BLASTX nr result
ID: Catharanthus22_contig00000927
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00000927
(1003 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-b... 188 1e-93
ref|XP_006436282.1| hypothetical protein CICLE_v10032568mg [Citr... 186 6e-93
gb|EMJ02438.1| hypothetical protein PRUPE_ppa010511mg [Prunus pe... 186 1e-92
ref|XP_006345799.1| PREDICTED: chlorophyll a-b binding protein 6... 184 1e-92
gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopers... 184 1e-92
gb|EOY18616.1| Light-harvesting complex I protein Lhca1 isoform ... 189 2e-92
ref|XP_002533251.1| chlorophyll A/B binding protein, putative [R... 184 4e-92
gb|EXB80094.1| Chlorophyll a-b binding protein 6A [Morus notabilis] 184 5e-92
ref|XP_004307395.1| PREDICTED: chlorophyll a-b binding protein 6... 183 9e-92
ref|XP_006345801.1| PREDICTED: chlorophyll a-b binding protein 6... 184 1e-91
ref|XP_006403520.1| hypothetical protein EUTSA_v10010669mg [Eutr... 187 1e-91
ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6... 184 1e-91
ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6... 181 7e-91
ref|XP_002312019.1| putative chlorophyll a/b-binding family prot... 183 7e-91
ref|XP_002878004.1| hypothetical protein ARALYDRAFT_485905 [Arab... 182 1e-90
ref|XP_006291772.1| hypothetical protein CARUB_v10017942mg [Caps... 182 2e-90
ref|XP_006599410.1| PREDICTED: chlorophyll a-b binding protein 6... 179 8e-90
ref|NP_191049.1| chlorophyll a-b binding protein 6 [Arabidopsis ... 182 1e-89
ref|XP_002315298.1| putative chlorophyll a/b-binding family prot... 180 1e-89
ref|NP_001234032.1| chlorophyll a-b binding protein 6A, chloropl... 179 2e-89
>emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-binding protein
[Nicotiana tabacum]
Length = 245
Score = 188 bits (477), Expect(2) = 1e-93
Identities = 89/124 (71%), Positives = 94/124 (75%)
Frame = +3
Query: 309 MAANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAAANGSAKMSADWMPGQPRPPYLD 488
MA+NTLMSCG+AAV G + N MSA+WMPGQPRPPYLD
Sbjct: 1 MASNTLMSCGIAAVSPSVLSSSYSKFAVAVPVCVGAVSGNSRFSMSAEWMPGQPRPPYLD 60
Query: 489 GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWA 668
GSAPGDFGFDPL LGEVP NLERYKESELIHCRWAMLAVPGILVPEALG GNWVKAQEWA
Sbjct: 61 GSAPGDFGFDPLGLGEVPSNLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA 120
Query: 669 AVPG 680
A+PG
Sbjct: 121 AIPG 124
Score = 183 bits (464), Expect(2) = 1e-93
Identities = 87/95 (91%), Positives = 89/95 (93%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP KFEELKVKEIKNGRLALLAFVGFCVQ
Sbjct: 150 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQ 209
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIPTSLL 994
QSAYPGTGPLENLATHLADPWH NIG +II +L
Sbjct: 210 QSAYPGTGPLENLATHLADPWHNNIGDVIILRGIL 244
>ref|XP_006436282.1| hypothetical protein CICLE_v10032568mg [Citrus clementina]
gi|568864996|ref|XP_006485870.1| PREDICTED: chlorophyll
a-b binding protein 6, chloroplastic-like [Citrus
sinensis] gi|557538478|gb|ESR49522.1| hypothetical
protein CICLE_v10032568mg [Citrus clementina]
Length = 245
Score = 186 bits (473), Expect(2) = 6e-93
Identities = 89/124 (71%), Positives = 93/124 (75%)
Frame = +3
Query: 309 MAANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAAANGSAKMSADWMPGQPRPPYLD 488
MA+NTLMSCG+A A A MSADWMPG+PRPPYLD
Sbjct: 1 MASNTLMSCGIATTAFPSVLSSSKSKFFTAVSLPAAANATSKYAMSADWMPGEPRPPYLD 60
