIDGFGEYDPRAFSLLEEAASLGIVPCV 882
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
S K SPI+VD + LQ+HTAEVY+LTVL+GLKHRLA GAKLPN++ILLP+EKTQI +PKG+
Sbjct: 883 SFKASPIVVDAKKLQLHTAEVYILTVLRGLKHRLAAGAKLPNMTILLPVEKTQILSPKGK 942
Query: 3039 -KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADL 3215
KTIN++GR+ Q++A+LLRRLG+ Y GNESRGKIR++G+ +K+WFQPKL SP A+L
Sbjct: 943 LKTINLSGRVGQSVASLLRRLGIDYQGNESRGKIRISGLTLKRWFQPKLASPFTGKLAEL 1002
Query: 3216 GLSQRRLGKGISFQQRDIRTGNLSL 3290
G SQ RLGKGI QQR+IRTGNLSL
Sbjct: 1003 GSSQLRLGKGIMHQQRNIRTGNLSL 1027
Score = 278 bits (711), Expect(2) = 0.0
Identities = 153/307 (49%), Positives = 197/307 (64%), Gaps = 7/307 (2%)
Frame = +2
Query: 869 SNEVSKEDEQSC-------YNFIYRDNLRQDLYTFYEPLKANVNNLGALPSITSFQENGR 1027
S VS DE+S + F+ +++R++++ FYE K N L +SF N
Sbjct: 206 SPSVSGNDEESVEVGEANGFRFLNGESVREEIHMFYEAEK-NEMKLDE-KKFSSFLRNNT 263
Query: 1028 PSPFKSFTADAAKVFVRSELLHHTESREGERDLAHYQGDSFNGRKDMEKGKEVPANKETK 1207
+ SF ++ H + + + +++ R D+ G A+ E +
Sbjct: 264 LTRSDSF----------GQVSHQITTENVKGKMPNHKEGHVRSRGDLGNGNGYVADTELR 313
Query: 1208 TFHQHRPTDSFPSHNLKRKQIHHLSHQFGAYNRLLKDGRLGDCIDLLEDMENKGLLDMNK 1387
+ + ++ H++S Q AY+RLLKDGRL D + LLED+E K LLDMNK
Sbjct: 314 HLAKKNSKTVPQPNGIQTSDTHYISEQLSAYHRLLKDGRLSDSLRLLEDLEKKDLLDMNK 373
Query: 1388 VYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQLVQDA 1567
VYH FF CK +KAV +AFRF KLI NPT+ST+NMLMSVCASSQD+EGAF VL LV++A
Sbjct: 374 VYHGRFFETCKKKKAVDQAFRFIKLIPNPTMSTYNMLMSVCASSQDSEGAFNVLGLVREA 433
Query: 1568 GLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAGQVAKA 1747
GL+VDCKLYTTLISTCAKSGKV TMF+VFHEMV+AGVEPN HTYGALIDGC +AG+VAKA
Sbjct: 434 GLRVDCKLYTTLISTCAKSGKVYTMFDVFHEMVSAGVEPNVHTYGALIDGCGRAGEVAKA 493
Query: 1748 FGAYGIM 1768
FGAYGIM
Sbjct: 494 FGAYGIM 500
Score = 84.0 bits (206), Expect = 5e-13
Identities = 78/361 (21%), Positives = 149/361 (41%), Gaps = 4/361 (1%)
Frame = +3
Query: 1782 AVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEV 1961
AVD+AF + + +P T LM CA + + A V ++ E G+R ++
Sbjct: 388 AVDQAFRFIKLIP------NPTMSTYNMLMSVCASSQDSEGAFNVLGLVREAGLRVDCKL 441
Query: 1962 YTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAAR 2141
YT ++ C+++G ++++M S GV P+ A ID G AG + AF R
Sbjct: 442 YTTLISTCAKSGKVYTMFDVFHEMVSAGVEPNVHTYGALIDGCGRAGEVAKAFGAYGIMR 501
Query: 2142 KEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTV--SMMNALLTALCDVDQ 2315
+ + + +++L+ AC + +A + E++K + + + AL+ A + Q
Sbjct: 502 SKKVKPDRVVFNALITACGQSGAVDRAFDVLEEMKAETQPIEPDHTTIGALIKACANAGQ 561
Query: 2316 LQKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRC 2495
+++A + + K ++ + Y+I + + D E + KK+GV P+ V
Sbjct: 562 VERAREVYKMIHKYKIKGTSEVYTIAVNCCSQTADWEFACTVYDYMKKNGVTPDEVFLSA 621
Query: 2496 IIGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVL 2675
+I + G+L A I ++A G+ S ++
Sbjct: 622 LIDVAGH----------------AGKLDA-------AFEIIQDASNRGIQVGTVSYSSLM 658
Query: 2676 GCLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGF--GEYDPRAFSLLEEAASLGIV 2849
G + L E+L + S I +L+ G+ +A +L E S+G+
Sbjct: 659 GACSNAKNWQKALELYEDLKSAKIEQTVSTINALITALCDGDQLQKAMEVLSEMKSIGLR 718
Query: 2850 P 2852
P
Sbjct: 719 P 719
>ref|XP_004147063.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Cucumis sativus]
Length = 1108
Score = 677 bits (1746), Expect(2) = 0.0
Identities = 331/504 (65%), Positives = 407/504 (80%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GAVDRAFDVLAEM AE+HPI+PDH+T+GALMKACA AGQVDRAREVYKMI +Y I+GTPE
Sbjct: 604 GAVDRAFDVLAEMGAELHPIEPDHITIGALMKACANAGQVDRAREVYKMIHDYKIKGTPE 663
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIAVNCCSQ+ DW+FA +IY DMT KGV PDE+F+SA IDVAGHAG LDAAFE++ A
Sbjct: 664 VYTIAVNCCSQSCDWDFASNIYQDMTRKGVQPDEIFLSALIDVAGHAGKLDAAFEVLGEA 723
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
+ GI GI++YSSLMGAC NA++WQKAL LYED+K M ++LTVS +NAL+TAL D +QL
Sbjct: 724 KTLGIRVGIVSYSSLMGACSNAKNWQKALALYEDLKSMKLRLTVSTVNALITALSDGEQL 783
