BLASTX nr result
ID: Catharanthus22_contig00000888
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00000888
(1499 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 168 5e-39
emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera] 163 2e-37
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 159 2e-36
gb|EXB65256.1| hypothetical protein L484_025334 [Morus notabilis] 159 4e-36
gb|AFB73911.1| polyprotein [Citrus sinensis] 158 5e-36
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 157 9e-36
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 156 2e-35
gb|AFB73912.1| polyprotein [Citrus sinensis] 155 3e-35
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi] 155 3e-35
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 154 9e-35
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 153 2e-34
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 153 2e-34
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 152 3e-34
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 152 3e-34
gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposo... 152 5e-34
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 148 7e-33
emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group] 146 2e-32
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 145 4e-32
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 145 6e-32
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 144 8e-32
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 168 bits (426), Expect = 5e-39
Identities = 84/171 (49%), Positives = 105/171 (61%)
Frame = +2
Query: 2 YINGTIDRGLLYHNWSNDFELVGYVDSDFAGDKDGRKSTSSYFFTLAGNCISWKSQLQPV 181
Y+ G++ GL + + + GYVDSD+ GD D R ST+ Y FTL G +SWKSQLQ +
Sbjct: 599 YVRGSLGVGLKFGSSKEGDGITGYVDSDYVGDLDKRXSTTGYIFTLFGGPVSWKSQLQSI 658
Query: 182 VALSXXXXXXXXXXXXXXXXXWLQGLLSELHVLKSKAVIFTDSQSCLHLCKNPVYHERTK 361
VALS WLQGL+ EL VL S IF DSQS + LC NP +H RTK
Sbjct: 659 VALSTTKAEYIAATEAMKEALWLQGLVKELXVLNSVVEIFLDSQSAIQLCNNPXFHXRTK 718
Query: 362 HIDVKYHFIREKVSSGLIDIEKISTNDNPADFGTKIVTTDKFSLCRDLLHI 514
HIDV+YHFIRE +SSG + +EKIS DNPAD TK++ KF DL+ +
Sbjct: 719 HIDVRYHFIRETISSGAMKLEKISXVDNPADMATKVLPVTKFKYSLDLVQV 769
>emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera]
Length = 1842
Score = 163 bits (412), Expect = 2e-37
Identities = 84/169 (49%), Positives = 108/169 (63%)
Frame = +2
Query: 2 YINGTIDRGLLYHNWSNDFELVGYVDSDFAGDKDGRKSTSSYFFTLAGNCISWKSQLQPV 181
Y+ G++ GL + ++GYVD D+AGD D R+ST+SY FTL G ++WKSQLQ +
Sbjct: 1674 YVRGSLGVGLKFGVSKEGASIIGYVDLDYAGDLDKRRSTTSYIFTLFGGPVNWKSQLQSI 1733
Query: 182 VALSXXXXXXXXXXXXXXXXXWLQGLLSELHVLKSKAVIFTDSQSCLHLCKNPVYHERTK 361
VALS WLQGL+ EL VL S IF+DSQS + LCKN V+HERTK
Sbjct: 1734 VALSTXEVEYITTTKAMKETLWLQGLVKELGVLNSVVEIFSDSQSTIQLCKNXVFHERTK 1793