Query: 489 GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWA 668
GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALG GNWV+AQEWA
Sbjct: 61 GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWA 120
Query: 669 AVPG 680
AVPG
Sbjct: 121 AVPG 124
Score = 182 bits (462), Expect(2) = 6e-93
Identities = 85/95 (89%), Positives = 89/95 (93%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
IAFVEHQRSMEKDPEKKKYPGGAFDPLG+SKDP KFEE KVKEIKNGRLALLAFVGFCVQ
Sbjct: 150 IAFVEHQRSMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 209
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIPTSLL 994
QSAYPGTGPLENLATHLADPWH NIG +IIP ++
Sbjct: 210 QSAYPGTGPLENLATHLADPWHNNIGDVIIPRGIV 244
>gb|EMJ02438.1| hypothetical protein PRUPE_ppa010511mg [Prunus persica]
Length = 247
Score = 186 bits (473), Expect(2) = 1e-92
Identities = 91/126 (72%), Positives = 96/126 (76%), Gaps = 2/126 (1%)
Frame = +3
Query: 309 MAANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAAANGSAK--MSADWMPGQPRPPY 482
MA+NTLMSCG+A AN S++ MSADWMPGQPRPPY
Sbjct: 1 MASNTLMSCGIATTAFPSVLSSSKSKFATSAVQLPSVGANASSRFSMSADWMPGQPRPPY 60
Query: 483 LDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQE 662
LDGSAPGDFGFDPLRLGEVPENLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQE
Sbjct: 61 LDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 120
Query: 663 WAAVPG 680
WAAVPG
Sbjct: 121 WAAVPG 126
Score = 181 bits (459), Expect(2) = 1e-92
Identities = 86/95 (90%), Positives = 88/95 (92%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP KFEE KVKEIKNGRLALLAFVGF VQ
Sbjct: 152 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKFEEYKVKEIKNGRLALLAFVGFVVQ 211
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIPTSLL 994
QSAYPGTGPLENLATHLADPWH NIG +IIP +L
Sbjct: 212 QSAYPGTGPLENLATHLADPWHNNIGDVIIPKGIL 246
>ref|XP_006345799.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Solanum tuberosum]
Length = 246
Score = 184 bits (466), Expect(2) = 1e-92
Identities = 87/124 (70%), Positives = 92/124 (74%)
Frame = +3
Query: 309 MAANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAAANGSAKMSADWMPGQPRPPYLD 488
MA+NTLMSCG+ AVC G + MS+DWMPGQPRP YLD
Sbjct: 1 MASNTLMSCGIPAVCPSFLSSSKSKFAAAMPVSVGATNSMSRFSMSSDWMPGQPRPSYLD 60
Query: 489 GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWA 668
GSAPGDFGFDPL GEVPENLERYKESELIHCRWAMLAVPGILVPEALG GNWVKAQEWA
Sbjct: 61 GSAPGDFGFDPLGFGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA 120
Query: 669 AVPG 680
A+PG
Sbjct: 121 AIPG 124
Score = 184 bits (466), Expect(2) = 1e-92
Identities = 86/94 (91%), Positives = 89/94 (94%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
IAFVEHQRSMEKD EKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ
Sbjct: 150 IAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 209
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIPTSL 991
QSAYPGTGPLENLATHLADPWH NIG ++IP +
Sbjct: 210 QSAYPGTGPLENLATHLADPWHNNIGDVVIPKGI 243
>gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
gi|225895|prf||1402358A photosystem I protein CAB
Length = 246
Score = 184 bits (467), Expect(2) = 1e-92
Identities = 87/94 (92%), Positives = 89/94 (94%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
IAFVEHQRSMEKD EKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ
Sbjct: 150 IAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 209