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
Q A +IL E+K+ G+ PN ITYSIL AS++ +DLE+ LMLLSQAK+DG+ P L M RCI
Sbjct: 784 QMAMDILTEMKELGLSPNNITYSILTAASDRNNDLEIALMLLSQAKEDGIVPTLTMYRCI 843
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
IGMCLRR + P++SL Q+D++WT+ AL++YRE I AG+ P+ + LSQVLG
Sbjct: 844 IGMCLRRIADPSSLDRPLMSLDSTLPQVDSKWTAQALKVYREIIEAGIVPSIDVLSQVLG 903
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
CL++PHD L+ RL+EN+GVS + S+ S++CSL+DGFGEYDPRAFSL EEAASLG+ P V
Sbjct: 904 CLQIPHDPALKSRLIENIGVSADSSRSSSLCSLIDGFGEYDPRAFSLFEEAASLGVAPFV 963
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
SLK +PI+VD + LQ+HTAEVYLLTVLKGLKHRLA G++LPN+ ILL E T+I KGE
Sbjct: 964 SLKGNPIVVDAKELQIHTAEVYLLTVLKGLKHRLAAGSRLPNIMILLSNETTEILFSKGE 1023
Query: 3039 KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLG 3218
+TIN++GR+ QA+AALLRRLGL Y GNES GKIR+NG+ +++W QPKL L P + G
Sbjct: 1024 RTINLSGRVGQAVAALLRRLGLPYQGNESSGKIRINGLALRRWLQPKLSDSLSGKPGEFG 1083
Query: 3219 LSQRRLGKGISFQQRDIRTGNLSL 3290
Q RL KGIS QQRDIR GNLSL
Sbjct: 1084 TFQSRLRKGISHQQRDIRIGNLSL 1107
Score = 283 bits (725), Expect(2) = 0.0
Identities = 154/304 (50%), Positives = 200/304 (65%), Gaps = 2/304 (0%)
Frame = +2
Query: 863 RSSNEVSKEDEQSCYNFIYRDNLRQDLYTFYEPLKANVNNLGALPSITSFQENGRPSPFK 1042
+ E+ KE++ + NF + R+D+Y FYE K++ N S TS N + S
Sbjct: 280 KEDGELLKEEKFNSSNFQIEEPAREDIYMFYEDTKSS--NQTETSSRTSHLYNQKFSSLM 337
Query: 1043 -SFTADAAKVFVRSELLHHTESREGERDLAHYQGDSFNGRKDMEKGKEVPANKETKTFHQ 1219
+ + A++ + L + D+ + +G S N +K ++ + H+
Sbjct: 338 VNGVSRVAELVLEDSLPVAGYVQREVPDVRYKEGSSGNRKKSGGNNISRHGERKEPSLHK 397
Query: 1220 HRPTDSFPSHNLKRKQIHHLS-HQFGAYNRLLKDGRLGDCIDLLEDMENKGLLDMNKVYH 1396
+ + P N K +L Q+ +YN+ LK GRL DCI +L+DME +G+LDMNK+YH
Sbjct: 398 GKVVNGLPHPNGKHVHYKNLDVDQYKSYNQCLKGGRLHDCIRILQDMEKEGILDMNKIYH 457
Query: 1397 AGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLK 1576
FF CKS+KAV+EAF++T LIQNPTLSTFNMLMSVCASSQD+E AFQV++LVQ+AG+K
Sbjct: 458 GKFFNICKSKKAVQEAFQYTALIQNPTLSTFNMLMSVCASSQDSERAFQVVRLVQEAGMK 517
Query: 1577 VDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGA 1756
DCKLYTTLISTC KSGKVD MFEVFH MVNAGVEPN HTYGALIDGCA+A QVAKAFG
Sbjct: 518 ADCKLYTTLISTCGKSGKVDAMFEVFHRMVNAGVEPNVHTYGALIDGCARAAQVAKAFGV 577
Query: 1757 YGIM 1768
YGIM
Sbjct: 578 YGIM 581
Score = 90.1 bits (222), Expect = 7e-15
Identities = 93/412 (22%), Positives = 173/412 (41%), Gaps = 39/412 (9%)
Frame = +3
Query: 1782 AVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEV 1961
AV AF A ++ +P T LM CA + +RA +V +++ E G++ ++
Sbjct: 469 AVQEAFQYTALIQ------NPTLSTFNMLMSVCASSQDSERAFQVVRLVQEAGMKADCKL 522
Query: 1962 YTIAVNCCSQTGDWEF-----------------------------------ACSIYNDMT 2036
YT ++ C ++G + A +Y M
Sbjct: 523 YTTLISTCGKSGKVDAMFEVFHRMVNAGVEPNVHTYGALIDGCARAAQVAKAFGVYGIMR 582
Query: 2037 SKGVSPDEMFISAWIDVAGHAGNLDAAFEII--QAARKEGIHAGIIAYSSLMGACCNARD 2210
SK V PD + +A I G +G +D AF+++ A I I +LM AC NA
Sbjct: 583 SKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALMKACANAGQ 642
Query: 2211 WQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQLQKATNILFELKKQGVRPNTITYSI 2390
+A ++Y+ + + +K T + + A+NI ++ ++GV+P+ I S
Sbjct: 643 VDRAREVYKMIHDYKIKGTPEVYTIAVNCCSQSCDWDFASNIYQDMTRKGVQPDEIFLSA 702
Query: 2391 LLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCIIGMC--LRRFQKACIVGDPVLSLT 2564
L+ + L+ +L +AK G+ +V ++G C + +QKA + + + S+
Sbjct: 703 LIDVAGHAGKLDAAFEVLGEAKTLGIRVGIVSYSSLMGACSNAKNWQKALALYEDLKSM- 761
Query: 2565 PGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLGCLKLPHDVNLRDRLVENLGVST 2744
+L+L T + A++ G E+L + L ++ LG+S
Sbjct: 762 --KLRL----TVSTVNALITALSDG-----EQLQMAMDIL----------TEMKELGLSP 800
Query: 2745 NPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAVSLKQSPIIVDVRNL 2900
N S + + D + + A LL +A GIVP +++ + I + +R +
Sbjct: 801 NNITYSILTAASDRNNDLE-IALMLLSQAKEDGIVPTLTMYRCIIGMCLRRI 851
Score = 61.6 bits (148), Expect = 3e-06
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Frame = +3