Query: 362 HIDVKYHFIREKVSSGLIDIEKISTNDNPADFGTKIVTTDKFSLCRDLL 508
H++V+YHFIRE VSS + +EKIS DNP D TK++ KF DL+
Sbjct: 1794 HVNVRYHFIREIVSSRKMKLEKISLADNPIDMATKVLPVRKFXYYLDLV 1842
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 159 bits (403), Expect = 2e-36
Identities = 84/166 (50%), Positives = 102/166 (61%)
Frame = +2
Query: 2 YINGTIDRGLLYHNWSNDFELVGYVDSDFAGDKDGRKSTSSYFFTLAGNCISWKSQLQPV 181
YI GT D L Y +DF + GYVDSD+AGD D KST+ Y F +AG +SW S+LQ V
Sbjct: 1127 YIKGTSDVALCYGG--SDFIINGYVDSDYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQAV 1184
Query: 182 VALSXXXXXXXXXXXXXXXXXWLQGLLSELHVLKSKAVIFTDSQSCLHLCKNPVYHERTK 361
VA S WL+ LL EL + +F DSQS LHL +NP +H RTK
Sbjct: 1185 VATSTTEAEYVAATQASKEAIWLKMLLEELGHKQEFVSLFCDSQSALHLARNPAFHSRTK 1244
Query: 362 HIDVKYHFIREKVSSGLIDIEKISTNDNPADFGTKIVTTDKFSLCR 499
HI V+YHFIREKV G +D++KI T DN ADF TKI+ DKF+ CR
Sbjct: 1245 HIRVQYHFIREKVKEGTVDLQKIHTADNVADFLTKIINVDKFTWCR 1290
>gb|EXB65256.1| hypothetical protein L484_025334 [Morus notabilis]
Length = 987
Score = 159 bits (401), Expect = 4e-36
Identities = 74/131 (56%), Positives = 92/131 (70%)
Frame = +2
Query: 92 GDKDGRKSTSSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXXWLQGLLSEL 271
GD+D R+STS+Y TL GNCISWKSQLQ VVALS W+QGLLSEL
Sbjct: 101 GDRDRRQSTSAYMMTLDGNCISWKSQLQLVVALSSIEAEYIAGTKGFKEAIWIQGLLSEL 160
Query: 272 HVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLIDIEKISTNDNPA 451
+LK I+ DSQS +HLCKNP+YH++TKHIDV++HFIREKV G+I +EKI T DNP+
Sbjct: 161 KILKGNTTIYLDSQSAIHLCKNPIYHDKTKHIDVRHHFIREKVEEGIIKLEKIDTEDNPS 220
Query: 452 DFGTKIVTTDK 484
D TK + ++
Sbjct: 221 DMATKKIRPNR 231
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 158 bits (400), Expect = 5e-36
Identities = 82/162 (50%), Positives = 102/162 (62%)
Frame = +2
Query: 2 YINGTIDRGLLYHNWSNDFELVGYVDSDFAGDKDGRKSTSSYFFTLAGNCISWKSQLQPV 181
YI GT D L Y ++F + GYVDSDFAGD D RKST+ Y FTLAG +SW S+LQ V
Sbjct: 1138 YIRGTSDVALCYGG--SEFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGAAVSWVSKLQTV 1195
Query: 182 VALSXXXXXXXXXXXXXXXXXWLQGLLSELHVLKSKAVIFTDSQSCLHLCKNPVYHERTK 361
VALS W+Q LL EL + K ++F DSQS LH+ +NP +H RTK
Sbjct: 1196 VALSTTEAEYMAATQACKKAIWIQRLLEELGHKQQKILVFCDSQSALHIARNPAFHSRTK 1255
Query: 362 HIDVKYHFIREKVSSGLIDIEKISTNDNPADFGTKIVTTDKF 487
HI V+YHF+RE V G +D++KI T +N AD TK + TDKF
Sbjct: 1256 HIGVQYHFVREVVEDGSVDLQKIHTKENLADVLTKPINTDKF 1297
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 157 bits (398), Expect = 9e-36
Identities = 81/168 (48%), Positives = 103/168 (61%)
Frame = +2
Query: 2 YINGTIDRGLLYHNWSNDFELVGYVDSDFAGDKDGRKSTSSYFFTLAGNCISWKSQLQPV 181
YI GT G+ ++ + GYVDSDFAGD D RKST+ Y FTLAG +SW S+LQ V
Sbjct: 1134 YIKGT--SGVAVCFGGSELTVRGYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTV 1191
