BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00000734
         (2197 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-...   635   e-179
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   631   e-178
gb|EOY10268.1| Sigma factor A isoform 1 [Theobroma cacao]             630   e-177
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-...   629   e-177
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr...   628   e-177
dbj|BAA88921.1| sigma factor [Nicotiana tabacum]                      625   e-176
gb|EMJ20222.1| hypothetical protein PRUPE_ppa004393mg [Prunus pe...   615   e-173
dbj|BAA88922.1| sigma factor [Nicotiana tabacum]                      615   e-173
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei...   613   e-173
ref|XP_006347341.1| PREDICTED: RNA polymerase sigma factor sigA-...   608   e-171
ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-...   607   e-171
ref|XP_004241445.1| PREDICTED: RNA polymerase sigma factor sigA-...   603   e-169
ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik...   599   e-168
ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-...   598   e-168
emb|CBI26421.3| unnamed protein product [Vitis vinifera]              596   e-167
ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-...   595   e-167
ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Popu...   592   e-166
gb|ESW03465.1| hypothetical protein PHAVU_011G016400g [Phaseolus...   586   e-164
ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-...   585   e-164
ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutr...   582   e-163

>ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-like [Solanum
            lycopersicum]
          Length = 509

 Score =  635 bits (1639), Expect = e-179
 Identities = 341/508 (67%), Positives = 388/508 (76%), Gaps = 4/508 (0%)
 Frame = -2

Query: 1827 IMATSAVIXXXXXXXXXXXSFYYSEISEKLIYSTDHPPAHHQIASTKNVITSKKSFNLSP 1648
            +MAT+AVI           SFYYS+++EKL  S+DH    HQ+ + KNVI++KKS + SP
Sbjct: 1    MMATTAVIGLSAGKRLLSSSFYYSDLNEKLSCSSDHSLPCHQVPTVKNVISAKKSSDYSP 60

Query: 1647 XXXXXXXXXXXXXLKEHVDNASDPSSLQPRLPSSNHL-HEGIFDPDYPVEALLLLQKSML 1471
                         LKEHVD ASDPS +Q        L +E   + D  VE LLLLQKSML
Sbjct: 61   SCVSSRKLQSVKALKEHVDIASDPSDVQSWFERFEQLQNESDDEEDDSVEVLLLLQKSML 120

Query: 1470 EKQWNLSAENEIAP---RGKTCKKMQVTCSGTSARQRRMDSRQQLLSRKNCSRQLSVRRK 1300
            EKQWNLSAE  +     R K CKKM + CSGTSAR+RRMDSRQ++L++K+ +  +S  + 
Sbjct: 121  EKQWNLSAEETLTASTQRKKNCKKMHIACSGTSARRRRMDSRQRVLAQKSSATPISATKP 180

Query: 1299 LRSIVSPELLQNRLKGYVKGVISEELLSHTEVVQLSTKIKXXXXXXXXXXXXXXXXGCEP 1120
            LRSI+ P+LLQNRLKGYVKG++SEELL+HTEV+QLS KIK                GCEP
Sbjct: 181  LRSILGPDLLQNRLKGYVKGIVSEELLTHTEVLQLSKKIKVGLHVEEQKSRLKERLGCEP 240

Query: 1119 SDEQLAASLQITRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXXX 940
            SD+QLA SL+++R +LQS LIECSLARE+L+MSNVRLVMSIAQRYDNMGAEMAD      
Sbjct: 241  SDDQLAVSLKMSRTDLQSTLIECSLARERLSMSNVRLVMSIAQRYDNMGAEMADLVQGGL 300

Query: 939  XXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIR 760
                  IEKFD SKG+KISTYVYWWIRQGVSR LVENSRTLRLPTHLHERL LIRNAK+R
Sbjct: 301  IGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRTLVENSRTLRLPTHLHERLGLIRNAKMR 360

Query: 759  LEERGITPSIDRIAECLNMSQKKVRNATEAVSKVISLDREAFPSLNGLPGETLHSYIADN 580
            LEE+GI PS++ IA  LNMSQKKVRNATEA SKV SLDRE FPSLNGLPG TLHSYIADN
Sbjct: 361  LEEKGINPSVNNIAASLNMSQKKVRNATEASSKVYSLDREVFPSLNGLPGTTLHSYIADN 420

Query: 579  RFENNPWHGVDEFALKDEVNKLIDSTLRERERDIIRLYYGLGKECLTWEDISKRIGLSRE 400
              ENNPWHGVD +ALKDEVN LI STLRERER+IIRLYYGL  ECLTWEDISKRIGLSRE
Sbjct: 421  HLENNPWHGVDVWALKDEVNNLISSTLREREREIIRLYYGLDSECLTWEDISKRIGLSRE 480

Query: 399  RVRQVGLVALEKLKHAARKRRLEAMLVK 316
            RVRQVGLVALEKLKHAARKRRL+AML+K
Sbjct: 481  RVRQVGLVALEKLKHAARKRRLDAMLIK 508


>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 508

 Score =  631 bits (1628), Expect = e-178
 Identities = 344/508 (67%), Positives = 390/508 (76%), Gaps = 4/508 (0%)
 Frame = -2

Query: 1824 MATSAVIXXXXXXXXXXXSFYYSEISEKLIYSTDHPPAHHQIASTKNVITSKKSFNLSPX 1645
            MAT+AVI           +FYYS+++EKL  + +H   H+QI STK +I +KKS N  P 
Sbjct: 1    MATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSSNYGPS 60

Query: 1644 XXXXXXXXXXXXL-KEHVDNASDPSSLQPRLPSSNHLHEGIFDPDYPVEALLLLQKSMLE 1468
                          KEHVD AS PS+   +  + N + E   D DY VEALLLLQKSMLE
Sbjct: 61   FPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSMLE 120

Query: 1467 KQWNLSAE---NEIAPRGKTCKKMQVTCSGTSARQRRMDSRQQLLSRKNCSRQLSVRRKL 1297
            KQWNLS E   +  +P  K+ KK+ VTCSG SARQRR++ R++ LS+   + Q +V ++L
Sbjct: 121  KQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQL 180

Query: 1296 RSIVSPELLQNRLKGYVKGVISEELLSHTEVVQLSTKIKXXXXXXXXXXXXXXXXGCEPS 1117
            +S VSPELLQNRLKGYVKGV+SEELLSH EVV+LS  IK                GC+PS
Sbjct: 181  KSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDPS 240

Query: 1116 DEQLAASLQITRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXXXX 937
            DEQ+A SL+I+RAELQSK I CSLAREKLAMSNVRLVMSIAQRYDNMGAEMAD       
Sbjct: 241  DEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI 300

Query: 936  XXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRL 757
                 IEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLP HLHERL LIRNAKIRL
Sbjct: 301  GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIRL 360

Query: 756  EERGITPSIDRIAECLNMSQKKVRNATEAVSKVISLDREAFPSLNGLPGETLHSYIADNR 577
            EE+G+TPSIDRIAE LN+SQKKVRNATEAVSKV SLDREAFPSLNGLPGET HSYIADN 
Sbjct: 361  EEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADNC 420

Query: 576  FENNPWHGVDEFALKDEVNKLIDSTLRERERDIIRLYYGLGKECLTWEDISKRIGLSRER 397
             ENNPWHGVD++ALKDEVNKLI+ TL+ERE++IIRLYYGL  E LTWEDISKRIGLSRER
Sbjct: 421  LENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSRER 480

Query: 396  VRQVGLVALEKLKHAARKRRLEAMLVKH 313
            VRQVGLVALEKLKHAARK++LEAMLVKH
Sbjct: 481  VRQVGLVALEKLKHAARKKKLEAMLVKH 508


>gb|EOY10268.1| Sigma factor A isoform 1 [Theobroma cacao]
          Length = 508

 Score =  630 bits (1624), Expect = e-177
 Identities = 345/509 (67%), Positives = 392/509 (77%), Gaps = 4/509 (0%)
 Frame = -2

Query: 1827 IMATSAVIXXXXXXXXXXXSFYYSEISEKLIYSTDHPPAHHQIASTKNVITSKKSFNLSP 1648
            +MAT+AVI           SF YS+I EKL Y+ D+  +HHQ +STK++I +KKS N S 
Sbjct: 1    MMATAAVIGLTTGKRLLSSSFSYSDIIEKLSYANDYGSSHHQTSSTKSLIVAKKSSNCSQ 60