Query: 72 SLSPITSCAAVSSFLYPRCCCVRSLRKEFLGNGHNLRPP-GLRSRRKCKNIGFQFQVYPS 248
+ +P + SSF Y R +R +R++FLG+ HNLRPP LRSRR+C+N+G Q S
Sbjct: 13 TFNPCLPLNSPSSFSYSR---LRFVRRQFLGSSHNLRPPDALRSRRRCRNLGLFVQ---S 66
Query: 249 KRFVLRASLDSQSIXXXXXXXXXXXFTVF------YLNYSKRKTNSEEK 377
R +LRA+ S + F Y+N ++RK N+ E+
Sbjct: 67 PRCILRATFSSNPVLIVVAVVTFSAVVTFSAVSFIYMNLNRRKKNAVER 115
>ref|XP_006587670.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like [Glycine max]
Length = 1150
Score = 695 bits (1793), Expect(2) = 0.0
Identities = 339/513 (66%), Positives = 415/513 (80%), Gaps = 9/513 (1%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GA+DRAFDVLAEM AE PIDPDHVT+GAL+KAC KAGQV+RA+EVYKM+ +Y I+G PE
Sbjct: 637 GALDRAFDVLAEMTAETQPIDPDHVTIGALLKACTKAGQVERAKEVYKMVQKYNIKGCPE 696
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIA+N CSQTGDWEFA ++YNDMT KG+ PDE+F+SA IDVAGHA LDAAF+++Q A
Sbjct: 697 VYTIAINSCSQTGDWEFAHTVYNDMTQKGILPDEIFLSALIDVAGHAKKLDAAFDVLQEA 756
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
RK GI GI++YSSLMGAC NAR+WQKAL+LYE +K + + +TVS +NALLTALCD DQ
Sbjct: 757 RKGGILIGIMSYSSLMGACSNARNWQKALELYEYLKSLKLTITVSTVNALLTALCDGDQF 816
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
QKA +LFE+K G+RPN+IT+SIL+VASEK DD+E MLLS AKKDGV PNL+MCRCI
Sbjct: 817 QKALEVLFEMKGLGLRPNSITFSILIVASEKKDDMEAAQMLLSLAKKDGVVPNLIMCRCI 876
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
IGMC RRF+KAC VG+PVLS GR Q+DN+WTS AL +YRE I AG PT+E LSQ+LG
Sbjct: 877 IGMCQRRFEKACFVGEPVLSFDSGRPQVDNKWTSLALMVYRETIEAGEKPTSEILSQILG 936
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
CL+LP+D ++++RLVENLGVS S+ SN+CSL+DGFGEYDPRAFS+LEE+AS G+VP+V
Sbjct: 937 CLQLPYDTSVKNRLVENLGVSMETSRSSNLCSLMDGFGEYDPRAFSILEESASHGVVPSV 996
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
SLK SP+++D + L TAEVYL+TVLKGLKHRLA GA+LPN+ ILLP+EKT++ +PK +
Sbjct: 997 SLKVSPVVIDAKELNASTAEVYLITVLKGLKHRLAAGARLPNIIILLPVEKTEVVSPKWK 1056
Query: 3039 KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRN----- 3203
K IN+ GR QA+ ALLRRL + + G+ES GK+R+ G+ +KKWFQPKL P N
Sbjct: 1057 KNINLGGRAGQAVGALLRRLQIPHQGSESNGKLRIGGLALKKWFQPKLAYPFSVNMGSPT 1116
Query: 3204 ----PADLGLSQRRLGKGISFQQRDIRTGNLSL 3290
P D S RLGK IS QQR+IRTGNLSL
Sbjct: 1117 FSGKPGDWNSSLSRLGKSISNQQRNIRTGNLSL 1149
Score = 263 bits (671), Expect(2) = 0.0
Identities = 164/376 (43%), Positives = 215/376 (57%), Gaps = 32/376 (8%)
Frame = +2
Query: 737 RLEDGGQETGNDSKTQILLIEREQYSASFPEVDLQKGMDVPERSSNEVSKEDEQSCYNFI 916
++E+ + +D + + ++E E ++S + +D + E+ D + +
Sbjct: 252 QVEESQDKVDSDDELPLNMVESEHTASSVSVNNALTTVDEHTKEKIELGAIDN----DIL 307
Query: 917 YRDNLRQDLYTFYEPLKANVNNLGALPSITSFQENGRPSPFKSFT--ADAAKVFVRSEL- 1087
+ +++R+ LY FYE K ++ L S+ S SP SF A V L
Sbjct: 308 FGESVREGLYMFYEVNKPATRSMTPLSSLKSL------SPRASFMNKKGLASVMGNGALK 361
Query: 1088 ---------LHHTESREGERDLAHYQGDSF-------NGRK------DMEKGKE------ 1183
L E +G ++ + + + N RK +ME+
Sbjct: 362 GSGLSTDIPLQSAEHVKGAVKISSHNKEGYPPQHVSKNLRKGGISLREMERNSMDHNSKI 421
Query: 1184 -VPANKETKTFHQHRPTDSFPSHNLKRKQIHHLSHQFGAYNRLLKDGRLGDCIDLLEDME 1360
+P N + H + F H+ + L YN LLK RL +C++LL+DME
Sbjct: 422 FLPLNAHSINVHVDQTNGQFRVHDGPKMDPSEL---LSKYNNLLKVERLHECVELLKDME 478
Query: 1361 NKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAF 1540
KGLLDM KVYHA FF CK +KAVKEAF F +LI NP LSTFNMLMSVCASSQD+EGAF
Sbjct: 479 TKGLLDMTKVYHAKFFNICKKRKAVKEAFDFIRLIPNPMLSTFNMLMSVCASSQDSEGAF 538
Query: 1541 QVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGC 1720
QVLQL++DA L+ DCKLYTTLI TCAKSGKVD MFEVFH+MVN+GVEPN HTYGALIDGC
Sbjct: 539 QVLQLLKDARLEPDCKLYTTLILTCAKSGKVDLMFEVFHKMVNSGVEPNVHTYGALIDGC 598
Query: 1721 AKAGQVAKAFGAYGIM 1768
A+AGQVAKAFGAYGIM
Sbjct: 599 ARAGQVAKAFGAYGIM 614
Score = 93.2 bits (230), Expect = 8e-16
Identities = 58/236 (24%), Positives = 111/236 (47%), Gaps = 4/236 (1%)
Frame = +3
Query: 1836 IDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFAC 2015
++PD L+ CAK+G+VD EV+ + G+ Y ++ C++ G A