Query: 182 VALSXXXXXXXXXXXXXXXXXWLQGLLSELHVLKSKAVIFTDSQSCLHLCKNPVYHERTK 361
VALS W+Q L+ EL + + ++ DSQS LH+ +NP +H RTK
Sbjct: 1192 VALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALHIARNPAFHSRTK 1251
Query: 362 HIDVKYHFIREKVSSGLIDIEKISTNDNPADFGTKIVTTDKFSLCRDL 505
HI V+YHF+RE V G +D++KI TNDN AD TK + TDKF CR L
Sbjct: 1252 HIGVQYHFVREVVEEGSVDMQKIHTNDNLADAMTKSINTDKFIWCRSL 1299
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 156 bits (394), Expect = 2e-35
Identities = 80/166 (48%), Positives = 102/166 (61%)
Frame = +2
Query: 2 YINGTIDRGLLYHNWSNDFELVGYVDSDFAGDKDGRKSTSSYFFTLAGNCISWKSQLQPV 181
YI GT G+ ++ + GYVDSDFAGD D RKST+ Y FTLAG +SW S+LQ V
Sbjct: 1134 YIKGT--SGVAVCFGGSELTVWGYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTV 1191
Query: 182 VALSXXXXXXXXXXXXXXXXXWLQGLLSELHVLKSKAVIFTDSQSCLHLCKNPVYHERTK 361
VALS W+Q L+ EL + + ++ DSQS LH+ +NP +H RTK
Sbjct: 1192 VALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALHIARNPAFHSRTK 1251
Query: 362 HIDVKYHFIREKVSSGLIDIEKISTNDNPADFGTKIVTTDKFSLCR 499
HI V+YHF+RE V G +D++KI TNDN AD TK + TDKF CR
Sbjct: 1252 HIGVQYHFVREVVEEGSVDMQKIHTNDNLADVMTKPINTDKFVWCR 1297
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 155 bits (393), Expect = 3e-35
Identities = 81/162 (50%), Positives = 101/162 (62%)
Frame = +2
Query: 2 YINGTIDRGLLYHNWSNDFELVGYVDSDFAGDKDGRKSTSSYFFTLAGNCISWKSQLQPV 181
YI GT + L Y ++F + GYVDSDFAGD D RKST+ Y FTLAG +SW S+LQ V
Sbjct: 1138 YIRGTSNVALCYGG--SEFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGAAVSWVSKLQTV 1195
Query: 182 VALSXXXXXXXXXXXXXXXXXWLQGLLSELHVLKSKAVIFTDSQSCLHLCKNPVYHERTK 361
VALS W+Q LL EL + K +F DSQS LH+ +NP +H RTK
Sbjct: 1196 VALSTTEAEYMAATQACKEAIWIQRLLEELGHKQQKIPVFCDSQSALHIARNPAFHSRTK 1255
Query: 362 HIDVKYHFIREKVSSGLIDIEKISTNDNPADFGTKIVTTDKF 487
HI V+YHF+RE V G +D++KI T +N AD TK + TDKF
Sbjct: 1256 HIGVQYHFVREVVEDGSVDLQKIHTKENLADVLTKSINTDKF 1297
>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
Length = 297
Score = 155 bits (393), Expect = 3e-35
Identities = 78/171 (45%), Positives = 104/171 (60%)
Frame = +2
Query: 2 YINGTIDRGLLYHNWSNDFELVGYVDSDFAGDKDGRKSTSSYFFTLAGNCISWKSQLQPV 181
Y+ GT+D GLL+ + VGY DSDFAGD D ++STS Y FTL G +SW+S LQ
Sbjct: 124 YLYGTVDVGLLFKKNCGQ-QCVGYCDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQST 182
Query: 182 VALSXXXXXXXXXXXXXXXXXWLQGLLSELHVLKSKAVIFTDSQSCLHLCKNPVYHERTK 361
+ALS WL+GLL +L V++ +F D+QS + L KN YH RTK
Sbjct: 183 IALSTTEAEYIAATEAVKEAIWLKGLLGDLGVIQENIAVFCDNQSAIFLAKNQTYHARTK 242
Query: 362 HIDVKYHFIREKVSSGLIDIEKISTNDNPADFGTKIVTTDKFSLCRDLLHI 514
HIDVKYH++RE + G + ++KI T DNP+D TK+V+ KF C L+ I
Sbjct: 243 HIDVKYHYVREIIEGGDVLLKKIDTKDNPSDMLTKVVSEVKFQHCLKLIQI 293
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 154 bits (389), Expect = 9e-35