Query: 1647 XXXXXXXXXXXXXL-KEHVDNASDPSSLQPRLPSSNHLHEGIFDPDYPVEALLLLQKSML 1471
                           KEHVD+AS  S+ +P    SN L    +D DY VEALLLLQKSML
Sbjct: 61   SLPSSNRRAQSIKALKEHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVEALLLLQKSML 120

Query: 1470 EKQWNLSAENEI---APRGKTCKKMQVTCSGTSARQRRMDSRQQLLSRKNCSRQLSVRRK 1300
            EKQW LS E  +   +P  K  KK+ VTCSG SARQRR ++++++L +     Q + ++ 
Sbjct: 121  EKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQPNAKQ- 179

Query: 1299 LRSIVSPELLQNRLKGYVKGVISEELLSHTEVVQLSTKIKXXXXXXXXXXXXXXXXGCEP 1120
            LRS++SPELLQ+RLKGYVKGV+S+ELLSH EVV+LS KIK                GCEP
Sbjct: 180  LRSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKERLGCEP 239

Query: 1119 SDEQLAASLQITRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXXX 940
            SDEQLA SL+I+RAEL+SKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEM+D      
Sbjct: 240  SDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGL 299

Query: 939  XXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIR 760
                  IEKFDSSKG+KISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL LIRNAKIR
Sbjct: 300  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIR 359

Query: 759  LEERGITPSIDRIAECLNMSQKKVRNATEAVSKVISLDREAFPSLNGLPGETLHSYIADN 580
            LEE+GITP+IDRIAE LNMSQKKVRNATEAVSKV SLDR+AFPSLNGLPGET HSYIADN
Sbjct: 360  LEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADN 419

Query: 579  RFENNPWHGVDEFALKDEVNKLIDSTLRERERDIIRLYYGLGKECLTWEDISKRIGLSRE 400
              EN PWHGVDE+ALKDEVN+LI  TL ERER+IIRLYYGL KE LTWEDISKRIGLSRE
Sbjct: 420  HVENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKRIGLSRE 479

Query: 399  RVRQVGLVALEKLKHAARKRRLEAMLVKH 313
            RVRQVGLVALEKLKHAARK+++EAMLVKH
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
            sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X2 [Citrus
            sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X3 [Citrus
            sinensis]
          Length = 508

 Score =  629 bits (1623), Expect = e-177
 Identities = 342/509 (67%), Positives = 389/509 (76%), Gaps = 4/509 (0%)
 Frame = -2

Query: 1827 IMATSAVIXXXXXXXXXXXSFYYSEISEKLIYSTDHPPAHHQIASTKNVITSKKSFNLSP 1648
            +MAT+AVI           SFYYS+ISEK  Y  D   A+ Q+ STKNV+ +KKS N +P
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP 60

Query: 1647 XXXXXXXXXXXXXL-KEHVDNASDPSSLQPRLPSSNHLHEGIFDPDYPVEALLLLQKSML 1471
                           KEHVD  +  S+ +P     N + E   + DY VEALLLLQKSML
Sbjct: 61   SFPSSNRQTQPIKALKEHVDT-NFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSML 119

Query: 1470 EKQWNLSAENEI---APRGKTCKKMQVTCSGTSARQRRMDSRQQLLSRKNCSRQLSVRRK 1300
            EKQWNLS E  +   +P  KT KK+ VTCSG SARQRR++S++++LS+     Q +  ++
Sbjct: 120  EKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVPQQNGSKQ 179

Query: 1299 LRSIVSPELLQNRLKGYVKGVISEELLSHTEVVQLSTKIKXXXXXXXXXXXXXXXXGCEP 1120
            LRS++SPEL+QN LKGYVKGV+SEELL+H EVV+LS KIK                GCEP
Sbjct: 180  LRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 239

Query: 1119 SDEQLAASLQITRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXXX 940
            S EQLAASL+I+R ELQS L+ECSLAREKL MSNVRLVMSIAQRYDNMGA+MAD      
Sbjct: 240  SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGL 299

Query: 939  XXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIR 760
                  IEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERL LIRNAK+R
Sbjct: 300  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 359

Query: 759  LEERGITPSIDRIAECLNMSQKKVRNATEAVSKVISLDREAFPSLNGLPGETLHSYIADN 580
            LEE+G+TPS+DRIAE LNMSQKKVRNATEA+ KV SLDREAFPSLNGLPGET HSYIADN
Sbjct: 360  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 419

Query: 579  RFENNPWHGVDEFALKDEVNKLIDSTLRERERDIIRLYYGLGKECLTWEDISKRIGLSRE 400
            R ENNPWHGVD++ALKDEVNKLI  TL ERER+IIRLYYGL KECLTWEDISKRIGLSRE
Sbjct: 420  RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 479

Query: 399  RVRQVGLVALEKLKHAARKRRLEAMLVKH 313
            RVRQVGLVALEKLKHAARK+++EAMLVKH
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
            gi|557539599|gb|ESR50643.1| hypothetical protein
            CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score =  628 bits (1620), Expect = e-177
 Identities = 341/509 (66%), Positives = 389/509 (76%), Gaps = 4/509 (0%)
 Frame = -2

Query: 1827 IMATSAVIXXXXXXXXXXXSFYYSEISEKLIYSTDHPPAHHQIASTKNVITSKKSFNLSP 1648
            +MAT+AVI           SFYYS+ISEK  Y  D   A+ Q+ STKNV+ +KKS N +P
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP 60

Query: 1647 XXXXXXXXXXXXXL-KEHVDNASDPSSLQPRLPSSNHLHEGIFDPDYPVEALLLLQKSML 1471
                           KEHVD  +  S+ +P     N + E   + DY VEALLLLQKSML
Sbjct: 61   SFPSSNRQTQPIKALKEHVDT-NFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSML 119

Query: 1470 EKQWNLSAENEI---APRGKTCKKMQVTCSGTSARQRRMDSRQQLLSRKNCSRQLSVRRK 1300
            EKQWNLS E  +   +P  KT KK+ VTCSG SARQRR++S++++LS+     Q +  ++
Sbjct: 120  EKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVLQQNGSKQ 179

Query: 1299 LRSIVSPELLQNRLKGYVKGVISEELLSHTEVVQLSTKIKXXXXXXXXXXXXXXXXGCEP 1120
            LRS++SPEL+QN LKGYVKGV+SEELL+H EVV+LS KIK                GCEP
Sbjct: 180  LRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 239

Query: 1119 SDEQLAASLQITRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXXX 940
            S EQLAASL+I+R ELQS L+ECSLAREKL MSNVRLVMSIAQRYDNMGA+MAD      
Sbjct: 240  SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLIQGGL 299

Query: 939  XXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIR 760
                  IEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERL LIRNAK+R
Sbjct: 300  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 359

Query: 759  LEERGITPSIDRIAECLNMSQKKVRNATEAVSKVISLDREAFPSLNGLPGETLHSYIADN 580
            LEE+G+TP++DRIAE LNMSQKKVRNATEA+ KV SLDREAFPSLNGLPGET HSYIADN
Sbjct: 360  LEEKGVTPAVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 419

Query: 579  RFENNPWHGVDEFALKDEVNKLIDSTLRERERDIIRLYYGLGKECLTWEDISKRIGLSRE 400
            R ENNPWHGVD++ALKDEVNKLI  TL ERER+IIRLYYGL KECLTWEDISKRIGLSRE
Sbjct: 420  RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 479

Query: 399  RVRQVGLVALEKLKHAARKRRLEAMLVKH 313
            RVRQVGLVALEKLKHAARK+++EAMLVKH
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
          Length = 508

 Score =  625 bits (1611), Expect = e-176
 Identities = 336/507 (66%), Positives = 381/507 (75%), Gaps = 3/507 (0%)
 Frame = -2

Query: 1827 IMATSAVIXXXXXXXXXXXSFYYSEISEKLIYSTDHPPAHHQIASTKNVITSKKSFNLSP 1648
            +M+T+AVI           SFYYS+++EKL  ++DH    H + S KNVIT+KKS + SP
Sbjct: 1    MMSTAAVIGLSAGKRLLSSSFYYSDLNEKLTCTSDHSLPCHHVPSIKNVITAKKSSDYSP 60

Query: 1647 XXXXXXXXXXXXXLKEHVDNASDPSSLQPRLPSSNHLHEGIFDPDYPVEALLLLQKSMLE 1468
                         LKEHVD  +DPS +         L     D D  VE LLLLQKSMLE
Sbjct: 61   SCVSSRKSQSAKSLKEHVDITADPSDVPSWFEMYEQLQNESDDEDESVEVLLLLQKSMLE 120

