BLASTX nr result

ID: Catharanthus22_contig00000540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00000540
         (297 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004235542.1| PREDICTED: auxin-binding protein ABP19a-like...    55   1e-05
gb|ABV03161.1| germin-like protein [Chimonanthus praecox]              55   1e-05

>ref|XP_004235542.1| PREDICTED: auxin-binding protein ABP19a-like [Solanum lycopersicum]
          Length = 208

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = -3

Query: 295 AFFGNNLPTKLVAKTTFLDEALIKKLKSVLGGT 197
           A F N+LPTKLVA TTFLDEA IKKLK VLGGT
Sbjct: 175 ALFANDLPTKLVAATTFLDEATIKKLKGVLGGT 207


>gb|ABV03161.1| germin-like protein [Chimonanthus praecox]
          Length = 214

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/34 (73%), Positives = 30/34 (88%)
 Frame = -3

Query: 295 AFFGNNLPTKLVAKTTFLDEALIKKLKSVLGGTG 194
           A F NNLP++LV KTTFLD+A +KKLK+VLGGTG
Sbjct: 181 ALFANNLPSELVEKTTFLDDAQVKKLKAVLGGTG 214


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