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIPTSL 991
QSAYPGTGPLENLATHLADPWH NIG +IIP +
Sbjct: 210 QSAYPGTGPLENLATHLADPWHNNIGDVIIPKGI 243
Score = 183 bits (465), Expect(2) = 1e-92
Identities = 87/124 (70%), Positives = 92/124 (74%)
Frame = +3
Query: 309 MAANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAAANGSAKMSADWMPGQPRPPYLD 488
MA+NTLMSCG+ AVC G + MSADWMPGQPRP YLD
Sbjct: 1 MASNTLMSCGIPAVCPSFLSSTKSKFAAAMPVSVGATNSMSRFSMSADWMPGQPRPSYLD 60
Query: 489 GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWA 668
GSAPGDFGFDPL LGEVP NLERYKESELIHCRWAMLAVPGI+VPEALG GNWVKAQEWA
Sbjct: 61 GSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWA 120
Query: 669 AVPG 680
A+PG
Sbjct: 121 AIPG 124
>gb|EOY18616.1| Light-harvesting complex I protein Lhca1 isoform 1 [Theobroma
cacao]
Length = 245
Score = 189 bits (480), Expect(2) = 2e-92
Identities = 96/126 (76%), Positives = 99/126 (78%), Gaps = 2/126 (1%)
Frame = +3
Query: 309 MAANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAAANGSAK--MSADWMPGQPRPPY 482
MAANTLMSCG+A GV A NGS + MSADWMPGQPRPPY
Sbjct: 1 MAANTLMSCGIATA-FPSVLSSSKSKFAAAVQLPGVGA-NGSHRVSMSADWMPGQPRPPY 58
Query: 483 LDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQE 662
LDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQE
Sbjct: 59 LDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQE 118
Query: 663 WAAVPG 680
WAA+PG
Sbjct: 119 WAAIPG 124
Score = 178 bits (451), Expect(2) = 2e-92
Identities = 85/94 (90%), Positives = 87/94 (92%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
IAFVEHQRSMEKD E+KKYPGGAFDPLGYSKDP KFEE KVKEIKNGRLALLAFVGFCVQ
Sbjct: 150 IAFVEHQRSMEKDTERKKYPGGAFDPLGYSKDPKKFEEYKVKEIKNGRLALLAFVGFCVQ 209
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIPTSL 991
QSA PGTGPLENLATHLADPWH NIG IIIP S+
Sbjct: 210 QSARPGTGPLENLATHLADPWHNNIGEIIIPRSI 243
>ref|XP_002533251.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223526931|gb|EEF29136.1| chlorophyll A/B binding
protein, putative [Ricinus communis]
Length = 244
Score = 184 bits (468), Expect(2) = 4e-92
Identities = 88/93 (94%), Positives = 88/93 (94%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKF E KVKEIKNGRLALLAFVG CVQ
Sbjct: 149 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFHEYKVKEIKNGRLALLAFVGICVQ 208
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIPTS 988
QSAYPGTGPLENLATHLADPWH NIG IIIPTS
Sbjct: 209 QSAYPGTGPLENLATHLADPWHNNIGDIIIPTS 241
Score = 181 bits (460), Expect(2) = 4e-92
Identities = 90/127 (70%), Positives = 95/127 (74%), Gaps = 3/127 (2%)
Frame = +3
Query: 309 MAANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAAANGSAK---MSADWMPGQPRPP 479
MA NTLMSCG+A + NGS+ MSADWMPGQPRPP
Sbjct: 1 MATNTLMSCGIATAFPSLLSSSKSKFASSVP----LPCVNGSSSRITMSADWMPGQPRPP 56
Query: 480 YLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQ 659
YLDGSAPGDFGFDPLRLGEVPENLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQ
Sbjct: 57 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 116
Query: 660 EWAAVPG 680
EWAA+PG
Sbjct: 117 EWAAIPG 123
>gb|EXB80094.1| Chlorophyll a-b binding protein 6A [Morus notabilis]
Length = 245
Score = 184 bits (467), Expect(2) = 5e-92
Identities = 90/124 (72%), Positives = 93/124 (75%)
Frame = +3
Query: 309 MAANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAAANGSAKMSADWMPGQPRPPYLD 488
MAANTLMSCG+A A+ MSADWMPGQPRPPYLD