Query: 1467 KQWNLSAENEIAP---RGKTCKKMQVTCSGTSARQRRMDSRQQLLSRKNCSRQLSVRRKL 1297
            KQWNLS E  +       K  KKM +TCSGTSAR+RRMDSRQ++L R + +   S  + L
Sbjct: 121  KQWNLSLEQTLTASPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRHSSATPTSAAKPL 180

Query: 1296 RSIVSPELLQNRLKGYVKGVISEELLSHTEVVQLSTKIKXXXXXXXXXXXXXXXXGCEPS 1117
            RSI+ PELLQNRLKGYVKGV+SEELL+H EV+QLS KI+                GCEPS
Sbjct: 181  RSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLGCEPS 240

Query: 1116 DEQLAASLQITRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXXXX 937
            D+QLA SL+++R +LQS LIECSLARE+LAMSNVRLVMSIAQRYDN+GAEMAD       
Sbjct: 241  DDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLVQGGLI 300

Query: 936  XXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRL 757
                 IEKFD SKG+KISTYVYWWIRQGVSRALVENSRTLRLPT+LHERLSLIRNAK RL
Sbjct: 301  GLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNAKARL 360

Query: 756  EERGITPSIDRIAECLNMSQKKVRNATEAVSKVISLDREAFPSLNGLPGETLHSYIADNR 577
            EE+GITPS++ IA  LNMSQKKVRNATEA SK+ SLDREAFPSLNGLPGETLHSYIADN 
Sbjct: 361  EEKGITPSVNNIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHSYIADNH 420

Query: 576  FENNPWHGVDEFALKDEVNKLIDSTLRERERDIIRLYYGLGKECLTWEDISKRIGLSRER 397
             ENNPWHGVD +ALKDEVN LI STLR+RER+IIRLYYGL  ECLTWEDISKRIGLSRER
Sbjct: 421  LENNPWHGVDVWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWEDISKRIGLSRER 480

Query: 396  VRQVGLVALEKLKHAARKRRLEAMLVK 316
            VRQVGLVALEKLKHAARKR+L+AML+K
Sbjct: 481  VRQVGLVALEKLKHAARKRQLDAMLIK 507


>gb|EMJ20222.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
          Length = 512

 Score =  615 bits (1586), Expect = e-173
 Identities = 342/512 (66%), Positives = 384/512 (75%), Gaps = 7/512 (1%)
 Frame = -2

Query: 1827 IMATSAVIXXXXXXXXXXXSFYYSEISEKLIYSTDHPP-AHHQIASTKNVITSKKSFNLS 1651
            +MAT+AVI           SFYYS+I+EKL +  DH    H   +STKNV+T++K  N S
Sbjct: 1    MMATAAVIGLSTGKRLLNSSFYYSDITEKLFHLNDHHGFLHCHFSSTKNVVTARKPSNCS 60

Query: 1650 PXXXXXXXXXXXXXL-KEHVDNASDPSSL-QPRLPSSNHLHEGIFDPDYPVEALLLLQKS 1477
                            KEHV  AS PSS  Q      N L E   D +Y VEALLLLQKS
Sbjct: 61   SRFPSSNRPQQSIRALKEHVQTASAPSSATQQWFQELNDLEEESSDLEYSVEALLLLQKS 120

Query: 1476 MLEKQWNLSAENEI---APRGKTCKKMQVTCSGTSARQRRMDS-RQQLLSRKNCSRQLSV 1309
            MLEKQWNLS E ++   +    T KK+ VTCSG SARQRRM S +++  ++  C    S 
Sbjct: 121  MLEKQWNLSFEKKVLRDSTSKTTDKKIPVTCSGVSARQRRMTSTKRKTFNKSTCVMHPST 180

Query: 1308 RRKLRSIVSPELLQNRLKGYVKGVISEELLSHTEVVQLSTKIKXXXXXXXXXXXXXXXXG 1129
             + LR+IVSPELLQN +KGYVKGV+SE+LL+HTEVV+LS KIK                G
Sbjct: 181  NKPLRAIVSPELLQNHVKGYVKGVLSEDLLTHTEVVRLSKKIKVGLSVEEHKSRLKERLG 240

Query: 1128 CEPSDEQLAASLQITRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXX 949
            CEPSDEQLA SL+I+RA+LQSKLIEC LAREKLAMSNVRLVMSIAQRYDNMGAEMAD   
Sbjct: 241  CEPSDEQLATSLRISRAQLQSKLIECKLAREKLAMSNVRLVMSIAQRYDNMGAEMADLIQ 300

Query: 948  XXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNA 769
                     IEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL LIRNA
Sbjct: 301  GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA 360

Query: 768  KIRLEERGITPSIDRIAECLNMSQKKVRNATEAVSKVISLDREAFPSLNGLPGETLHSYI 589
            KIRLEE+GITPSIDRIAE LNMS+KKVRNATEA+SKV SLDR+AFPSLNGLPGET HSYI
Sbjct: 361  KIRLEEKGITPSIDRIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSYI 420

Query: 588  ADNRFENNPWHGVDEFALKDEVNKLIDSTLRERERDIIRLYYGLGKECLTWEDISKRIGL 409
            ADNR EN PWHGVD +ALK+EV+KLI+  L ERE++II+LYYGL  ECLTWEDISKRIGL
Sbjct: 421  ADNRLENIPWHGVDAWALKEEVSKLINMMLGEREKEIIQLYYGLENECLTWEDISKRIGL 480

Query: 408  SRERVRQVGLVALEKLKHAARKRRLEAMLVKH 313
            SRERVRQVGLVALEKLKHAARKR +EAML+KH
Sbjct: 481  SRERVRQVGLVALEKLKHAARKREMEAMLLKH 512


>dbj|BAA88922.1| sigma factor [Nicotiana tabacum]
          Length = 502

 Score =  615 bits (1585), Expect = e-173
 Identities = 331/486 (68%), Positives = 368/486 (75%), Gaps = 1/486 (0%)
 Frame = -2

Query: 1767 FYYSEISEKLIYSTDHPPAHHQIASTKNVITSKKSFNLSPXXXXXXXXXXXXXLKEHVDN 1588
            FYYS ++EK   S    P HH   S KNVI +K S N SP             LKEHVD 
Sbjct: 18   FYYSVLTEKFCVSDHALPCHH-FPSPKNVINAKNSSNYSPSYVSNRKKQSVKALKEHVDI 76

Query: 1587 ASD-PSSLQPRLPSSNHLHEGIFDPDYPVEALLLLQKSMLEKQWNLSAENEIAPRGKTCK 1411
            AS+  S  +P +     L  G    +  VE LLLLQKSMLEKQWNLSAE  +       K
Sbjct: 77   ASNRDSDTEPWVQMFKQLQNGSCSEEDSVEVLLLLQKSMLEKQWNLSAEKAMTNENNCKK 136

Query: 1410 KMQVTCSGTSARQRRMDSRQQLLSRKNCSRQLSVRRKLRSIVSPELLQNRLKGYVKGVIS 1231
            KMQ+TCSGTSAR+RRMD+R++ L  KN +   S  ++LRS++ PELLQNR KGY+ GV+ 
Sbjct: 137  KMQITCSGTSARRRRMDTRKRDLLPKNSATSDSSSKRLRSVIGPELLQNRSKGYINGVVG 196

Query: 1230 EELLSHTEVVQLSTKIKXXXXXXXXXXXXXXXXGCEPSDEQLAASLQITRAELQSKLIEC 1051
            +ELL+HTEVVQLS KIK                GCEPSD+QLA SL+I+RA+L+S LIEC
Sbjct: 197  QELLTHTEVVQLSKKIKFGLYLEEQKSRLKERLGCEPSDDQLAISLKISRADLRSTLIEC 256

Query: 1050 SLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXXXXXXXXXIEKFDSSKGFKISTYVY 871
            SLAREKLAMSNVRLVMSIAQRYD  G EMAD            IEKFD S+GFKISTYVY
Sbjct: 257  SLAREKLAMSNVRLVMSIAQRYDTNGTEMADLIQGGLIGLLRGIEKFDHSRGFKISTYVY 316

Query: 870  WWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLEERGITPSIDRIAECLNMSQKK 691
            WWIRQGVSRALVENSRTLRLP HLHERLSLIRNAKI+L+E GITPSI++IAECLNMSQKK
Sbjct: 317  WWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKENGITPSIEKIAECLNMSQKK 376