Sbjct: 549 LEPDCKLYTTLILTCAKSGKVDLMFEVFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAF 608
Query: 2016 SIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEII--QAARKEGIHAGIIAYSSLMG 2189
Y M SK V PD + +A I +G LD AF+++ A + I + +L+
Sbjct: 609 GAYGIMRSKNVKPDRVVFNALIAACAQSGALDRAFDVLAEMTAETQPIDPDHVTIGALLK 668
Query: 2190 ACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQLQKATNILFELKKQGVRP 2369
AC A ++A ++Y+ V++ N+K + + + + A + ++ ++G+ P
Sbjct: 669 ACTKAGQVERAKEVYKMVQKYNIKGCPEVYTIAINSCSQTGDWEFAHTVYNDMTQKGILP 728
Query: 2370 NTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCIIGMC--LRRFQKA 2531
+ I S L+ + L+ +L +A+K G+ ++ ++G C R +QKA
Sbjct: 729 DEIFLSALIDVAGHAKKLDAAFDVLQEARKGGILIGIMSYSSLMGACSNARNWQKA 784
>ref|XP_004505826.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Cicer arietinum]
Length = 1113
Score = 689 bits (1779), Expect(2) = 0.0
Identities = 337/504 (66%), Positives = 407/504 (80%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GA+ RAFDV+AEM AE+ PI+PDHVT G LMKACAKAGQV+RAREVYKMI +Y I+G+ E
Sbjct: 609 GAMARAFDVVAEMEAEIQPIEPDHVTFGTLMKACAKAGQVERAREVYKMIQQYNIKGSSE 668
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIA+N CSQTGDWEFA S+Y+DMT KGV PDEMF+SA IDVAGHA NL+AAF+I+Q A
Sbjct: 669 VYTIAINSCSQTGDWEFARSVYDDMTQKGVLPDEMFLSALIDVAGHAQNLEAAFDILQQA 728
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
RK GI G++ YSSLMGAC AR+WQKAL+LYE +K + + TVS +NALLTALCD DQ
Sbjct: 729 RKGGIQIGMMTYSSLMGACSKARNWQKALELYEHLKSLKLVQTVSTVNALLTALCDGDQF 788
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
QKA +L E+K G+RPN+IT+SIL+VASEK DD+E ML SQAKKDG P L+MCRCI
Sbjct: 789 QKALEVLSEMKGLGLRPNSITFSILIVASEKKDDMEAAQMLFSQAKKDGAPPTLIMCRCI 848
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
IGMCLRRF+KAC+VG+PVLS GR Q++N+WTS AL +YRE I AG PT+E LSQ+LG
Sbjct: 849 IGMCLRRFEKACLVGEPVLSFDSGRPQVNNEWTSLALTVYRETIGAGEKPTSELLSQILG 908
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
C+K P+D L++RLVENLGVS+ S+ SN+CSL+DGFGEYDPR FS+LEEAAS G+VP+V
Sbjct: 909 CMKFPYDTYLKNRLVENLGVSSETSRNSNLCSLIDGFGEYDPRVFSILEEAASYGVVPSV 968
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
S K +PI++D + L TAEVYLLTVLKGLKHRLA GA+LPNL ILLP+E+T++ +P GE
Sbjct: 969 SFKVNPIVIDAKELHAFTAEVYLLTVLKGLKHRLAAGARLPNLIILLPVEETKVSSPNGE 1028
Query: 3039 KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLG 3218
K I +A R QA+AAL RRL + Y GNES GK+R+N + + KWFQPKL SP P D
Sbjct: 1029 KIIILAERAGQAVAALFRRLHIPYQGNESNGKLRINSLGLIKWFQPKLASPFSGLPGDWS 1088
Query: 3219 LSQRRLGKGISFQQRDIRTGNLSL 3290
S+ RLGK IS QQR+IRTGNLSL
Sbjct: 1089 SSESRLGKNISHQQRNIRTGNLSL 1112
Score = 265 bits (678), Expect(2) = 0.0
Identities = 180/450 (40%), Positives = 241/450 (53%), Gaps = 27/450 (6%)
Frame = +2
Query: 500 NHGHESIVAEMQLVETSAARGANLATSTSELANVNMVASSVHDFLAMGEXXXXXXXXXXX 679
NH E +Q +++S + L T T + ++ +++ SSV+D
Sbjct: 152 NHVFEDQEVHLQFLQSSMVQETALKTQTIDSSS-SVLDSSVND---NSSEVLEEPFLSVT 207
Query: 680 MQSESDAPAYTLDRQTCQKRLEDGGQETGNDSKTQILLIEREQYSASFPEVDLQKGMD-V 856
QS S P + T Q + + +D + + +++ E ++S VD+ + +
Sbjct: 208 FQSGSLEPIAFAEEMTLQ--VVENQDVVDSDLELPLSMVKPEHDASS---VDVDNALSTI 262
Query: 857 PERSSNEVSKEDEQSCYNFIYRDNLRQDLYTFYE----------PLKAN---------VN 979
E + ++ +S ++ +++R+ LY FYE PL +N N
Sbjct: 263 NEHTKEKIELRAIKS--GVLFGESVREGLYMFYEDKNSASGSMKPLSSNESLSTGASFAN 320
Query: 980 NLGALPSITSFQENG-RPSPFKS-----FTADAAKVFVRSELLHHTESREGERDLAHYQG 1141
+ G +I + NG R S S F A K+ E + R Y
Sbjct: 321 SKGFPSAIGNTSVNGLRLSTDISQRNAEFVEGAVKISSHREGFPRQHVSKNLRKAGRYLR 380
Query: 1142 DSFNGRKDMEKGKEVPANKETKTFHQHRPTDSFPSHN-LKRKQIHHLSHQFGAYNRLLKD 1318
D D K +P + + H + D H+ K HLS Y+ LLK
Sbjct: 381 DRERNYMDHNSNKVLPQSSHSVRVHVDQKKDKIRVHDGQKIDPSKHLSK----YSYLLKA 436
Query: 1319 GRLGDCIDLLEDMENKGLLDMNKVYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNML 1498
GRL +C++LL+DME KGLLDM K YHA FF CK QKAVKEAF + +LI NPTLSTFNML
Sbjct: 437 GRLRECVELLKDMEMKGLLDMTKAYHAKFFNICKKQKAVKEAFDYIRLIPNPTLSTFNML 496