Sbjct: 1 MAANTLMSCGIATAFPSVLSSSKSKFATSGQLPGVGVNASSRFTMSADWMPGQPRPPYLD 60
Query: 489 GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWA 668
GSAPGDFGFDPLRLGEVPENLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQEWA
Sbjct: 61 GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA 120
Query: 669 AVPG 680
AVPG
Sbjct: 121 AVPG 124
Score = 181 bits (460), Expect(2) = 5e-92
Identities = 87/95 (91%), Positives = 89/95 (93%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP KF+E KVKEIKNGRLALLAFVGF VQ
Sbjct: 150 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKFKEYKVKEIKNGRLALLAFVGFVVQ 209
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIPTSLL 994
QSAYPGTGPLENLATHLADPWH NIG IIIP S+L
Sbjct: 210 QSAYPGTGPLENLATHLADPWHNNIGDIIIPRSIL 244
>ref|XP_004307395.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 247
Score = 183 bits (464), Expect(2) = 9e-92
Identities = 89/125 (71%), Positives = 95/125 (76%), Gaps = 1/125 (0%)
Frame = +3
Query: 309 MAANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAA-ANGSAKMSADWMPGQPRPPYL 485
MA+NTLMSCG+A V A A+ MSA+WMPGQPRPPYL
Sbjct: 1 MASNTLMSCGIATTAFPSVLSSSKSKFATAVQLPSVGANASSRFSMSAEWMPGQPRPPYL 60
Query: 486 DGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEW 665
DGSAPGDFGFDPLRLGEVPENLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQEW
Sbjct: 61 DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
Query: 666 AAVPG 680
AA+PG
Sbjct: 121 AALPG 125
Score = 182 bits (461), Expect(2) = 9e-92
Identities = 87/95 (91%), Positives = 88/95 (92%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP KFEE KVKE+KNGRLALLAFVGF VQ
Sbjct: 151 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKFEEYKVKEVKNGRLALLAFVGFVVQ 210
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIPTSLL 994
QSAYPGTGPLENLATHLADPWH NIG IIIP LL
Sbjct: 211 QSAYPGTGPLENLATHLADPWHNNIGDIIIPKGLL 245
>ref|XP_006345801.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Solanum tuberosum]
Length = 246
Score = 184 bits (466), Expect(2) = 1e-91
Identities = 86/94 (91%), Positives = 89/94 (94%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
IAFVEHQRSMEKD EKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ
Sbjct: 150 IAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 209
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIPTSL 991
QSAYPGTGPLENLATHLADPWH NIG ++IP +
Sbjct: 210 QSAYPGTGPLENLATHLADPWHNNIGDVVIPKGI 243
Score = 181 bits (458), Expect(2) = 1e-91
Identities = 87/124 (70%), Positives = 91/124 (73%)
Frame = +3
Query: 309 MAANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAAANGSAKMSADWMPGQPRPPYLD 488
MA+NTLMS G+A VC GV MSADWMPGQPRP YLD
Sbjct: 1 MASNTLMSYGIAPVCPSILSASKSKFVTALPVSAGVTNDTSRFTMSADWMPGQPRPSYLD 60
Query: 489 GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWA 668
GSAPGDFGFDPL GEVPENLERYKESELIHCRWAMLAVPGI+VPEALG GNWVKAQEWA
Sbjct: 61 GSAPGDFGFDPLGFGEVPENLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWA 120
Query: 669 AVPG 680
A+PG
Sbjct: 121 AIPG 124
>ref|XP_006403520.1| hypothetical protein EUTSA_v10010669mg [Eutrema salsugineum]
gi|312282193|dbj|BAJ33962.1| unnamed protein product
[Thellungiella halophila] gi|557104639|gb|ESQ44973.1|
hypothetical protein EUTSA_v10010669mg [Eutrema
salsugineum]
Length = 241
Score = 187 bits (474), Expect(2) = 1e-91