Query: 690  VRNATEAVSKVISLDREAFPSLNGLPGETLHSYIADNRFENNPWHGVDEFALKDEVNKLI 511
            VRNATEA SKV SLDREAFPSLNGLPGETLHSYIADNR EN PWHGVDE+ LKDEVN LI
Sbjct: 377  VRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRLENIPWHGVDEWMLKDEVNNLI 436

Query: 510  DSTLRERERDIIRLYYGLGKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRRLE 331
             STLRERER+I+RLYYGL  ECLTWEDIS+RIGLSRERVRQVGLVALEKLKHAARKRRL+
Sbjct: 437  SSTLREREREIVRLYYGLDNECLTWEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLD 496

Query: 330  AMLVKH 313
            AMLVKH
Sbjct: 497  AMLVKH 502


>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
            gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
            1 family protein [Populus trichocarpa]
          Length = 509

 Score =  613 bits (1582), Expect = e-173
 Identities = 336/509 (66%), Positives = 386/509 (75%), Gaps = 4/509 (0%)
 Frame = -2

Query: 1827 IMATSAVIXXXXXXXXXXXSFYYSEISEKLIYSTDHPPAHHQIASTKNVITSKKSFNLSP 1648
            +MAT+AVI           SFYYS+++EKL    DH   ++  A+TKNVI +KKS N  P
Sbjct: 1    MMATAAVIGLSSGKRLLSSSFYYSDLTEKLSNVNDHGITYYPTATTKNVIVAKKSSNYGP 60

Query: 1647 XXXXXXXXXXXXXL-KEHVDNASDPSSLQPRLPSSNHLHEGIFDPDYPVEALLLLQKSML 1471
                           KEHVD AS  S++     + +   E     DY VEALLLLQKSML
Sbjct: 61   SFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSML 120

Query: 1470 EKQWNLSAE---NEIAPRGKTCKKMQVTCSGTSARQRRMDSRQQLLSRKNCSRQLSVRRK 1300
            EKQWNLS E   +  +   K  KK+ VTCSG SARQRR+++R++  ++     Q S  + 
Sbjct: 121  EKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKF 180

Query: 1299 LRSIVSPELLQNRLKGYVKGVISEELLSHTEVVQLSTKIKXXXXXXXXXXXXXXXXGCEP 1120
            LRS+ SP+LLQNRLKGYVKGV+S+E+L HTEVV+LS  I+                GCEP
Sbjct: 181  LRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLGCEP 240

Query: 1119 SDEQLAASLQITRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXXX 940
            SDEQ+A SL+I+RA+LQSKLI+CSLAREKLAMSNVRLVMSIAQ+YDNMGAEMAD      
Sbjct: 241  SDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQGGL 300

Query: 939  XXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIR 760
                  IEKFDSSKGFKISTYVYWWIRQGVSRALV+NSRTLRLP HLHERL LIRNAKIR
Sbjct: 301  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKIR 360

Query: 759  LEERGITPSIDRIAECLNMSQKKVRNATEAVSKVISLDREAFPSLNGLPGETLHSYIADN 580
            LEE+G+TPSIDRIAE LNMSQ+KVRNATEA+SKV SLDREAFPSLNGLPGET HSYIADN
Sbjct: 361  LEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 420

Query: 579  RFENNPWHGVDEFALKDEVNKLIDSTLRERERDIIRLYYGLGKECLTWEDISKRIGLSRE 400
            R ENNPWHGVDE+ALK+EVNKLIDSTL+ERE++IIRLY+GL +ECLTWEDISKR+GLSRE
Sbjct: 421  RPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMGLSRE 480

Query: 399  RVRQVGLVALEKLKHAARKRRLEAMLVKH 313
            RVRQVGLVALEKLKHAARKR  EAMLVKH
Sbjct: 481  RVRQVGLVALEKLKHAARKRNTEAMLVKH 509


>ref|XP_006347341.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Solanum
            tuberosum] gi|565361192|ref|XP_006347342.1| PREDICTED:
            RNA polymerase sigma factor sigA-like isoform X2 [Solanum
            tuberosum]
          Length = 505

 Score =  608 bits (1567), Expect = e-171
 Identities = 329/508 (64%), Positives = 382/508 (75%), Gaps = 4/508 (0%)
 Frame = -2

Query: 1824 MATSAVIXXXXXXXXXXXSFYYSEISEKLIYSTDHPPAHHQIASTKNVITSKKSFNLSPX 1645
            MA +AVI           SFYYS+++EKL  S DH    +    T NVI +KKS N S  
Sbjct: 1    MAIAAVIGLYAGNRILSSSFYYSDLTEKLACSGDHALICNP---TWNVINAKKSSNYSTG 57

Query: 1644 XXXXXXXXXXXXLKEHVDNASDPSSLQPRLPSSNHLHEGIFDPDYPVEALLLLQKSMLEK 1465
                        +KEHV+ AS+ S ++P +     L    F  +  VE LLLLQKSMLEK
Sbjct: 58   YVSNRKKQSVKAVKEHVNIASNHSDVEPMVEMFKKLQNESFSEEDSVEVLLLLQKSMLEK 117

Query: 1464 QWNLSAENEIA---PRGKTCKK-MQVTCSGTSARQRRMDSRQQLLSRKNCSRQLSVRRKL 1297
            QWNLSAE  +A   P  K CKK MQ+TCSGTSAR+RRMD+R+++   K  +   S  ++L
Sbjct: 118  QWNLSAEKTLAAFPPNEKNCKKKMQITCSGTSARRRRMDTRKRVQIPKTSAAANSASKRL 177

Query: 1296 RSIVSPELLQNRLKGYVKGVISEELLSHTEVVQLSTKIKXXXXXXXXXXXXXXXXGCEPS 1117
            RS+V PEL QNRL+GY+KGV+++ELL+H EVVQLS KIK                GCEPS
Sbjct: 178  RSVVGPELQQNRLRGYMKGVVNQELLTHKEVVQLSKKIKFGLYLEEQKASLKERLGCEPS 237

Query: 1116 DEQLAASLQITRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXXXX 937
            D+QLA SL+++ A+L+S L+ECSLAREKLAMSNVRLVMSIAQRYD+MG EMAD       
Sbjct: 238  DDQLAVSLKMSLADLRSTLMECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADLIQGGLI 297

Query: 936  XXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRL 757
                 IEKFD S+GFKISTYVYWWIRQGVSRALV+NSRTLRLP HLHERLSLIRNAK++L
Sbjct: 298  GLLRGIEKFDHSRGFKISTYVYWWIRQGVSRALVDNSRTLRLPIHLHERLSLIRNAKVKL 357

Query: 756  EERGITPSIDRIAECLNMSQKKVRNATEAVSKVISLDREAFPSLNGLPGETLHSYIADNR 577
            ++ GITPSI++IAECLNMSQKKVRNATEA SKV SLDREA+PSLNGLPG TLHSYIADNR
Sbjct: 358  KDNGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAYPSLNGLPGATLHSYIADNR 417

Query: 576  FENNPWHGVDEFALKDEVNKLIDSTLRERERDIIRLYYGLGKECLTWEDISKRIGLSRER 397
             ENNPWHGVD +ALKDEVN LI STLRERERDI+RLYYGL  ECLTWEDIS+RIGLSRER
Sbjct: 418  LENNPWHGVDGWALKDEVNNLISSTLRERERDIVRLYYGLDNECLTWEDISRRIGLSRER 477

Query: 396  VRQVGLVALEKLKHAARKRRLEAMLVKH 313
            VRQVGLVALEKLKHAARK++L+AMLVKH
Sbjct: 478  VRQVGLVALEKLKHAARKKQLDAMLVKH 505


>ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-like [Glycine max]
          Length = 503

 Score =  607 bits (1565), Expect = e-171
 Identities = 335/511 (65%), Positives = 387/511 (75%), Gaps = 7/511 (1%)
 Frame = -2

Query: 1824 MATSAVIXXXXXXXXXXXSFYYSEISEKLIYSTDHPPAHHQIASTKNVITSKKSFNLSPX 1645
            MAT+AVI           S++YS+I EKL Y +D    H+QI  TK++I +KKS N +P 
Sbjct: 1    MATAAVIGLSGGKRLLSSSYHYSDIIEKLSYGSDFGSTHYQIVPTKSLIVAKKSSNYTPT 60

