BLASTX nr result
ID: Catharanthus22_contig00000867
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00000867 (1629 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004245850.1| PREDICTED: uncharacterized protein LOC101255... 67 2e-08 ref|XP_006358616.1| PREDICTED: mediator of RNA polymerase II tra... 65 8e-08 >ref|XP_004245850.1| PREDICTED: uncharacterized protein LOC101255818 [Solanum lycopersicum] Length = 348 Score = 67.4 bits (163), Expect = 2e-08 Identities = 44/81 (54%), Positives = 48/81 (59%) Frame = -2 Query: 299 MAVQAQYPSNVLLLNRTVQEGKSPLGNDFLLKPQIXXXXXXXXXXXXXXXXGTFLDHTTN 120 MAVQAQYPSNVL LNR VQEGK+PLGND+ L+ Q G+FLD T Sbjct: 1 MAVQAQYPSNVLFLNRNVQEGKTPLGNDYSLQSQ------------PGGGAGSFLDQ-TQ 47 Query: 119 MSFNHGVGTXXXXNLRKRGRE 57 M FN GVG RKRGRE Sbjct: 48 MLFNPGVGANS----RKRGRE 64 >ref|XP_006358616.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15-like [Solanum tuberosum] Length = 346 Score = 65.1 bits (157), Expect = 8e-08 Identities = 43/81 (53%), Positives = 46/81 (56%) Frame = -2 Query: 299 MAVQAQYPSNVLLLNRTVQEGKSPLGNDFLLKPQIXXXXXXXXXXXXXXXXGTFLDHTTN 120 MAVQAQYPSNVL LNR VQEGK PLGND+ L+ Q G+FLD T Sbjct: 1 MAVQAQYPSNVLFLNRNVQEGKPPLGNDYSLQSQ----------PGGGGGGGSFLDQ-TQ 49 Query: 119 MSFNHGVGTXXXXNLRKRGRE 57 M FN G G RKRGRE Sbjct: 50 MLFNPGAGVNS----RKRGRE 66