Identities = 88/91 (96%), Positives = 89/91 (97%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP KFEELKVKEIKNGRLALLAFVGFCVQ
Sbjct: 149 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQ 208
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIP 982
QSAYPGTGPLENLATHLADPWHKNIG I+IP
Sbjct: 209 QSAYPGTGPLENLATHLADPWHKNIGDIVIP 239
Score = 177 bits (450), Expect(2) = 1e-91
Identities = 89/128 (69%), Positives = 96/128 (75%), Gaps = 4/128 (3%)
Frame = +3
Query: 309 MAANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAAAN----GSAKMSADWMPGQPRP 476
MA+N+LMSCG+AAV GV N G +M+A WMPG+PRP
Sbjct: 1 MASNSLMSCGIAAV-----YPSLLSSSKSKFVSAGVPLPNAGNVGRIRMAAHWMPGEPRP 55
Query: 477 PYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKA 656
YLDGSAPGDFGFDPL LGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKA
Sbjct: 56 AYLDGSAPGDFGFDPLGLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKA 115
Query: 657 QEWAAVPG 680
QEWAA+PG
Sbjct: 116 QEWAALPG 123
>ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Cucumis sativus] gi|449525097|ref|XP_004169556.1|
PREDICTED: chlorophyll a-b binding protein 6A,
chloroplastic-like [Cucumis sativus]
Length = 246
Score = 184 bits (466), Expect(2) = 1e-91
Identities = 90/125 (72%), Positives = 95/125 (76%), Gaps = 1/125 (0%)
Frame = +3
Query: 309 MAANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAA-ANGSAKMSADWMPGQPRPPYL 485
MA+NTLMSCG+A GVA A+ MSA+WMPGQPRPPYL
Sbjct: 1 MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
Query: 486 DGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEW 665
DGSAPGDFGFDPL LGEVPENLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQEW
Sbjct: 61 DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
Query: 666 AAVPG 680
AAVPG
Sbjct: 121 AAVPG 125
Score = 180 bits (457), Expect(2) = 1e-91
Identities = 85/94 (90%), Positives = 88/94 (93%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP K +E KVKEIKNGRLALLAFVGFCVQ
Sbjct: 151 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQ 210
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIPTSL 991
QSAYPGTGPLENLATHLADPWH NIG IIIP ++
Sbjct: 211 QSAYPGTGPLENLATHLADPWHNNIGDIIIPRTI 244
>ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic
isoform 1 [Vitis vinifera] gi|147800947|emb|CAN75566.1|
hypothetical protein VITISV_032585 [Vitis vinifera]
Length = 244
Score = 181 bits (459), Expect(2) = 7e-91
Identities = 88/124 (70%), Positives = 93/124 (75%)
Frame = +3
Query: 309 MAANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAAANGSAKMSADWMPGQPRPPYLD 488
MA+ L SCGVAAV AA + MSADWMPGQPRPPYLD
Sbjct: 1 MASTVLRSCGVAAVAPSLLSSSKSKFATSLPLP-NAAAGSARVTMSADWMPGQPRPPYLD 59
Query: 489 GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWA 668
GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPG+LVPEALG GNWV+AQEWA
Sbjct: 60 GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGVLVPEALGLGNWVQAQEWA 119
Query: 669 AVPG 680
A+PG
Sbjct: 120 AIPG 123
Score = 181 bits (458), Expect(2) = 7e-91
Identities = 84/95 (88%), Positives = 89/95 (93%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
IAFVEHQRSMEKD EKKKYPGGAFDPLGYSKDP KFEE KVKEIKNGRLA+LAFVGFCVQ
Sbjct: 149 IAFVEHQRSMEKDTEKKKYPGGAFDPLGYSKDPVKFEEYKVKEIKNGRLAILAFVGFCVQ 208
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIPTSLL 994
QSAYPGTGPLENLA+HLADPWH NIG +IIP S++
Sbjct: 209 QSAYPGTGPLENLASHLADPWHNNIGDVIIPRSIM 243
