BLASTX nr result

ID: Catharanthus22_contig00000867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00000867
         (1629 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004245850.1| PREDICTED: uncharacterized protein LOC101255...    67   2e-08
ref|XP_006358616.1| PREDICTED: mediator of RNA polymerase II tra...    65   8e-08

>ref|XP_004245850.1| PREDICTED: uncharacterized protein LOC101255818 [Solanum
           lycopersicum]
          Length = 348

 Score = 67.4 bits (163), Expect = 2e-08
 Identities = 44/81 (54%), Positives = 48/81 (59%)
 Frame = -2

Query: 299 MAVQAQYPSNVLLLNRTVQEGKSPLGNDFLLKPQIXXXXXXXXXXXXXXXXGTFLDHTTN 120
           MAVQAQYPSNVL LNR VQEGK+PLGND+ L+ Q                 G+FLD  T 
Sbjct: 1   MAVQAQYPSNVLFLNRNVQEGKTPLGNDYSLQSQ------------PGGGAGSFLDQ-TQ 47

Query: 119 MSFNHGVGTXXXXNLRKRGRE 57
           M FN GVG       RKRGRE
Sbjct: 48  MLFNPGVGANS----RKRGRE 64


>ref|XP_006358616.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15-like [Solanum tuberosum]
          Length = 346

 Score = 65.1 bits (157), Expect = 8e-08
 Identities = 43/81 (53%), Positives = 46/81 (56%)
 Frame = -2

Query: 299 MAVQAQYPSNVLLLNRTVQEGKSPLGNDFLLKPQIXXXXXXXXXXXXXXXXGTFLDHTTN 120
           MAVQAQYPSNVL LNR VQEGK PLGND+ L+ Q                 G+FLD  T 
Sbjct: 1   MAVQAQYPSNVLFLNRNVQEGKPPLGNDYSLQSQ----------PGGGGGGGSFLDQ-TQ 49

Query: 119 MSFNHGVGTXXXXNLRKRGRE 57
           M FN G G       RKRGRE
Sbjct: 50  MLFNPGAGVNS----RKRGRE 66


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