Query: 1644 XXXXXXXXXXXXL-KEHVDNASDPSSLQPRLPS--SNHLHEGIFDPDYPVEALLLLQKSM 1474
                          KEHVD+A  P+   P   S  SN L     +  Y VEALLLLQKSM
Sbjct: 61   FPASNQQNQSIKALKEHVDDA--PTIADPWFQSYNSNDLEVESSEMGYSVEALLLLQKSM 118

Query: 1473 LEKQWNLSAENEI----APRGKTCKKMQVTCSGTSARQRRMDSRQQLLSRKNCSRQLSVR 1306
            LEKQWNLS E E+    + +GK C+K+ VTCSG SARQRRM+++++  + K C       
Sbjct: 119  LEKQWNLSFEREVLTENSSKGKKCRKVAVTCSGVSARQRRMNTKRKT-AIKTCGAM---- 173

Query: 1305 RKLRSIVSPELLQNRLKGYVKGVISEELLSHTEVVQLSTKIKXXXXXXXXXXXXXXXXGC 1126
             +L+S +SPELLQ+RLKGYVKG++SEELLSH EVV LS KIK                GC
Sbjct: 174  -QLKSKISPELLQHRLKGYVKGLVSEELLSHAEVVNLSEKIKVGLSLEEHKSRLKEKLGC 232

Query: 1125 EPSDEQLAASLQITRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXX 946
            EPSD+Q+A SL+I+R EL++++IECSLAREKLAMSNVRLVMSIAQ+YDN+GAEM D    
Sbjct: 233  EPSDDQMATSLKISRTELRARMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMGDLVQG 292

Query: 945  XXXXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAK 766
                    IEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERLSLIRNAK
Sbjct: 293  GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHERLSLIRNAK 352

Query: 765  IRLEERGITPSIDRIAECLNMSQKKVRNATEAVSKVISLDREAFPSLNGLPGETLHSYIA 586
             RLEERGITP+IDRIA+ LNMSQKKVRNATEA+SK+ISLDREAFPSLNGL GET HSYIA
Sbjct: 353  FRLEERGITPTIDRIAKYLNMSQKKVRNATEAISKIISLDREAFPSLNGLQGETHHSYIA 412

Query: 585  DNRFENNPWHGVDEFALKDEVNKLIDSTLRERERDIIRLYYGLGKECLTWEDISKRIGLS 406
            DNR EN PW+GVDE+ALKDEVN+LI+ TL ERER+IIRLYYGL KECLTWEDISKRIGLS
Sbjct: 413  DNRVENIPWNGVDEWALKDEVNRLINVTLVEREREIIRLYYGLEKECLTWEDISKRIGLS 472

Query: 405  RERVRQVGLVALEKLKHAARKRRLEAMLVKH 313
            RERVRQVGLVALEKLKHAARKR++EAML+KH
Sbjct: 473  RERVRQVGLVALEKLKHAARKRQMEAMLLKH 503


>ref|XP_004241445.1| PREDICTED: RNA polymerase sigma factor sigA-like [Solanum
            lycopersicum]
          Length = 505

 Score =  603 bits (1555), Expect = e-169
 Identities = 327/508 (64%), Positives = 380/508 (74%), Gaps = 4/508 (0%)
 Frame = -2

Query: 1824 MATSAVIXXXXXXXXXXXSFYYSEISEKLIYSTDHPPAHHQIASTKNVITSKKSFNLSPX 1645
            MA +AVI           SFYYS+++EKL  S DH    +    T+NVI +KKS N S  
Sbjct: 1    MAIAAVIGPYAGNRILSSSFYYSDLTEKLACSGDHALICNP---TRNVINAKKSSNYSAG 57

Query: 1644 XXXXXXXXXXXXLKEHVDNASDPSSLQPRLPSSNHLHEGIFDPDYPVEALLLLQKSMLEK 1465
                        +KEHV+ AS+ S ++P +     L       + PVE LLLLQKSMLEK
Sbjct: 58   YVSNRKKQSVKAVKEHVNIASNHSDVEPMVEMLKKLQNESCSKEDPVEVLLLLQKSMLEK 117

Query: 1464 QWNLSAENEIA---PRGKTCKK-MQVTCSGTSARQRRMDSRQQLLSRKNCSRQLSVRRKL 1297
            QWNLSAE  +    P  K CKK MQ+TCSGTSAR+RRMD+R+++   K  +   S  ++L
Sbjct: 118  QWNLSAEKTLEAFPPNEKNCKKKMQITCSGTSARRRRMDTRKRVQIPKASAEANSASKRL 177

Query: 1296 RSIVSPELLQNRLKGYVKGVISEELLSHTEVVQLSTKIKXXXXXXXXXXXXXXXXGCEPS 1117
            RS+V PEL QNRL+GY+ GV+++ELL+H EVVQLS KIK                GCEPS
Sbjct: 178  RSVVGPELQQNRLRGYMNGVVNQELLTHKEVVQLSKKIKFGLYLEEQKASLKERLGCEPS 237

Query: 1116 DEQLAASLQITRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXXXX 937
            D+QLA SL+++ A+L+S L+ECSLAREKLAMSNVRLVMSIAQRYD+MG EMAD       
Sbjct: 238  DDQLAVSLKMSLADLRSTLMECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADLIQGGLI 297

Query: 936  XXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRL 757
                 IEKFD S+GFKISTYVYWWIRQGVSRALV+NSRTLRLP HLHERLSLIRNAK++L
Sbjct: 298  GLLRGIEKFDHSRGFKISTYVYWWIRQGVSRALVDNSRTLRLPIHLHERLSLIRNAKVKL 357

Query: 756  EERGITPSIDRIAECLNMSQKKVRNATEAVSKVISLDREAFPSLNGLPGETLHSYIADNR 577
            ++ GITPSI++IAECLNMSQKKVRNATEA SKV SLDREA+PSLNGLPG TLHSYIADNR
Sbjct: 358  KDSGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAYPSLNGLPGATLHSYIADNR 417

Query: 576  FENNPWHGVDEFALKDEVNKLIDSTLRERERDIIRLYYGLGKECLTWEDISKRIGLSRER 397
             ENNPWHGVD +ALKDEVN LI S LRERERDIIRLYYGL  ECLTWEDIS+RIGLSRER
Sbjct: 418  LENNPWHGVDGWALKDEVNNLISSILRERERDIIRLYYGLDNECLTWEDISRRIGLSRER 477

Query: 396  VRQVGLVALEKLKHAARKRRLEAMLVKH 313
            VRQVGLVALEKLKHAARK++L+AMLVKH
Sbjct: 478  VRQVGLVALEKLKHAARKKQLDAMLVKH 505


>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
            vinifera]
          Length = 497

 Score =  599 bits (1545), Expect = e-168
 Identities = 341/512 (66%), Positives = 384/512 (75%), Gaps = 7/512 (1%)
 Frame = -2

Query: 1827 IMATSAVIXXXXXXXXXXXSFYYSEISEKLI-YSTDHPPAHHQIASTKNVITSKKSFNLS 1651
            +M T+AVI           S +YS+++EKL  Y  D    HH     KN+I++KK  N +
Sbjct: 1    MMGTAAVIGLSAGNRLLASSHHYSDVAEKLSSYVNDVGFPHHPSPPPKNLISAKKPSNYT 60

Query: 1650 PXXXXXXXXXXXXXLKEHVDNASDPSSLQPRLPSSNHLHEGIFDPDYPVEALLLLQKSML 1471
            P              KEHV++AS PS+  P L SS+   E   D +Y VEA LLLQKSML
Sbjct: 61   PSSNRSIQSMKAL--KEHVESASAPSTADPDLSSSSSEVE---DEEYLVEAFLLLQKSML 115

Query: 1470 EKQWNLSAENEIAPR----GKTC--KKMQVTCSGTSARQRRMDSRQQLLSRKNCSRQLSV 1309
            EKQWNLS E E        GK    K+ +VTCSGTSARQRR+  R+++++ K+ SR   V
Sbjct: 116  EKQWNLSFEEEEEEEEEDMGKKARQKRREVTCSGTSARQRRISGRKRVMNEKSKSR---V 172

Query: 1308 RRKLRSIVSPELLQNRLKGYVKGVISEELLSHTEVVQLSTKIKXXXXXXXXXXXXXXXXG 1129
            R  L        ++NRLKGYVKGV+SEELL+H +VV LS KIK                G
Sbjct: 173  RAALG-------VENRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERIG 225

Query: 1128 CEPSDEQLAASLQITRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXX 949
             EP+DEQ+AASL+++RAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMAD   
Sbjct: 226  SEPTDEQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQ 285