>ref|XP_002312019.1| putative chlorophyll a/b-binding family protein [Populus
trichocarpa] gi|222851839|gb|EEE89386.1| putative
chlorophyll a/b-binding family protein [Populus
trichocarpa]
Length = 244
Score = 183 bits (464), Expect(2) = 7e-91
Identities = 86/94 (91%), Positives = 89/94 (94%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
IAFVEHQRSMEKDPEKKKYPGGAFDPLG+SKDP KFEE KVKEIKNGRLALLAFVGFCVQ
Sbjct: 149 IAFVEHQRSMEKDPEKKKYPGGAFDPLGFSKDPKKFEEYKVKEIKNGRLALLAFVGFCVQ 208
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIPTSL 991
QSAYPGTGPLENLATHLADPWH NIG II+P +L
Sbjct: 209 QSAYPGTGPLENLATHLADPWHNNIGDIIVPRTL 242
Score = 179 bits (453), Expect(2) = 7e-91
Identities = 87/125 (69%), Positives = 95/125 (76%), Gaps = 2/125 (1%)
Frame = +3
Query: 312 AANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAAANGSAK--MSADWMPGQPRPPYL 485
A NTLMSCG+A + + NG+++ MSADW+PGQPRPPYL
Sbjct: 3 ATNTLMSCGIATAFPSLLSSSKSKFASSIP----LPSVNGTSRVTMSADWLPGQPRPPYL 58
Query: 486 DGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEW 665
DGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGIL+PEALG GNWVKAQEW
Sbjct: 59 DGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILIPEALGLGNWVKAQEW 118
Query: 666 AAVPG 680
AA PG
Sbjct: 119 AAAPG 123
>ref|XP_002878004.1| hypothetical protein ARALYDRAFT_485905 [Arabidopsis lyrata subsp.
lyrata] gi|297323842|gb|EFH54263.1| hypothetical protein
ARALYDRAFT_485905 [Arabidopsis lyrata subsp. lyrata]
Length = 241
Score = 182 bits (463), Expect(2) = 1e-90
Identities = 86/91 (94%), Positives = 87/91 (95%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP K EELKVKEIKNGRLALLAFVGFCVQ
Sbjct: 149 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQ 208
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIP 982
QSAYPGTGPLENLATHLADPWH NIG I+IP
Sbjct: 209 QSAYPGTGPLENLATHLADPWHNNIGDIVIP 239
Score = 179 bits (453), Expect(2) = 1e-90
Identities = 90/128 (70%), Positives = 96/128 (75%), Gaps = 4/128 (3%)
Frame = +3
Query: 309 MAANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAAAN----GSAKMSADWMPGQPRP 476
MA+N+LMSCG+AAV GV N G +M+A WMPG+PRP
Sbjct: 1 MASNSLMSCGIAAV-----YPSLLSSSKSKFVSAGVPLPNAGNVGRIRMAAHWMPGEPRP 55
Query: 477 PYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKA 656
YLDGSAPGDFGFDPL LGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKA
Sbjct: 56 AYLDGSAPGDFGFDPLGLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKA 115
Query: 657 QEWAAVPG 680
QEWAAVPG
Sbjct: 116 QEWAAVPG 123
>ref|XP_006291772.1| hypothetical protein CARUB_v10017942mg [Capsella rubella]
gi|482560479|gb|EOA24670.1| hypothetical protein
CARUB_v10017942mg [Capsella rubella]
Length = 241
Score = 182 bits (463), Expect(2) = 2e-90
Identities = 86/91 (94%), Positives = 87/91 (95%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP K EELKVKEIKNGRLALLAFVGFCVQ
Sbjct: 149 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQ 208
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIP 982
QSAYPGTGPLENLATHLADPWH NIG I+IP
Sbjct: 209 QSAYPGTGPLENLATHLADPWHNNIGDIVIP 239
Score = 177 bits (450), Expect(2) = 2e-90
Identities = 89/128 (69%), Positives = 96/128 (75%), Gaps = 4/128 (3%)
Frame = +3
Query: 309 MAANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAAAN----GSAKMSADWMPGQPRP 476
MA+N+LMSCG+AAV GV N G +M+A WMPG+PRP
Sbjct: 1 MASNSLMSCGIAAV-----YPSLLSSSKSKFVSAGVPLPNAGNVGRIRMAAHWMPGEPRP 55