Identities = 79/166 (47%), Positives = 101/166 (60%)
Frame = +2
Query: 2 YINGTIDRGLLYHNWSNDFELVGYVDSDFAGDKDGRKSTSSYFFTLAGNCISWKSQLQPV 181
YI GT G+ ++ + GYVDSDFAGD D RKST+ Y FTLAG +SW S+LQ V
Sbjct: 1134 YIKGT--SGVAVCFGGSELTVRGYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTV 1191
Query: 182 VALSXXXXXXXXXXXXXXXXXWLQGLLSELHVLKSKAVIFTDSQSCLHLCKNPVYHERTK 361
VALS W+Q L+ EL + + ++ DSQS LH+ +NP +H RTK
Sbjct: 1192 VALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALHIARNPAFHSRTK 1251
Query: 362 HIDVKYHFIREKVSSGLIDIEKISTNDNPADFGTKIVTTDKFSLCR 499
HI V+YHF+RE V G +D++KI TNDN AD TK + DKF CR
Sbjct: 1252 HIGVQYHFVREVVEEGSVDMQKIHTNDNLADVMTKPINADKFVWCR 1297
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 153 bits (387), Expect = 2e-34
Identities = 79/171 (46%), Positives = 102/171 (59%)
Frame = +2
Query: 2 YINGTIDRGLLYHNWSNDFELVGYVDSDFAGDKDGRKSTSSYFFTLAGNCISWKSQLQPV 181
YI GT+D L Y ++DF + GY D+D+A D D R+S + FTL GN ISWKS LQ V
Sbjct: 1191 YIKGTVDTRLCYKR-NSDFSICGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRV 1249
Query: 182 VALSXXXXXXXXXXXXXXXXXWLQGLLSELHVLKSKAVIFTDSQSCLHLCKNPVYHERTK 361
VA S WL+GLL + + IF DSQS + L KN V+HERTK
Sbjct: 1250 VAQSSTECEYMSLTEAVKEAIWLKGLLKDFGYEQKNVEIFCDSQSAIALSKNNVHHERTK 1309
Query: 362 HIDVKYHFIREKVSSGLIDIEKISTNDNPADFGTKIVTTDKFSLCRDLLHI 514
HIDVK+HFIRE ++ G +++ KIST NPAD TK++ +KF D L +
Sbjct: 1310 HIDVKFHFIREIIADGKVEVSKISTEKNPADIFTKVLPVNKFQTALDFLRV 1360
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 153 bits (386), Expect = 2e-34
Identities = 79/166 (47%), Positives = 100/166 (60%)
Frame = +2
Query: 2 YINGTIDRGLLYHNWSNDFELVGYVDSDFAGDKDGRKSTSSYFFTLAGNCISWKSQLQPV 181
YI GT L + ++F + GYVDSDFAGD D RKST+ Y FTLAG +SW S+LQ V
Sbjct: 1134 YIRGTSGAALCFGG--SEFTIRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTV 1191
Query: 182 VALSXXXXXXXXXXXXXXXXXWLQGLLSELHVLKSKAVIFTDSQSCLHLCKNPVYHERTK 361
VALS W Q LL EL + K ++ DS S LH+ +NP +H RTK
Sbjct: 1192 VALSTTEAEYMAATQACKEAIWTQRLLEELGHKQQKITVYCDSPSALHIARNPAFHSRTK 1251
Query: 362 HIDVKYHFIREKVSSGLIDIEKISTNDNPADFGTKIVTTDKFSLCR 499
HI V+YHF+RE V G ++++KI T DN AD TK + +DKF CR
Sbjct: 1252 HIGVQYHFVREVVEEGSVNMQKIHTKDNLADVMTKPINSDKFIWCR 1297
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 152 bits (385), Expect = 3e-34
Identities = 78/166 (46%), Positives = 100/166 (60%)
Frame = +2
Query: 2 YINGTIDRGLLYHNWSNDFELVGYVDSDFAGDKDGRKSTSSYFFTLAGNCISWKSQLQPV 181
YI GT G+ ++ + GYVDSDFAGD D RKST+ Y FTL G +SW S+LQ V
Sbjct: 1134 YIKGT--SGVAVCFGGSELTVRGYVDSDFAGDHDKRKSTTGYVFTLTGGAVSWLSKLQTV 1191
Query: 182 VALSXXXXXXXXXXXXXXXXXWLQGLLSELHVLKSKAVIFTDSQSCLHLCKNPVYHERTK 361
VALS W+Q L+ EL + + ++ DSQS LH+ +NP +H RTK
Sbjct: 1192 VALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALHIARNPAFHSRTK 1251
Query: 362 HIDVKYHFIREKVSSGLIDIEKISTNDNPADFGTKIVTTDKFSLCR 499
HI V+YHF+RE V G +D++KI TNDN AD TK + DKF CR
Sbjct: 1252 HIGVQYHFVREVVEEGSVDMQKIHTNDNLADVMTKPINADKFVWCR 1297
>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 152 bits (385), Expect = 3e-34
Identities = 81/171 (47%), Positives = 101/171 (59%)
Frame = +2
Query: 2 YINGTIDRGLLYHNWSNDFELVGYVDSDFAGDKDGRKSTSSYFFTLAGNCISWKSQLQPV 181
YI GT+ L Y S+ F +VGY D+D+A D D R+S + FTL GN ISWKS LQ V
Sbjct: 1184 YIKGTLKTRLCYKK-SSSFSIVGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRV 1242
Query: 182 VALSXXXXXXXXXXXXXXXXXWLQGLLSELHVLKSKAVIFTDSQSCLHLCKNPVYHERTK 361
VA S WL+GLL + + IF DSQS + L KN V+HERTK
Sbjct: 1243 VAQSTTESEYMSLTEAVKEAIWLKGLLKDFGYEQKSVEIFCDSQSAIALSKNNVHHERTK 1302
Query: 362 HIDVKYHFIREKVSSGLIDIEKISTNDNPADFGTKIVTTDKFSLCRDLLHI 514
HIDVKYHFIRE +S G +++ KIST NPAD TK++ KF +LL +
Sbjct: 1303 HIDVKYHFIREIISDGTVEVLKISTEKNPADIFTKVLAVSKFQAALNLLRV 1353
>gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 1822
Score = 152 bits (383), Expect = 5e-34
Identities = 76/158 (48%), Positives = 104/158 (65%), Gaps = 1/158 (0%)
Frame = +2
Query: 2 YINGTIDRGLLYHNWSNDFE-LVGYVDSDFAGDKDGRKSTSSYFFTLAGNCISWKSQLQP 178
++ G + GLLY ND E L GYVD+DFAGD D R+S S Y FTL G +SWK+QLQ
Sbjct: 506 WVQGASNVGLLYKRMRNDGEKLRGYVDADFAGDLDKRRSLSGYIFTLFGCTVSWKAQLQL 565
Query: 179 VVALSXXXXXXXXXXXXXXXXXWLQGLLSELHVLKSKAVIFTDSQSCLHLCKNPVYHERT 358
VVALS WL+GL+ EL +++ + +F D+QS + L KN ++++RT
Sbjct: 566 VVALSTTEAEYIAATEGVKEAMWLKGLIGELGIVQDEVEVFCDNQSSILLTKNQMFYDRT 625
Query: 359 KHIDVKYHFIREKVSSGLIDIEKISTNDNPADFGTKIV 472
KHID+K HFIR+ +S G + +EKI T+DNPAD GT++V
Sbjct: 626 KHIDIKLHFIRDIISRGTVTLEKIHTDDNPADMGTRVV 663
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 148 bits (373), Expect = 7e-33
Identities = 81/172 (47%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 YINGTIDRGLLYHNWSND-FELVGYVDSDFAGDKDGRKSTSSYFFTLAGNCISWKSQLQP 178
Y+ G+ GLLY +D E++G+VDSDFAGD D RKSTS Y F L ISWKS LQ
Sbjct: 1158 YLKGSSTCGLLYGKTKSDKIEVMGFVDSDFAGDLDRRKSTSRYMFVLNSCLISWKSSLQS 1217
Query: 179 VVALSXXXXXXXXXXXXXXXXXWLQGLLSELHVLKSKAVIFTDSQSCLHLCKNPVYHERT 358
ALS WL+GLL+EL + + +F D+Q+ +HL KN +YHERT
Sbjct: 1218 GGALSSTEAEFIATTEAVKEAMWLRGLLNELWLNQKIVQVFCDNQNAIHLVKNQMYHERT 1277
Query: 359 KHIDVKYHFIREKVSSGLIDIEKISTNDNPADFGTKIVTTDKFSLCRDLLHI 514
KHIDVK FIR++V G + + KI T+ NPAD TK + T KF C +L+ I
Sbjct: 1278 KHIDVKLQFIRDEVGKGTVVVSKIHTSVNPADALTKSLPTAKFEFCVNLMGI 1329
>emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group]
Length = 293
Score = 146 bits (369), Expect = 2e-32
Identities = 78/171 (45%), Positives = 103/171 (60%)
Frame = +2
Query: 2 YINGTIDRGLLYHNWSNDFELVGYVDSDFAGDKDGRKSTSSYFFTLAGNCISWKSQLQPV 181
Y+ GT D L + D LVGYVDSDFA D D R+S + Y FT+ +SWK+ LQP+