Query: 1499 MSVCASSQDAEGAFQVLQLVQDAGLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGV 1678
MSVC SSQD+EGAFQV+QL++DA DCKLYTTLISTCAK+GKVD MFEVFH MVN+GV
Sbjct: 497 MSVCTSSQDSEGAFQVMQLLKDAQQDPDCKLYTTLISTCAKTGKVDLMFEVFHTMVNSGV 556
Query: 1679 EPNNHTYGALIDGCAKAGQVAKAFGAYGIM 1768
EPN HTYGALIDGCA+AGQVAKAFG YGIM
Sbjct: 557 EPNVHTYGALIDGCARAGQVAKAFGVYGIM 586
Score = 99.8 bits (247), Expect = 9e-18
Identities = 61/245 (24%), Positives = 118/245 (48%), Gaps = 4/245 (1%)
Frame = +3
Query: 1839 DPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFACS 2018
DPD L+ CAK G+VD EV+ + G+ Y ++ C++ G A
Sbjct: 522 DPDCKLYTTLISTCAKTGKVDLMFEVFHTMVNSGVEPNVHTYGALIDGCARAGQVAKAFG 581
Query: 2019 IYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEII--QAARKEGIHAGIIAYSSLMGA 2192
+Y M SK V PD + +A I +G + AF+++ A + I + + +LM A
Sbjct: 582 VYGIMRSKNVKPDRVVFNALIAACAQSGAMARAFDVVAEMEAEIQPIEPDHVTFGTLMKA 641
Query: 2193 CCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQLQKATNILFELKKQGVRPN 2372
C A ++A ++Y+ +++ N+K + + + + + A ++ ++ ++GV P+
Sbjct: 642 CAKAGQVERAREVYKMIQQYNIKGSSEVYTIAINSCSQTGDWEFARSVYDDMTQKGVLPD 701
Query: 2373 TITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCIIGMC--LRRFQKACIVGD 2546
+ S L+ + +LE +L QA+K G+ ++ ++G C R +QKA + +
Sbjct: 702 EMFLSALIDVAGHAQNLEAAFDILQQARKGGIQIGMMTYSSLMGACSKARNWQKALELYE 761
Query: 2547 PVLSL 2561
+ SL
Sbjct: 762 HLKSL 766
>ref|XP_006592076.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like [Glycine max]
Length = 1127
Score = 681 bits (1758), Expect(2) = 0.0
Identities = 331/513 (64%), Positives = 411/513 (80%), Gaps = 9/513 (1%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GAVDRAFDVLAEM AE PIDPDHVT+GAL+KAC KAGQV+RA+EVYKM+ +Y I+G PE
Sbjct: 614 GAVDRAFDVLAEMAAETQPIDPDHVTIGALLKACTKAGQVERAQEVYKMVQKYNIKGCPE 673
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIA+N CSQTGDWE+A ++YNDMT KG+ PDE+F+SA IDVAGHA LDAAF+++Q A
Sbjct: 674 VYTIAINSCSQTGDWEYARTVYNDMTQKGILPDEIFLSALIDVAGHAKKLDAAFDVLQEA 733
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
K GI GI++YSSLMGAC NAR+WQKAL+LYE +K + + +TVS +NALLTALCD DQ
Sbjct: 734 HKGGIQIGIMSYSSLMGACSNARNWQKALELYEYLKSLKLTITVSTVNALLTALCDGDQF 793
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
QKA +LFE+K G+ PN+IT+SIL+VASEK DD+E M+LS AKKDGVAPNL+MCRCI
Sbjct: 794 QKALEVLFEMKGLGLSPNSITFSILIVASEKKDDMEAAQMILSLAKKDGVAPNLIMCRCI 853
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
IGMC RR++KAC VG+PVLS GR +DN+WTS AL +YRE I AG PT+E L Q+LG
Sbjct: 854 IGMCQRRYEKACFVGEPVLSFDSGRPLVDNKWTSLALMVYRETIEAGGKPTSEILPQILG 913
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
CL+LP+D ++++RLVENLGV S+ SN+CSL+DGFGEYDPRAFS+LEE+AS G+VP+V
Sbjct: 914 CLQLPYDTSVKNRLVENLGVRAETSRSSNLCSLMDGFGEYDPRAFSILEESASHGVVPSV 973
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
S K SPI++D + L TAEVY++TVLKGLK+RLA GA+LPN+ ILLP+E+T++ +PKG+
Sbjct: 974 SFKVSPIVIDAKELHASTAEVYIITVLKGLKYRLAAGARLPNIIILLPVEETEVVSPKGK 1033
Query: 3039 KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRN----- 3203
K IN+ GR QA+ ALLRRL + + G+ES GK+R+ G+ +KKWFQPKL SP N
Sbjct: 1034 KIINLGGRAGQAVGALLRRLQIPHQGSESNGKLRIGGLALKKWFQPKLASPFSVNMGSPT 1093
Query: 3204 ----PADLGLSQRRLGKGISFQQRDIRTGNLSL 3290
P D S RLGK IS QQR+IR GNLSL
Sbjct: 1094 FSGKPGDWNSSLSRLGKNISNQQRNIRIGNLSL 1126
Score = 261 bits (668), Expect(2) = 0.0
Identities = 160/368 (43%), Positives = 212/368 (57%), Gaps = 24/368 (6%)
Frame = +2
Query: 737 RLEDGGQETGNDSKTQILLIEREQYSASFPEVDLQKGMDVPERSSNEVSKEDEQSCYNFI 916
++E+ + +D + + ++E E ++S + +D + E+ ++ + +
Sbjct: 232 QVEESQDKVDSDDELPLNMVEPEHSASSVSVNNALTTVDGHTKEKIELGAVND----DVL 287
Query: 917 YRDNLRQDLYTFYEPLKANVNNLGALPSITSFQ-------ENGRPSPFKSFTADAAKVFV 1075
+ + +R+ LY FYE K ++ L S+ S + G PS + + +
Sbjct: 288 FGEPVREGLYMFYEVNKPATGSMTPLSSLKSLSPRASFRNKKGLPSVMGNGALKGSGLST 347
Query: 1076 RSELLHHTESREGERDLAHYQGD------SFNGRK-----------DMEKGKEVPANKET 1204
L E +G ++ ++G S N RK D K P N