Query: 477 PYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKA 656
YLDGSAPGDFGFDPL LGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKA
Sbjct: 56 AYLDGSAPGDFGFDPLGLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKA 115
Query: 657 QEWAAVPG 680
QEWAA+PG
Sbjct: 116 QEWAALPG 123
>ref|XP_006599410.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Glycine max]
Length = 290
Score = 179 bits (454), Expect(2) = 8e-90
Identities = 90/126 (71%), Positives = 95/126 (75%), Gaps = 1/126 (0%)
Frame = +3
Query: 306 KMAANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAAANGSA-KMSADWMPGQPRPPY 482
+MAANTLMS ++A V A+ S MSADWMPGQPRPPY
Sbjct: 44 RMAANTLMSSAISAFPSLLSSSKSRFAAAVPLSSFVVTNASSSRFSMSADWMPGQPRPPY 103
Query: 483 LDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQE 662
LDGSAPGDFGFDPLRLGEVPENLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQE
Sbjct: 104 LDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 163
Query: 663 WAAVPG 680
WAAVPG
Sbjct: 164 WAAVPG 169
Score = 179 bits (454), Expect(2) = 8e-90
Identities = 84/95 (88%), Positives = 87/95 (91%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
I+FVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP F E KVKEIKNGRLALLAFVGFCVQ
Sbjct: 195 ISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKTFHEYKVKEIKNGRLALLAFVGFCVQ 254
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIPTSLL 994
QSAYPGTGPLENLA HLADPWH NIG +IIP S+L
Sbjct: 255 QSAYPGTGPLENLAAHLADPWHNNIGNVIIPQSIL 289
>ref|NP_191049.1| chlorophyll a-b binding protein 6 [Arabidopsis thaliana]
gi|75220543|sp|Q01667.1|CAB6_ARATH RecName:
Full=Chlorophyll a-b binding protein 6, chloroplastic;
AltName: Full=LHCI-730; AltName: Full=LHCII type III
CAB-6; AltName: Full=Light-harvesting complex protein
Lhca1; Flags: Precursor gi|268612158|pdb|2WSC|1 Chain 1,
Improved Model Of Plant Photosystem I
gi|268612176|pdb|2WSE|1 Chain 1, Improved Model Of Plant
Photosystem I gi|268612194|pdb|2WSF|1 Chain 1, Improved
Model Of Plant Photosystem I
gi|11762180|gb|AAG40368.1|AF325016_1 AT3g54890
[Arabidopsis thaliana]
gi|11908038|gb|AAG41448.1|AF326866_1 putative
chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|12642856|gb|AAK00370.1|AF339688_1 putative
chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|13605732|gb|AAK32859.1|AF361847_1
AT3g54890/F28P10_130 [Arabidopsis thaliana]
gi|16207|emb|CAA39534.1| chlorophyll A/B-binding protein
[Arabidopsis thaliana] gi|166644|gb|AAA32759.1|
chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|4678304|emb|CAB41095.1| chlorophyll a/b-binding
protein [Arabidopsis thaliana]
gi|17979245|gb|AAL49939.1| AT3g54890/F28P10_130
[Arabidopsis thaliana] gi|20453135|gb|AAM19809.1|
AT3g54890/F28P10_130 [Arabidopsis thaliana]
gi|23507771|gb|AAN38689.1| At3g54890/F28P10_130
[Arabidopsis thaliana] gi|332645785|gb|AEE79306.1|
light-harvesting complex I chlorophyll a/b binding
protein 1 [Arabidopsis thaliana]
Length = 241
Score = 182 bits (463), Expect(2) = 1e-89
Identities = 86/91 (94%), Positives = 87/91 (95%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP K EELKVKEIKNGRLALLAFVGFCVQ
Sbjct: 149 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQ 208
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIP 982
QSAYPGTGPLENLATHLADPWH NIG I+IP
Sbjct: 209 QSAYPGTGPLENLATHLADPWHNNIGDIVIP 239
