BLASTX nr result
ID: Catharanthus22_contig00000388
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00000388
(361 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ESW23765.1| hypothetical protein PHAVU_004G073400g, partial [... 59 9e-07
gb|ESW23644.1| hypothetical protein PHAVU_004G064800g [Phaseolus... 59 9e-07
gb|AGV54682.1| ribulose bisphosphate carboxylase [Phaseolus vulg... 59 9e-07
emb|CAA42617.1| ribulose bisphosphate carboxylase [Phaseolus vul... 59 9e-07
emb|CAA42618.1| ribulose bisphosphate carboxylase [Phaseolus vul... 59 9e-07
gb|AEA48975.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 59 9e-07
sp|P00865.1|RBS1_SOYBN RecName: Full=Ribulose bisphosphate carbo... 57 3e-06
ref|NP_001241137.1| ribulose bisphosphate carboxylase small chai... 57 3e-06
ref|NP_001235266.1| ribulose-1,5-bisphosphate carboxylase small ... 57 3e-06
gb|AFS41754.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 57 3e-06
gb|AFS41753.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 57 3e-06
gb|AFS41748.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 57 3e-06
gb|AFS41733.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 57 3e-06
gb|AFS41732.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 57 3e-06
gb|AFS41725.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 57 3e-06
gb|AEX60843.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 57 3e-06
gb|AEX60842.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 57 3e-06
gb|AEX60839.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 57 3e-06
ref|NP_001235314.1| uncharacterized protein LOC100500504 [Glycin... 57 3e-06
gb|ACU13285.1| unknown [Glycine max] 57 3e-06
>gb|ESW23765.1| hypothetical protein PHAVU_004G073400g, partial [Phaseolus
vulgaris]
Length = 121
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPGY
Sbjct: 96 FIRIIGFDNVRQVQCISFIAYKPPGY 121
>gb|ESW23644.1| hypothetical protein PHAVU_004G064800g [Phaseolus vulgaris]
gi|561024960|gb|ESW23645.1| hypothetical protein
PHAVU_004G064900g [Phaseolus vulgaris]
Length = 180
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPGY
Sbjct: 155 FIRIIGFDNVRQVQCISFIAYKPPGY 180
>gb|AGV54682.1| ribulose bisphosphate carboxylase [Phaseolus vulgaris]
Length = 180
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPGY
Sbjct: 155 FIRIIGFDNVRQVQCISFIAYKPPGY 180
>emb|CAA42617.1| ribulose bisphosphate carboxylase [Phaseolus vulgaris]
Length = 135
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPGY
Sbjct: 110 FIRIIGFDNVRQVQCISFIAYKPPGY 135
>emb|CAA42618.1| ribulose bisphosphate carboxylase [Phaseolus vulgaris]
gi|21053|emb|CAA40339.1| small subunit of ribulose
1,5-bisphosphate carboxylase/oxygenase [Phaseolus
vulgaris]
Length = 180
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPGY
Sbjct: 155 FIRIIGFDNVRQVQCISFIAYKPPGY 180
>gb|AEA48975.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit [Rosa
roxburghii]
Length = 179
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPGY
Sbjct: 154 FIRIIGFDNVRQVQCISFIAYKPPGY 179
>sp|P00865.1|RBS1_SOYBN RecName: Full=Ribulose bisphosphate carboxylase small chain 1,
chloroplastic; Short=RuBisCO small subunit 1; Flags:
Precursor gi|18742|emb|CAA23736.1| rubpcase [Glycine
max]
Length = 178
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 153 FIRIIGFDNVRQVQCISFIAYKPPGF 178
>ref|NP_001241137.1| ribulose bisphosphate carboxylase small chain 1, chloroplastic-like
[Glycine max] gi|10946375|gb|AAG24882.1|AF303939_1
ribulose-1,5-bisphosphate carboxylase small subunit
rbcS1 [Glycine max] gi|1055368|gb|AAA81328.1|
ribulose-1,5-bisphosphate carboxylase small subunit
[Glycine max]
Length = 178
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 153 FIRIIGFDNVRQVQCISFIAYKPPGF 178
>ref|NP_001235266.1| ribulose-1,5-bisphosphate carboxylase small subunit rbcS2 [Glycine
max] gi|10946377|gb|AAG24883.1|AF303940_1
ribulose-1,5-bisphosphate carboxylase small subunit
rbcS2 [Glycine max]
Length = 178
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 153 FIRIIGFDNVRQVQCISFIAYKPPGF 178
>gb|AFS41754.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium mustelinum]
Length = 179
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 154 FIRIIGFDNVRQVQCISFIAYKPPGF 179
>gb|AFS41753.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium mustelinum]
Length = 179
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 154 FIRIIGFDNVRQVQCISFIAYKPPGF 179
>gb|AFS41748.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium tomentosum]
Length = 179
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 154 FIRIIGFDNVRQVQCISFIAYKPPGF 179
>gb|AFS41733.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
Length = 179
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 154 FIRIIGFDNVRQVQCISFIAYKPPGF 179
>gb|AFS41732.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366486|gb|AFS41740.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366528|gb|AFS41761.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium darwinii]
Length = 179
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 154 FIRIIGFDNVRQVQCISFIAYKPPGF 179
>gb|AFS41725.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium raimondii]
Length = 179
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 154 FIRIIGFDNVRQVQCISFIAYKPPGF 179
>gb|AEX60843.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366484|gb|AFS41739.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366500|gb|AFS41747.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium tomentosum]
gi|406366526|gb|AFS41760.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium darwinii]
Length = 179
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 154 FIRIIGFDNVRQVQCISFIAYKPPGF 179
>gb|AEX60842.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366450|gb|AFS41722.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium arboreum] gi|406366452|gb|AFS41723.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium arboreum]
gi|406366466|gb|AFS41730.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium hirsutum] gi|406366468|gb|AFS41731.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium hirsutum]
gi|406366480|gb|AFS41737.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366496|gb|AFS41745.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium tomentosum]
gi|406366510|gb|AFS41752.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium mustelinum] gi|406366524|gb|AFS41759.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium darwinii]
Length = 179
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 154 FIRIIGFDNVRQVQCISFIAYKPPGF 179
>gb|AEX60839.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366482|gb|AFS41738.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366498|gb|AFS41746.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium tomentosum]
gi|406366522|gb|AFS41758.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium darwinii]
Length = 179
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 154 FIRIIGFDNVRQVQCISFIAYKPPGF 179
>ref|NP_001235314.1| uncharacterized protein LOC100500504 [Glycine max]
gi|255630492|gb|ACU15604.1| unknown [Glycine max]
Length = 178
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 153 FIRIIGFDNVRQVQCISFIAYKPPGF 178
>gb|ACU13285.1| unknown [Glycine max]
Length = 178
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 1 FIRIIGFDNVRQVQCISFIAYKPPGY 78
FIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 153 FIRIIGFDNVRQVQCISFIAYKPPGF 178