Sbjct: 348 DIPL-QSAEHVKGAVKISSHKGGYPPQHVSKNLRKGVISLRERESMDHNGNKVFPLNAHA 406
Query: 1205 KTFHQHRPTDSFPSHNLKRKQIHHLSHQFGAYNRLLKDGRLGDCIDLLEDMENKGLLDMN 1384
H + F H+ + L YN LLK RL +C++LL+DME KGLLDM+
Sbjct: 407 TKVHVDQTNGQFRVHDGHKMDSSEL---LSKYNNLLKVERLHECVELLKDMETKGLLDMS 463
Query: 1385 KVYHAGFFRACKSQKAVKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQLVQD 1564
KVYHA FF CK +KAVKEAF F +LI NP LSTFNMLMSVCASSQD+EGAFQVLQL++D
Sbjct: 464 KVYHAKFFNICKKRKAVKEAFDFIRLIPNPMLSTFNMLMSVCASSQDSEGAFQVLQLLKD 523
Query: 1565 AGLKVDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAGQVAK 1744
A L+ DCKLYTTLI TCAKSGKVD MFEVFH+MVN+GVEPN HTYGALI GCA+AGQVAK
Sbjct: 524 ARLEPDCKLYTTLILTCAKSGKVDLMFEVFHKMVNSGVEPNVHTYGALIGGCARAGQVAK 583
Query: 1745 AFGAYGIM 1768
AFGAYGIM
Sbjct: 584 AFGAYGIM 591
Score = 92.8 bits (229), Expect = 1e-15
Identities = 58/236 (24%), Positives = 110/236 (46%), Gaps = 4/236 (1%)
Frame = +3
Query: 1836 IDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFAC 2015
++PD L+ CAK+G+VD EV+ + G+ Y + C++ G A
Sbjct: 526 LEPDCKLYTTLILTCAKSGKVDLMFEVFHKMVNSGVEPNVHTYGALIGGCARAGQVAKAF 585
Query: 2016 SIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEII--QAARKEGIHAGIIAYSSLMG 2189
Y M SK V PD + +A I +G +D AF+++ AA + I + +L+
Sbjct: 586 GAYGIMRSKNVKPDRVVFNALIAACAQSGAVDRAFDVLAEMAAETQPIDPDHVTIGALLK 645
Query: 2190 ACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQLQKATNILFELKKQGVRP 2369
AC A ++A ++Y+ V++ N+K + + + + A + ++ ++G+ P
Sbjct: 646 ACTKAGQVERAQEVYKMVQKYNIKGCPEVYTIAINSCSQTGDWEYARTVYNDMTQKGILP 705
Query: 2370 NTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCIIGMC--LRRFQKA 2531
+ I S L+ + L+ +L +A K G+ ++ ++G C R +QKA
Sbjct: 706 DEIFLSALIDVAGHAKKLDAAFDVLQEAHKGGIQIGIMSYSSLMGACSNARNWQKA 761
Score = 61.2 bits (147), Expect = 3e-06
Identities = 44/199 (22%), Positives = 81/199 (40%), Gaps = 2/199 (1%)
Frame = +3
Query: 1836 IDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFAC 2015
+D V C K V A + ++I + + + ++ C+ + D E A
Sbjct: 460 LDMSKVYHAKFFNICKKRKAVKEAFDFIRLIPNPML----STFNMLMSVCASSQDSEGAF 515
Query: 2016 SIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAARKEGIHAGIIAYSSLMGAC 2195
+ + + PD + I +G +D FE+ G+ + Y +L+G C
Sbjct: 516 QVLQLLKDARLEPDCKLYTTLILTCAKSGKVDLMFEVFHKMVNSGVEPNVHTYGALIGGC 575
Query: 2196 CNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQLQKATNILFEL--KKQGVRP 2369
A KA Y ++ N+K + NAL+ A + +A ++L E+ + Q + P
Sbjct: 576 ARAGQVAKAFGAYGIMRSKNVKPDRVVFNALIAACAQSGAVDRAFDVLAEMAAETQPIDP 635
Query: 2370 NTITYSILLVASEKMDDLE 2426
+ +T LL A K +E
Sbjct: 636 DHVTIGALLKACTKAGQVE 654
>ref|XP_003607170.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508225|gb|AES89367.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1173
Score = 678 bits (1749), Expect(2) = 0.0
Identities = 335/504 (66%), Positives = 408/504 (80%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GA+ RAFDV+AEM AE+ PI PDHVT G LMKACAKAGQV+RAREVYKMI +Y I+G+ E
Sbjct: 669 GAMARAFDVIAEMEAEIQPIVPDHVTFGTLMKACAKAGQVERAREVYKMIQQYNIKGSSE 728
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIA+N CSQTGDWEFA S+Y+DMT KGV PDEMF+SA IDVAGHA L+AAF+I+Q A
Sbjct: 729 VYTIAINSCSQTGDWEFARSVYDDMTQKGVLPDEMFMSALIDVAGHAKKLEAAFDILQQA 788
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
RKEG+ GI+ YSSLMGAC A++WQ+AL+LYE +K + + TVS +NALLTALCD DQ
Sbjct: 789 RKEGVQIGIMTYSSLMGACSKAKNWQRALELYEYLKSLKLVQTVSTVNALLTALCDGDQF 848
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
QKA +L E+K G+ PN+IT+SIL+VASEK DD+E MLLSQAKKDG AP L+MCRCI
Sbjct: 849 QKALEVLSEMKGLGLCPNSITFSILIVASEKKDDMEAAQMLLSQAKKDGAAPTLIMCRCI 908
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
IGMCLRRF+KAC+VG+ VLS GR Q++N+WTS AL +YRE I AG PT++ LSQVLG
Sbjct: 909 IGMCLRRFEKACLVGETVLSFDSGRPQVNNEWTSLALMVYRETIGAGEKPTSQILSQVLG 968
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
CLK P+D +R+RLVENLGV+ SK SN+CSL+DGFGEYDPRAFS+LEEAAS G+VP+V