Score = 175 bits (444), Expect(2) = 1e-89
Identities = 88/128 (68%), Positives = 95/128 (74%), Gaps = 4/128 (3%)
Frame = +3
Query: 309 MAANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAAAN----GSAKMSADWMPGQPRP 476
MA+N+LMSCG+AAV GV N G +M+A WMPG+PRP
Sbjct: 1 MASNSLMSCGIAAV-----YPSLLSSSKSKFVSAGVPLPNAGNVGRIRMAAHWMPGEPRP 55
Query: 477 PYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKA 656
YLDGSAPGDFGFDPL LGEVP NLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKA
Sbjct: 56 AYLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKA 115
Query: 657 QEWAAVPG 680
QEWAA+PG
Sbjct: 116 QEWAALPG 123
>ref|XP_002315298.1| putative chlorophyll a/b-binding family protein [Populus
trichocarpa] gi|118489209|gb|ABK96411.1| unknown
[Populus trichocarpa x Populus deltoides]
gi|222864338|gb|EEF01469.1| putative chlorophyll
a/b-binding family protein [Populus trichocarpa]
Length = 243
Score = 180 bits (457), Expect(2) = 1e-89
Identities = 89/126 (70%), Positives = 96/126 (76%), Gaps = 2/126 (1%)
Frame = +3
Query: 309 MAANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAAANGSAK--MSADWMPGQPRPPY 482
MA NTLMSCG+A + + NG+++ MSA+WMPGQPRPPY
Sbjct: 1 MATNTLMSCGIATAFPSLLSSSKSKFASSIP----LPSVNGTSRVTMSANWMPGQPRPPY 56
Query: 483 LDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQE 662
LDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALG GNWVKAQE
Sbjct: 57 LDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 116
Query: 663 WAAVPG 680
WAA PG
Sbjct: 117 WAATPG 122
Score = 177 bits (449), Expect(2) = 1e-89
Identities = 83/94 (88%), Positives = 87/94 (92%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
IAFVEHQRSMEKD EKKKYPGGAFDPLGYSKDP KFEE KVKEIKNGRLALLAFVG CVQ
Sbjct: 148 IAFVEHQRSMEKDTEKKKYPGGAFDPLGYSKDPQKFEEYKVKEIKNGRLALLAFVGICVQ 207
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIPTSL 991
Q+AYPGTGPLENLATHLADPWH NIG ++IP S+
Sbjct: 208 QTAYPGTGPLENLATHLADPWHNNIGDVLIPRSV 241
>ref|NP_001234032.1| chlorophyll a-b binding protein 6A, chloroplastic [Solanum
lycopersicum] gi|115764|sp|P12360.1|CB11_SOLLC RecName:
Full=Chlorophyll a-b binding protein 6A, chloroplastic;
AltName: Full=LHCI type I CAB-6A; AltName:
Full=Light-harvesting complex I 26 kDa protein; Flags:
Precursor gi|170494|gb|AAA34186.1| chlorophyll a/b
binding protein precursor [Solanum lycopersicum]
Length = 246
Score = 179 bits (454), Expect(2) = 2e-89
Identities = 86/124 (69%), Positives = 90/124 (72%)
Frame = +3
Query: 309 MAANTLMSCGVAAVCXXXXXXXXXXXXXXXXXXXGVAAANGSAKMSADWMPGQPRPPYLD 488
MA+NTLMSCG+ AVC G MSADWMPGQPRP YLD
Sbjct: 1 MASNTLMSCGIPAVCPSFLSSTKSKFAAAMPVYVGATNFMSRFSMSADWMPGQPRPSYLD 60
Query: 489 GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWA 668
GSAPGDFGFD L LGEVP NLERYKESELIHCRWAMLAVPGI+VPEALG GNWVKAQEWA
Sbjct: 61 GSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWA 120
Query: 669 AVPG 680
A+PG
Sbjct: 121 AIPG 124
Score = 178 bits (451), Expect(2) = 2e-89
Identities = 85/94 (90%), Positives = 87/94 (92%)
Frame = +2
Query: 710 IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQ 889
IAFVEHQRSMEKD EKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLA VGFCVQ
Sbjct: 150 IAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQ 209
Query: 890 QSAYPGTGPLENLATHLADPWHKNIGAIIIPTSL 991
QSAY GTGPLENLATHLADPWH NIG +IIP +
Sbjct: 210 QSAYLGTGPLENLATHLADPWHNNIGDVIIPKGI 243