Query: 948  XXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNA 769
                     IEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP+HLHERLSLIRNA
Sbjct: 286  GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNA 345

Query: 768  KIRLEERGITPSIDRIAECLNMSQKKVRNATEAVSKVISLDREAFPSLNGLPGETLHSYI 589
            KIRLEE+GITPSIDRIAECLNMSQKKVRNATEA+SKV SLDREAFPSLNGLPGETLHSYI
Sbjct: 346  KIRLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYI 405

Query: 588  ADNRFENNPWHGVDEFALKDEVNKLIDSTLRERERDIIRLYYGLGKECLTWEDISKRIGL 409
            AD R ENNPWHGVDE+ALKDEVNKLI++TL ERERDIIRLYYGL  ECLTWEDISKRIGL
Sbjct: 406  ADVRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRIGL 465

Query: 408  SRERVRQVGLVALEKLKHAARKRRLEAMLVKH 313
            SRERVRQVGLVALEKLK+AARK R+EAMLVK+
Sbjct: 466  SRERVRQVGLVALEKLKNAARKGRMEAMLVKY 497


>ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Glycine
            max] gi|571478813|ref|XP_006587676.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X2 [Glycine
            max]
          Length = 503

 Score =  598 bits (1543), Expect = e-168
 Identities = 328/509 (64%), Positives = 384/509 (75%), Gaps = 5/509 (0%)
 Frame = -2

Query: 1824 MATSAVIXXXXXXXXXXXSFYYSEISEKLIYSTDHPPAHHQIASTKNVITSKKSFNLSPX 1645
            MAT+AVI           S++YS++ EKL Y +D    H+QI  TK++I +KKS N +P 
Sbjct: 1    MATAAVIGLSGGKRLLSSSYHYSDVIEKLSYGSDFGSTHYQIVPTKSLIAAKKSSNYTPT 60

Query: 1644 XXXXXXXXXXXXL-KEHVDNASDPSSLQPRLPSSNHLHEGIFDPDYPVEALLLLQKSMLE 1468
                          KEHVD+A   +    +  +SN L     +  Y VEALLLLQKSMLE
Sbjct: 61   FPASNQQNQSIKALKEHVDDAPTIADSWFQSCNSNDLEVESSEMGYSVEALLLLQKSMLE 120

Query: 1467 KQWNLSAENEI----APRGKTCKKMQVTCSGTSARQRRMDSRQQLLSRKNCSRQLSVRRK 1300
            KQWNLS E E+    + +GK CKK+ VTCSG SARQRRM+++++  + K C        +
Sbjct: 121  KQWNLSFEREVLTEHSSKGKKCKKVAVTCSGVSARQRRMNTKRKT-AIKTCGAM-----Q 174

Query: 1299 LRSIVSPELLQNRLKGYVKGVISEELLSHTEVVQLSTKIKXXXXXXXXXXXXXXXXGCEP 1120
            L+S +SPELLQ+RLKGYVKG++SEELLSH EVV LS +IK                GCEP
Sbjct: 175  LKSKISPELLQHRLKGYVKGIVSEELLSHAEVVNLSERIKVGLSLEEHKSRLKERLGCEP 234

Query: 1119 SDEQLAASLQITRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXXX 940
            SD+Q+A SL+I+R EL++++IEC+LAREKLAMSNVRLVMSIAQ+YDN+GAEM D      
Sbjct: 235  SDDQMAISLKISRTELRARMIECTLAREKLAMSNVRLVMSIAQKYDNLGAEMGDLVQGGL 294

Query: 939  XXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIR 760
                  IEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERLSLIRNAK R
Sbjct: 295  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHERLSLIRNAKFR 354

Query: 759  LEERGITPSIDRIAECLNMSQKKVRNATEAVSKVISLDREAFPSLNGLPGETLHSYIADN 580
            LEERGITP+IDRIA+ LNMSQKKVRNATEA+SK ISLDREAFPSLNG+ GET HSYIAD+
Sbjct: 355  LEERGITPTIDRIAKYLNMSQKKVRNATEAISKTISLDREAFPSLNGIQGETHHSYIADD 414

Query: 579  RFENNPWHGVDEFALKDEVNKLIDSTLRERERDIIRLYYGLGKECLTWEDISKRIGLSRE 400
            R EN PW+GVDE+ALKDEVNKLI+ TL ERER+IIRLYYGL KE LTWEDISKRIGLSRE
Sbjct: 415  RVENIPWNGVDEWALKDEVNKLINVTLVEREREIIRLYYGLDKEGLTWEDISKRIGLSRE 474

Query: 399  RVRQVGLVALEKLKHAARKRRLEAMLVKH 313
            RVRQVGLVALEKLKHAARKR++EAML+KH
Sbjct: 475  RVRQVGLVALEKLKHAARKRQMEAMLLKH 503


>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  596 bits (1537), Expect = e-167
 Identities = 338/508 (66%), Positives = 382/508 (75%), Gaps = 1/508 (0%)
 Frame = -2

Query: 1833 SLIMATSAVIXXXXXXXXXXXSFYYSEISEKLI-YSTDHPPAHHQIASTKNVITSKKSFN 1657
            S +M T+AVI           S +YS+++EKL  Y  D    HH     KN+I++KK  N
Sbjct: 70   SHMMGTAAVIGLSAGNRLLASSHHYSDVAEKLSSYVNDVGFPHHPSPPPKNLISAKKPSN 129

Query: 1656 LSPXXXXXXXXXXXXXLKEHVDNASDPSSLQPRLPSSNHLHEGIFDPDYPVEALLLLQKS 1477
             +P              KEHV++AS PS+  P L SS+   E   D +Y VEA LLLQKS
Sbjct: 130  YTPSSNRSIQSMKAL--KEHVESASAPSTADPDLSSSSSEVE---DEEYLVEAFLLLQKS 184

Query: 1476 MLEKQWNLSAENEIAPRGKTCKKMQVTCSGTSARQRRMDSRQQLLSRKNCSRQLSVRRKL 1297
            MLEKQWNLS +          K+ +VTCSGTSARQRR+  R+++++ K+ SR   VR  L
Sbjct: 185  MLEKQWNLSFKARQ-------KRREVTCSGTSARQRRISGRKRVMNEKSKSR---VRAAL 234

Query: 1296 RSIVSPELLQNRLKGYVKGVISEELLSHTEVVQLSTKIKXXXXXXXXXXXXXXXXGCEPS 1117
                    ++NRLKGYVKGV+SEELL+H +VV LS KIK                G EP+
Sbjct: 235  G-------VENRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERIGSEPT 287

Query: 1116 DEQLAASLQITRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXXXX 937
            DEQ+AASL+++RAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMAD       
Sbjct: 288  DEQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI 347

Query: 936  XXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRL 757
                 IEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP+HLHERLSLIRNAKIRL
Sbjct: 348  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKIRL 407

Query: 756  EERGITPSIDRIAECLNMSQKKVRNATEAVSKVISLDREAFPSLNGLPGETLHSYIADNR 577
            EE+GITPSIDRIAECLNMSQKKVRNATEA+SKV SLDREAFPSLNGLPGETLHSYIAD R
Sbjct: 408  EEKGITPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADVR 467

Query: 576  FENNPWHGVDEFALKDEVNKLIDSTLRERERDIIRLYYGLGKECLTWEDISKRIGLSRER 397
             ENNPWHGVDE+ALKDEVNKLI++TL ERERDIIRLYYGL  ECLTWEDISKRIGLSRER
Sbjct: 468  LENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRIGLSRER 527

Query: 396  VRQVGLVALEKLKHAARKRRLEAMLVKH 313
            VRQVGLVALEKLK+AARK R+EAMLVK+
Sbjct: 528  VRQVGLVALEKLKNAARKGRMEAMLVKY 555


>ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-like [Fragaria vesca
            subsp. vesca]
          Length = 511

 Score =  595 bits (1535), Expect = e-167
 Identities = 324/488 (66%), Positives = 366/488 (75%), Gaps = 5/488 (1%)
 Frame = -2

Query: 1761 YSEISEKLIYSTDHPPAHHQIASTKNVITSKKSF----NLSPXXXXXXXXXXXXXLKEHV 1594
            YS+I++KL Y  DH   + Q++STKNV+T++KS     N                L+EH 
Sbjct: 24   YSDITDKLFYLNDHGFVNCQLSSTKNVVTARKSSSKYSNSRFPSSNRHHEQSIRALQEHA 83