Sbjct: 969 CLKFPYDTYVRNRLVENLGVTAESSKTSNLCSLIDGFGEYDPRAFSILEEAASYGVVPSV 1028
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
SLK +PI++D + L TAEVYLLT+LKGLKHRLA GAKLPN+ ILLP+E+T++ +P+GE
Sbjct: 1029 SLKMNPIVIDAKELDAFTAEVYLLTILKGLKHRLAAGAKLPNIIILLPVEETKLLSPEGE 1088
Query: 3039 KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLIRNPADLG 3218
KTI +A R QA+AAL RRL + Y G+ES GK+R+N + + KW+QPKL SP D
Sbjct: 1089 KTIILAERGGQAVAALFRRLHIPYQGSESNGKLRINSLGLIKWYQPKLASPFGGFQGDWS 1148
Query: 3219 LSQRRLGKGISFQQRDIRTGNLSL 3290
+Q RLGK IS QQR+IRTGNLSL
Sbjct: 1149 STQLRLGKNISNQQRNIRTGNLSL 1172
Score = 244 bits (623), Expect(2) = 0.0
Identities = 156/352 (44%), Positives = 190/352 (53%), Gaps = 65/352 (18%)
Frame = +2
Query: 908 NFIYRDNLRQDLYTFYEPLKANVNNLGALPSI------TSFQENGR-PSPFKSFTAD--- 1057
N I+ +++R+ LY FY+ ++ L SI TSF + S ++ + D
Sbjct: 300 NVIFGESVREGLYMFYDDNNLASESMTPLSSIKSLSPSTSFVNSTELSSAIRNISLDGLG 359
Query: 1058 ---------------AAKVFVRSELLHHTESREGERDLAHYQGDSFNGRKDMEKGKEVPA 1192
AAK+ E + + R + Y D D +P
Sbjct: 360 LSADISLQNAEYVEGAAKISSPKEGYPPQHTSKKLRKSSRYVRDMERNYMDHNNNNVLPQ 419
Query: 1193 NKETKTFHQHRPTDSFPSHN-LKRKQIHHLSHQFGAYNRLLKDGR--------------- 1324
+ + H + D H+ LK HLS YN LLK GR
Sbjct: 420 SSHVRV-HVDQRNDQIRVHDGLKVDPSKHLSK----YNNLLKAGRYPNEPNLLRMKQCCQ 474
Query: 1325 ------------------------LGDCIDLLEDMENKGLLDMNKVYHAGFFRACKSQKA 1432
L +C++LL+DME KGLLDM KVYHA FF CK QKA
Sbjct: 475 TPPFISYTNLKLEKLILKYIDFVRLCECVELLKDMEMKGLLDMTKVYHAKFFNICKKQKA 534
Query: 1433 VKEAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLKVDCKLYTTLIST 1612
V EAF + +LI NPTLSTFNMLMSVCASSQD+EGAFQV+QL++DA L DCKLYTTLIST
Sbjct: 535 VNEAFDYVRLIPNPTLSTFNMLMSVCASSQDSEGAFQVIQLLKDARLDPDCKLYTTLIST 594
Query: 1613 CAKSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGAYGIM 1768
C K GKVD MFEVFH+MVN+GVEPN HTYGALIDGCA+AGQVAKAFGAYGIM
Sbjct: 595 CGKCGKVDLMFEVFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIM 646
Score = 72.8 bits (177), Expect = 1e-09
Identities = 57/280 (20%), Positives = 117/280 (41%), Gaps = 37/280 (13%)
Frame = +3
Query: 1782 AVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEV 1961
AV+ AFD + + +P T LM CA + + A +V +++ + + ++
Sbjct: 534 AVNEAFDYVRLIP------NPTLSTFNMLMSVCASSQDSEGAFQVIQLLKDARLDPDCKL 587
Query: 1962 YTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAF------- 2120
YT ++ C + G + +++ M + GV P+ A ID AG + AF
Sbjct: 588 YTTLISTCGKCGKVDLMFEVFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMR 647
Query: 2121 ------------EIIQAARKEGIHAGI------------------IAYSSLMGACCNARD 2210
+I A + G A + + +LM AC A
Sbjct: 648 SKNVKADRVVFNALIAACAQSGAMARAFDVIAEMEAEIQPIVPDHVTFGTLMKACAKAGQ 707
Query: 2211 WQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQLQKATNILFELKKQGVRPNTITYSI 2390
++A ++Y+ +++ N+K + + + + + A ++ ++ ++GV P+ + S
Sbjct: 708 VERAREVYKMIQQYNIKGSSEVYTIAINSCSQTGDWEFARSVYDDMTQKGVLPDEMFMSA 767
Query: 2391 LLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCIIGMC 2510
L+ + LE +L QA+K+GV ++ ++G C
Sbjct: 768 LIDVAGHAKKLEAAFDILQQARKEGVQIGIMTYSSLMGAC 807
>ref|NP_195209.2| pentatricopeptide repeat protein MRL1 [Arabidopsis thaliana]
gi|223635623|sp|Q0WLC6.2|PP349_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein MRL1,
chloroplastic; AltName: Full=Protein MATURATION OF RBCL
1; Short=AtMRL1; Flags: Precursor
gi|332661026|gb|AEE86426.1| pentatricopeptide repeat
protein MRL1 [Arabidopsis thaliana]
Length = 1089
Score = 644 bits (1662), Expect(2) = 0.0
Identities = 314/505 (62%), Positives = 394/505 (78%), Gaps = 1/505 (0%)
Frame = +3
Query: 1779 GAVDRAFDVLAEMRAEVHPIDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPE 1958
GAVDRAFDVLAEM+AE HPIDPDH+++GALMKAC AGQV+RA+EVY+MI +YGIRGTPE
Sbjct: 586 GAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPE 645
Query: 1959 VYTIAVNCCSQTGDWEFACSIYNDMTSKGVSPDEMFISAWIDVAGHAGNLDAAFEIIQAA 2138
VYTIAVN CS++GDW+FACSIY DM K V+PDE+F SA IDVAGHA LD AF I+Q A