Sbjct: 123 YLRGTTDACLKFGR--TDKGLVGYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQPI 180
Query: 182 VALSXXXXXXXXXXXXXXXXXWLQGLLSELHVLKSKAVIFTDSQSCLHLCKNPVYHERTK 361
VA S WL+GL +EL + S +F DSQS + L K+ ++HERTK
Sbjct: 181 VAQSTTEAEYMAIAEACKESVWLKGLFAELCGVDSCINLFCDSQSAICLTKDQMFHERTK 240
Query: 362 HIDVKYHFIREKVSSGLIDIEKISTNDNPADFGTKIVTTDKFSLCRDLLHI 514
HID+KYH++R+ V+ G + + KIST+DNPAD TK V KF LC L+ I
Sbjct: 241 HIDIKYHYVRDVVAQGKLKVCKISTHDNPADMMTKPVPVAKFELCSSLVGI 291
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 145 bits (366), Expect = 4e-32
Identities = 76/169 (44%), Positives = 103/169 (60%)
Frame = +2
Query: 2 YINGTIDRGLLYHNWSNDFELVGYVDSDFAGDKDGRKSTSSYFFTLAGNCISWKSQLQPV 181
Y+ GT L + +D L GY D+D AGD D RKS++ Y FT +G ISW+S+LQ
Sbjct: 1157 YLRGTTGDCLCFGG--SDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKC 1214
Query: 182 VALSXXXXXXXXXXXXXXXXXWLQGLLSELHVLKSKAVIFTDSQSCLHLCKNPVYHERTK 361
VALS WL+ L EL + + + V++ DSQS + L KN +YH RTK
Sbjct: 1215 VALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTK 1274
Query: 362 HIDVKYHFIREKVSSGLIDIEKISTNDNPADFGTKIVTTDKFSLCRDLL 508
HIDV+YH+IRE V + + KISTN+NPAD TK+V +KF LC++L+
Sbjct: 1275 HIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELV 1323
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 145 bits (365), Expect = 6e-32
Identities = 71/174 (40%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Frame = +2
Query: 2 YINGTIDRGLLYHNWSN-DFELVGYVDSDFAGDKDGRKSTSSYFFTLAGNCISWKSQLQP 178
Y+ GT GL+Y S + +L G+VD+D+AG+ D RKS + Y FT G +SWK+ LQ
Sbjct: 1034 YLAGTRSLGLVYGGNSQLETQLQGFVDADYAGNIDTRKSLTGYVFTXFGGAVSWKANLQS 1093
Query: 179 VVALSXXXXXXXXXXXXXXXXXWLQGLLSELHVLKSKAVIFTDSQSCLHLCKNPVYHERT 358
VVALS WL+G+ EL + + K V++ D+QS +HL KN +HER+
Sbjct: 1094 VVALSTTEAEYMAMTEAVKEAIWLKGITEELAMYRGKVVVYCDNQSAIHLAKNQSFHERS 1153
Query: 359 KHIDVKYHFIREKVSSGLIDIEKISTNDNPADFGTKIVTTDKFSLCRDLLHIDE 520
KHIDV+ HF+R+ +++G I + K+ T DNP+D TK + KF C +L+++ +
Sbjct: 1154 KHIDVRLHFVRDIIAAGEIGVGKVHTKDNPSDMLTKSLNVTKFKHCLNLINMGD 1207
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 144 bits (364), Expect = 8e-32
Identities = 75/151 (49%), Positives = 95/151 (62%)
Frame = +2
Query: 62 LVGYVDSDFAGDKDGRKSTSSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXX 241
LVGYVDSDFAGD D R+S + Y FT+ G +SWK+ LQ VALS
Sbjct: 986 LVGYVDSDFAGDLDRRRSLAGYVFTIGGCAVSWKANLQATVALSTTEAEYMAISEACKET 1045
Query: 242 XWLQGLLSELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLIDI 421
WL+GL +EL + S IF DSQS + L K+ ++HERTKHIDV+YHFIR ++ G + +
Sbjct: 1046 IWLRGLYTELCGVTSCINIFCDSQSAICLTKDQMFHERTKHIDVRYHFIRSVITEGDVKV 1105
Query: 422 EKISTNDNPADFGTKIVTTDKFSLCRDLLHI 514
KIST+DNPAD TK V KF LC L+ +
Sbjct: 1106 CKISTHDNPADMMTKPVPATKFELCSSLVGV 1136