Query: 1593 DNASDPSSLQPRLPSS-NHLHEGIFDPDYPVEALLLLQKSMLEKQWNLSAENEIAPRGKT 1417
            D AS PSS   +L      L E   D +Y VEALLLLQKS+LEKQWNLS E +++ R  T
Sbjct: 84   DTASAPSSTTHQLLEEYTDLEEESSDLEYSVEALLLLQKSLLEKQWNLSFEKKLSTRKIT 143

Query: 1416 CKKMQVTCSGTSARQRRMDSRQQLLSRKNCSRQLSVRRKLRSIVSPELLQNRLKGYVKGV 1237
              K+ VTCSG SARQRRM ++++  S+     Q S  +  R+ +SP LLQNR  GYVKGV
Sbjct: 144  DNKIPVTCSGVSARQRRMSTKRKAFSKNTSELQPSTNKYCRATISPSLLQNRTSGYVKGV 203

Query: 1236 ISEELLSHTEVVQLSTKIKXXXXXXXXXXXXXXXXGCEPSDEQLAASLQITRAELQSKLI 1057
             S+ LL+HTEVV+LS KIK                GCEPS EQLA SL+I+R ELQSKLI
Sbjct: 204  TSDHLLTHTEVVRLSKKIKIGLSVEEHKSRLKEKLGCEPSVEQLATSLRISRTELQSKLI 263

Query: 1056 ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXXXXXXXXXIEKFDSSKGFKISTY 877
            +CSLAREKL MSNVRLVMSIAQRYDNMGAEMAD            IEKFD+SKGFKISTY
Sbjct: 264  QCSLAREKLTMSNVRLVMSIAQRYDNMGAEMADLIQGGLIGLLRGIEKFDASKGFKISTY 323

Query: 876  VYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLEERGITPSIDRIAECLNMSQ 697
            VYWWIRQGVSRALVENSRTLRLPTHLHERL LIRNAK+RLEE+GITPSID IAE LNMS+
Sbjct: 324  VYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLEEKGITPSIDSIAESLNMSK 383

Query: 696  KKVRNATEAVSKVISLDREAFPSLNGLPGETLHSYIADNRFENNPWHGVDEFALKDEVNK 517
            KKVRNATEA+SKV SLDR+AFPSLNGLPGET HSYIADNR EN PWHG+DE ALKDEVNK
Sbjct: 384  KKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSYIADNRHENIPWHGLDELALKDEVNK 443

Query: 516  LIDSTLRERERDIIRLYYGLGKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRR 337
            LI+  L ERER+IIRLYYGL  ECLTWEDISKRIGLSRERVRQVGLVALEKLKH ARK+ 
Sbjct: 444  LINLMLGEREREIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGLVALEKLKHGARKKE 503

Query: 336  LEAMLVKH 313
            LEAMLV+H
Sbjct: 504  LEAMLVQH 511


>ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Populus trichocarpa]
            gi|550325184|gb|EEE95160.2| hypothetical protein
            POPTR_0013s07290g [Populus trichocarpa]
          Length = 499

 Score =  592 bits (1527), Expect = e-166
 Identities = 329/509 (64%), Positives = 380/509 (74%), Gaps = 4/509 (0%)
 Frame = -2

Query: 1827 IMATSAVIXXXXXXXXXXXSFYYSEISEKLIYSTDHPPAHHQIASTKNVITSKKSFNLSP 1648
            +MAT++ I           SFY+S+++EKL    DH  AH+QI +TK+VI +KKS    P
Sbjct: 1    MMATASFIGLTTGKRLLSSSFYFSDLTEKLSNVNDHGVAHYQITTTKSVIVAKKSSKYGP 60

Query: 1647 XXXXXXXXXXXXXL-KEHVDNASDPSSLQPRLPSSNHLHEGIFDPDYPVEALLLLQKSML 1471
                           KE +D AS  S++     + +   E     DY VEAL+LLQKSML
Sbjct: 61   SFPSSYRNPHSNKALKELIDTASASSTVATWFKTLDDFEEESSVLDYSVEALILLQKSML 120

Query: 1470 EKQWNLSAENEIAPRGK---TCKKMQVTCSGTSARQRRMDSRQQLLSRKNCSRQLSVRRK 1300
            EKQWNLS E+  +   K   + KK+ VTCSG SARQRR++++     RKN ++      K
Sbjct: 121  EKQWNLSFESINSSDSKIKKSNKKIPVTCSGVSARQRRLNNK-----RKNQNQS-----K 170

Query: 1299 LRSIVSPELLQNRLKGYVKGVISEELLSHTEVVQLSTKIKXXXXXXXXXXXXXXXXGCEP 1120
              S +SP+LL NRLKGYVKGV+S+E+L HTEVV+LS  I+                GCEP
Sbjct: 171  FMSDISPDLLLNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSLEDHKSSLKERLGCEP 230

Query: 1119 SDEQLAASLQITRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXXX 940
            SDEQLA SL+I+RA+LQS+LI+CSLAREKLAMSNVRLVMSIAQ+ DNMGAEMAD      
Sbjct: 231  SDEQLADSLRISRADLQSQLIQCSLAREKLAMSNVRLVMSIAQKNDNMGAEMADLVQAGL 290

Query: 939  XXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIR 760
                  IEKFDSSKGFKISTYVYWWIRQGVSRALVEN RTLRLP HLHERL LIRNAKIR
Sbjct: 291  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENPRTLRLPNHLHERLGLIRNAKIR 350

Query: 759  LEERGITPSIDRIAECLNMSQKKVRNATEAVSKVISLDREAFPSLNGLPGETLHSYIADN 580
            LEE+G+TPSIDRIAE LNMSQ+KVRNATEA+SKV SLDREAFPSLNGLPGET HSYIADN
Sbjct: 351  LEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 410

Query: 579  RFENNPWHGVDEFALKDEVNKLIDSTLRERERDIIRLYYGLGKECLTWEDISKRIGLSRE 400
            R ENNPWHGVDE+ALK+EVNKLIDS L+ERER+IIRLY+GL KECLTWEDISKR+GLSRE
Sbjct: 411  RLENNPWHGVDEWALKEEVNKLIDSALQEREREIIRLYHGLDKECLTWEDISKRMGLSRE 470

Query: 399  RVRQVGLVALEKLKHAARKRRLEAMLVKH 313
            RVRQVGLVALEKLKHAARK +LEAMLVKH
Sbjct: 471  RVRQVGLVALEKLKHAARKGKLEAMLVKH 499


>gb|ESW03465.1| hypothetical protein PHAVU_011G016400g [Phaseolus vulgaris]
          Length = 504

 Score =  586 bits (1511), Expect = e-164
 Identities = 324/510 (63%), Positives = 379/510 (74%), Gaps = 6/510 (1%)
 Frame = -2

Query: 1824 MATSAVIXXXXXXXXXXXSFYYSEISEKLIYSTDHPPAHHQIASTKNVITSKKSFNLSPX 1645
            MA++AVI           S++YS+I EKL Y +D    H+QI STK+VI +KKS N +P 
Sbjct: 1    MASAAVIGLSGGKRLLSSSYHYSDIIEKLSYGSDFGSTHYQIVSTKSVIVAKKSSNYTPT 60

Query: 1644 XXXXXXXXXXXXL-KEHVDNASDPSSLQPRLPSSNHLHEGIFDPDYPVEALLLLQKSMLE 1468
                        + KE VD+A+  +    +  SSN L     +  Y VEALLLLQKSMLE
Sbjct: 61   FPAPNRQNQSIKVLKEIVDDAATVADAWFQSLSSNDLEVESSEMGYSVEALLLLQKSMLE 120

Query: 1467 KQWNLSAENE----IAPRGKTCKKMQ-VTCSGTSARQRRMDSRQQLLSRKNCSRQLSVRR 1303
            KQW+LS E E     + + K C+K+  VTCSG SARQRRM+++++   +   + QL    
Sbjct: 121  KQWSLSFEGEGVTEHSSKEKNCRKVAAVTCSGVSARQRRMNAKRKTAVKTGGAVQL---- 176

Query: 1302 KLRSIVSPELLQNRLKGYVKGVISEELLSHTEVVQLSTKIKXXXXXXXXXXXXXXXXGCE 1123
              +S +SPELLQNRLKGYVKGV+SEELLSH +VV LS KIK                GCE
Sbjct: 177  --KSKISPELLQNRLKGYVKGVVSEELLSHAQVVSLSEKIKVGLSLEEHKSRMKERLGCE 234