Sbjct: 646 VYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDA 705
Query: 2139 RKEGIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKLTVSMMNALLTALCDVDQL 2318
+ +GI G I+YSSLMGACCNA+DW+KAL+LYE +K + ++ T+S MNAL+TALC+ +QL
Sbjct: 706 KSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQL 765
Query: 2319 QKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLLSQAKKDGVAPNLVMCRCI 2498
KA L E+K G++PNTITYS+L++ASE+ DD EV LLSQAK DGV+PNL+MCRCI
Sbjct: 766 PKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCI 825
Query: 2499 IGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYREAIAAGLAPTAEELSQVLG 2678
+C RRF+KAC G+PV+S GR Q++N+WTS AL +YRE I+ G PT E +SQVLG
Sbjct: 826 TSLCKRRFEKACAGGEPVVSFKSGRPQIENKWTSMALMVYRETISGGTVPTTEVVSQVLG 885
Query: 2679 CLKLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFGEYDPRAFSLLEEAASLGIVPAV 2858
CL+LPHD LRDRL+ LG++ + K NI LVDGFGEYDPRAFSLLEEA SLG++P+V
Sbjct: 886 CLQLPHDAALRDRLISTLGINISSQKQHNIFPLVDGFGEYDPRAFSLLEEATSLGVLPSV 945
Query: 2859 SLKQSPIIVDVRNLQVHTAEVYLLTVLKGLKHRLAGGAKLPNLSILLPLEKTQIQTPKGE 3038
S + P+ D L + AEVYLLT+ KGLKHRLA GAK+P++++++ +++ +I+TP+GE
Sbjct: 946 SFNKIPLFFDTTELPKNVAEVYLLTIFKGLKHRLAAGAKIPHINLIISIQEKEIRTPEGE 1005
Query: 3039 KTINIAGRISQAIAALLRRLGLTYLGNESRGKIRVNGVVVKKWFQPKLDSPLI-RNPADL 3215
KTI++ GR+ Q I ALLRRL + Y +SR +R+NGV +K WFQPKLDSP P DL
Sbjct: 1006 KTIDLTGRVGQEIGALLRRLDIPYHRKDSR--LRINGVSLKNWFQPKLDSPFSGGKPGDL 1063
Query: 3216 GLSQRRLGKGISFQQRDIRTGNLSL 3290
SQ LG IS QQR IR GNLSL
Sbjct: 1064 RSSQVPLGNQISRQQRSIRLGNLSL 1088
Score = 267 bits (683), Expect(2) = 0.0
Identities = 146/290 (50%), Positives = 193/290 (66%), Gaps = 5/290 (1%)
Frame = +2
Query: 914 IYRDNLRQDLYTFY--EPLKANVNNLGALPSITSFQENGRPSPFKSFTADAA--KVFVRS 1081
I+ ++ R++++TFY A + L +L +++ + S F + F
Sbjct: 274 IFAESKREEIHTFYGSNHSSAKSSRLPSLKAVSPAVTSATNSLFLDHKNNGVIDTQFPGQ 333
Query: 1082 ELLHHTESREGERDLAHYQGDSFNGRKDMEKGKEVPANKETKTFHQHRPTDSFPSHNLKR 1261
T + E +AH G + RKD++ + P++ + FP+ N +
Sbjct: 334 SSGQATGDVQEENLVAHSNGGVSHIRKDVKGDWKFPSDGKHVGHQIDESMPQFPARNFEL 393
Query: 1262 KQIHHLSHQFG-AYNRLLKDGRLGDCIDLLEDMENKGLLDMNKVYHAGFFRACKSQKAVK 1438
+ S + AYNRLL+DGR+ DCI LLED++ + LLDM+K+YHA FF+ACK Q+AVK
Sbjct: 394 HNSNGRSPETSDAYNRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVK 453
Query: 1439 EAFRFTKLIQNPTLSTFNMLMSVCASSQDAEGAFQVLQLVQDAGLKVDCKLYTTLISTCA 1618
EAFRFTKLI NPT+STFNMLMSVCASSQD EGA VL+LVQ++G+ DCKLYTTLIS+CA
Sbjct: 454 EAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCA 513
Query: 1619 KSGKVDTMFEVFHEMVNAGVEPNNHTYGALIDGCAKAGQVAKAFGAYGIM 1768
KSGKVD MFEVFH+M N+GVE N HT+GALIDGCA+AGQVAKAFGAYGI+
Sbjct: 514 KSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Score = 89.7 bits (221), Expect = 9e-15
Identities = 78/380 (20%), Positives = 157/380 (41%), Gaps = 41/380 (10%)
Frame = +3
Query: 1836 IDPDHVTVGALMKACAKAGQVDRAREVYKMIDEYGIRGTPEVYTIAVNCCSQTGDWEFAC 2015
++P T LM CA + ++ AR V +++ E G+ ++YT ++ C+++G +
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 2016 SIYNDMT-----------------------------------SKGVSPDEMFISAWIDVA 2090
+++ M+ SK V PD + +A I
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 2091 GHAGNLDAAFEIIQAARKE--GIHAGIIAYSSLMGACCNARDWQKALQLYEDVKEMNMKL 2264
G +G +D AF+++ + E I I+ +LM ACCNA ++A ++Y+ + + ++
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 2265 TVSMMNALLTALCDVDQLQKATNILFELKKQGVRPNTITYSILLVASEKMDDLEVGLMLL 2444
T + + + A +I ++K++ V P+ + +S L+ + L+ +L
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGIL 702
Query: 2445 SQAKKDGVAPNLVMCRCIIGMCLRRFQKACIVGDPVLSLTPGRLQLDNQWTSFALRIYRE 2624
AK G+ + ++G C C D W AL +Y +
Sbjct: 703 QDAKSQGIRLGTISYSSLMGAC-------CNAKD---------------WKK-ALELYEK 739
Query: 2625 AIAAGLAPTAEELSQVLGCL----KLPHDVNLRDRLVENLGVSTNPSKGSNICSLVDGFG 2792
+ L PT ++ ++ L +LP + D ++ LG+ N S + +
Sbjct: 740 IKSIKLRPTISTMNALITALCEGNQLPKAMEYLDE-IKTLGLKPNTITYSMLMLASERKD 798
Query: 2793 EYDPRAFSLLEEAASLGIVP 2852
+++ +F LL +A G+ P
Sbjct: 799 DFEV-SFKLLSQAKGDGVSP 817