Query: 1122 PSDEQLAASLQITRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXX 943
            PSD+++A SL+I+  EL+ K++ECSLAREKLAMSNVRLVMSIAQRY+N G EM D     
Sbjct: 235  PSDDEIATSLKISSTELREKMLECSLAREKLAMSNVRLVMSIAQRYENAGTEMGDLVQGG 294

Query: 942  XXXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKI 763
                   IEKFDSSKGFKISTYVYWWIRQGVS+AL+ENSRTLRLP HLHERLSLIRNAK+
Sbjct: 295  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALIENSRTLRLPAHLHERLSLIRNAKL 354

Query: 762  RLEERGITPSIDRIAECLNMSQKKVRNATEAVSKVISLDREAFPSLNGLPGETLHSYIAD 583
            RLEERGITP+IDRIA+ LNMSQKKVRNATEA+SK ISLDREAFPSLNGL G+T HSYIAD
Sbjct: 355  RLEERGITPTIDRIAQHLNMSQKKVRNATEAISKTISLDREAFPSLNGLRGDTHHSYIAD 414

Query: 582  NRFENNPWHGVDEFALKDEVNKLIDSTLRERERDIIRLYYGLGKECLTWEDISKRIGLSR 403
            NR EN PW GVDE+ALKDEVN+LI+ TL+ERER+IIRLYYGLGKECLTWEDISKR+GLSR
Sbjct: 415  NRVENIPWEGVDEWALKDEVNRLINVTLKEREREIIRLYYGLGKECLTWEDISKRMGLSR 474

Query: 402  ERVRQVGLVALEKLKHAARKRRLEAMLVKH 313
            ERVRQVGLVALEKLKH AR R LEAML+KH
Sbjct: 475  ERVRQVGLVALEKLKHGARNRELEAMLLKH 504


>ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-like [Cucumis sativus]
            gi|449514942|ref|XP_004164521.1| PREDICTED: RNA
            polymerase sigma factor sigA-like [Cucumis sativus]
          Length = 508

 Score =  585 bits (1509), Expect = e-164
 Identities = 318/510 (62%), Positives = 384/510 (75%), Gaps = 5/510 (0%)
 Frame = -2

Query: 1827 IMATSAVIXXXXXXXXXXXSFYYSEISEKLIYSTDHPPAHHQIASTKNVITSKKSFNLSP 1648
            +MAT+A+I           S YYS+ +EK++Y+ D+     Q++S+K+V+ +K S N SP
Sbjct: 1    MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSP 60

Query: 1647 XXXXXXXXXXXXXL--KEHVDNASDPSSLQPRLPSSNHLHEGIFDPDYPVEALLLLQKSM 1474
                            KEHV+  S P + +P   +++   E   +  Y VEALLLLQKSM
Sbjct: 61   RYPSSNRHSQQCIKAVKEHVETPSSPIA-EPWHNTTSWEDEET-ELKYTVEALLLLQKSM 118

Query: 1473 LEKQWNLSAENEIA---PRGKTCKKMQVTCSGTSARQRRMDSRQQLLSRKNCSRQLSVRR 1303
            LEKQW+LS E  ++   P+ KT KK+ VTCSG SARQRRM S++++ S+     Q  + +
Sbjct: 119  LEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISK 178

Query: 1302 KLRSIVSPELLQNRLKGYVKGVISEELLSHTEVVQLSTKIKXXXXXXXXXXXXXXXXGCE 1123
            +LR  +SPELLQNRLKGYVKG++SEELLSH EVV+LS KIK                GCE
Sbjct: 179  QLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCE 238

Query: 1122 PSDEQLAASLQITRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXX 943
            PS++QLA SL+I+RAEL+S+++E SLAREKLAMSNVRLVMSIAQRYDNMGAEMAD     
Sbjct: 239  PSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 298

Query: 942  XXXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKI 763
                   IEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL LIRNAK+
Sbjct: 299  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV 358

Query: 762  RLEERGITPSIDRIAECLNMSQKKVRNATEAVSKVISLDREAFPSLNGLPGETLHSYIAD 583
            +L+E+GITPS+DRIAE LNMS+KKV+NATEA+SKV SLDREAFPSLNGLPGET HSYIAD
Sbjct: 359  KLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 418

Query: 582  NRFENNPWHGVDEFALKDEVNKLIDSTLRERERDIIRLYYGLGKECLTWEDISKRIGLSR 403
            N  ENNPWHG D + LK EVN+LI+ TL +RER+IIRLY+GL  ECLTWE+ISKRIGLSR
Sbjct: 419  NCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 478

Query: 402  ERVRQVGLVALEKLKHAARKRRLEAMLVKH 313
            ERVRQVGLVALEKLK AA+ R++EAML+KH
Sbjct: 479  ERVRQVGLVALEKLKKAAKTRKMEAMLLKH 508


>ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutrema salsugineum]
            gi|557097090|gb|ESQ37598.1| hypothetical protein
            EUTSA_v10002486mg [Eutrema salsugineum]
          Length = 519

 Score =  582 bits (1499), Expect = e-163
 Identities = 327/521 (62%), Positives = 388/521 (74%), Gaps = 16/521 (3%)
 Frame = -2

Query: 1827 IMATSAVIXXXXXXXXXXXSFYYSEISEKLIYSTDHPPAHHQIASTKNVITSKK----SF 1660
            +MAT+AVI           SFYYS+++EK +   DH  + + IAST++ IT+KK    S 
Sbjct: 1    MMATAAVIGLNAGKRLLSSSFYYSDVTEKFLSVNDHCSSQYHIASTRSGITAKKTPSSSS 60

Query: 1659 NLSPXXXXXXXXXXXXXL-KEHVDNASDPSSLQPRLP--SSNHLHEGIFDPD--YPVEAL 1495
            N SP               KE VD  +  SS+QP LP  S   +    ++ D  + VEAL
Sbjct: 61   NYSPSLPSSSRHTQSAKALKETVDVVA--SSVQPWLPPGSDKEMEGESYEDDLGHSVEAL 118

Query: 1494 LLLQKSMLEKQWNLSAENEI-----APRGKTCKKMQVTCSGTSARQRRMDSRQQL-LSRK 1333
            LLLQKSMLEKQWNLS E        + +  T KK  VTCSG SARQRR+ ++++  +S  
Sbjct: 119  LLLQKSMLEKQWNLSFEKAATSESPSKKRMTRKKNPVTCSGISARQRRIGAKKKTNMSHV 178

Query: 1332 NCSRQLSVRRKLRSIVSPELLQN-RLKGYVKGVISEELLSHTEVVQLSTKIKXXXXXXXX 1156
                ++S  ++++S+++ EL QN R+KGYV+GV+SE++LSH EVV+LS KIK        
Sbjct: 179  KVVSEVSSGKQVKSVINSELFQNNRVKGYVRGVVSEDVLSHAEVVRLSKKIKSGLRLDDH 238

Query: 1155 XXXXXXXXGCEPSDEQLAASLQITRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNM 976
                    GCEPSDEQLA SL+I+R ELQ+ L+EC LAREKLAMSNVRLVMSIAQRYDNM
Sbjct: 239  KSRLKDRLGCEPSDEQLAISLKISRGELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNM 298

Query: 975  GAEMADXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLH 796
            GAEM+D            IEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLH
Sbjct: 299  GAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLH 358

Query: 795  ERLSLIRNAKIRLEERGITPSIDRIAECLNMSQKKVRNATEAVSKVISLDREAFPSLNGL 616
            ERL LIRNAK+RL+E+GITPSIDRIAE LNMSQKKVRNATEAVSK+ SLDR+AFPSLNGL
Sbjct: 359  ERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQKKVRNATEAVSKIFSLDRDAFPSLNGL 418

Query: 615  PGETLHSYIADNRFENNPWHGVDEFALKDEVNKLIDSTLRERERDIIRLYYGLGKECLTW 436
            PGET HSYIADNR ENNPWHG DE+ALKDEV+KLI +TL ERER+IIRLYYGL KECLTW
Sbjct: 419  PGETHHSYIADNRLENNPWHGYDEWALKDEVSKLISATLGEREREIIRLYYGLDKECLTW 478

Query: 435  EDISKRIGLSRERVRQVGLVALEKLKHAARKRRLEAMLVKH 313
            EDISKRIGLSRERVRQVGLVALEKLKHAARKR++EAM++K+
Sbjct: 479  EDISKRIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 519