BLASTX nr result
ID: Catharanthus22_contig00000347
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00000347
(1458 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 162 4e-37
emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera] 157 1e-35
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 156 2e-35
gb|EXB65256.1| hypothetical protein L484_025334 [Morus notabilis] 155 5e-35
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 155 5e-35
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 153 2e-34
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 151 6e-34
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 149 4e-33
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 147 9e-33
gb|AFB73911.1| polyprotein [Citrus sinensis] 146 2e-32
gb|AFB73912.1| polyprotein [Citrus sinensis] 145 4e-32
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 144 7e-32
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi] 144 1e-31
emb|CAN65981.1| hypothetical protein VITISV_017970 [Vitis vinifera] 143 2e-31
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 142 5e-31
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 141 6e-31
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 141 6e-31
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 140 1e-30
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 140 2e-30
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 140 2e-30
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 162 bits (409), Expect = 4e-37
Identities = 81/149 (54%), Positives = 95/149 (63%)
Frame = +3
Query: 6 GYVDSDYAGDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXXW 185
GYVDSDY GD D R STT Y FTL G +SWKSQLQ +VALS W
Sbjct: 621 GYVDSDYVGDLDKRXSTTGYIFTLFGGPVSWKSQLQSIVALSTTKAEYIAATEAMKEALW 680
Query: 186 LQGLLFELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLINIEK 365
LQGL+ EL VL S IF DSQS + LC NP +H RTKHIDV+YHFIRE +SSG + +EK
Sbjct: 681 LQGLVKELXVLNSVVEIFLDSQSAIQLCNNPXFHXRTKHIDVRYHFIRETISSGAMKLEK 740
Query: 366 ISTNDNPADFGTKIVTTDKFSLCRELLHI 452
IS DNPAD TK++ KF +L+ +
Sbjct: 741 ISXVDNPADMATKVLPVTKFKYSLDLVQV 769
>emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera]
Length = 1842
Score = 157 bits (396), Expect = 1e-35
Identities = 81/148 (54%), Positives = 99/148 (66%)
Frame = +3
Query: 3 VGYVDSDYAGDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXX 182
+GYVD DYAGD D R+STTSY FTL G ++WKSQLQ +VALS
Sbjct: 1695 IGYVDLDYAGDLDKRRSTTSYIFTLFGGPVNWKSQLQSIVALSTXEVEYITTTKAMKETL 1754
Query: 183 WLQGLLFELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLINIE 362
WLQGL+ EL VL S IF+DSQS + LCKN V+HERTKH++V+YHFIRE VSS + +E
Sbjct: 1755 WLQGLVKELGVLNSVVEIFSDSQSTIQLCKNXVFHERTKHVNVRYHFIREIVSSRKMKLE 1814
Query: 363 KISTNDNPADFGTKIVTTDKFSLCRELL 446
KIS DNP D TK++ KF +L+
Sbjct: 1815 KISLADNPIDMATKVLPVRKFXYYLDLV 1842
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 156 bits (395), Expect = 2e-35
Identities = 76/146 (52%), Positives = 95/146 (65%)
Frame = +3
Query: 6 GYVDSDYAGDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXXW 185
GYVDSD+AGDHD RKSTT Y FTLAG +SW S+LQ VVALS W
Sbjct: 1154 GYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIW 1213
Query: 186 LQGLLFELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLINIEK 365
+Q L+ EL + + ++ DSQS LH+ +NP +H RTKHI V+YHF+RE V G ++++K
Sbjct: 1214 MQRLMEELGHKQEQITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQK 1273
Query: 366 ISTNDNPADFGTKIVTTDKFSLCREL 443
I TNDN AD TK + TDKF CR L
Sbjct: 1274 IHTNDNLADAMTKSINTDKFIWCRSL 1299
>gb|EXB65256.1| hypothetical protein L484_025334 [Morus notabilis]
Length = 987
Score = 155 bits (391), Expect = 5e-35
Identities = 72/131 (54%), Positives = 90/131 (68%)
Frame = +3
Query: 30 GDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXXWLQGLLFEL 209
GD D R+ST++Y TL GNCISWKSQLQ VVALS W+QGLL EL
Sbjct: 101 GDRDRRQSTSAYMMTLDGNCISWKSQLQLVVALSSIEAEYIAGTKGFKEAIWIQGLLSEL 160
Query: 210 HVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLINIEKISTNDNPA 389
+LK I+ DSQS +HLCKNP+YH++TKHIDV++HFIREKV G+I +EKI T DNP+
Sbjct: 161 KILKGNTTIYLDSQSAIHLCKNPIYHDKTKHIDVRHHFIREKVEEGIIKLEKIDTEDNPS 220
Query: 390 DFGTKIVTTDK 422
D TK + ++
Sbjct: 221 DMATKKIRPNR 231
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 155 bits (391), Expect = 5e-35
Identities = 75/144 (52%), Positives = 94/144 (65%)
Frame = +3
Query: 6 GYVDSDYAGDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXXW 185
GYVDSD+AGDHD RKSTT Y FTLAG +SW S+LQ VVALS W
Sbjct: 1154 GYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIW 1213
Query: 186 LQGLLFELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLINIEK 365
+Q L+ EL + + ++ DSQS LH+ +NP +H RTKHI V+YHF+RE V G ++++K
Sbjct: 1214 MQRLMEELGHKQEQITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQK 1273
Query: 366 ISTNDNPADFGTKIVTTDKFSLCR 437
I TNDN AD TK + TDKF CR
Sbjct: 1274 IHTNDNLADVMTKPINTDKFVWCR 1297
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 153 bits (386), Expect = 2e-34
Identities = 74/144 (51%), Positives = 93/144 (64%)
Frame = +3
Query: 6 GYVDSDYAGDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXXW 185
GYVDSD+AGDHD RKSTT Y FTLAG +SW S+LQ VVALS W
Sbjct: 1154 GYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIW 1213
Query: 186 LQGLLFELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLINIEK 365
+Q L+ EL + + ++ DSQS LH+ +NP +H RTKHI V+YHF+RE V G ++++K
Sbjct: 1214 MQRLMEELGHKQEQITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQK 1273
Query: 366 ISTNDNPADFGTKIVTTDKFSLCR 437
I TNDN AD TK + DKF CR
Sbjct: 1274 IHTNDNLADVMTKPINADKFVWCR 1297
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 151 bits (382), Expect = 6e-34
Identities = 73/144 (50%), Positives = 92/144 (63%)
Frame = +3
Query: 6 GYVDSDYAGDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXXW 185
GYVDSD+AGDHD RKSTT Y FTL G +SW S+LQ VVALS W
Sbjct: 1154 GYVDSDFAGDHDKRKSTTGYVFTLTGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIW 1213
Query: 186 LQGLLFELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLINIEK 365
+Q L+ EL + + ++ DSQS LH+ +NP +H RTKHI V+YHF+RE V G ++++K
Sbjct: 1214 MQRLMEELGHKQEQITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQK 1273
Query: 366 ISTNDNPADFGTKIVTTDKFSLCR 437
I TNDN AD TK + DKF CR
Sbjct: 1274 IHTNDNLADVMTKPINADKFVWCR 1297
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 149 bits (375), Expect = 4e-33
Identities = 76/144 (52%), Positives = 91/144 (63%)
Frame = +3
Query: 6 GYVDSDYAGDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXXW 185
GYVDSDYAGD D KSTT Y F +AG +SW S+LQ VVA S W
Sbjct: 1147 GYVDSDYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQAVVATSTTEAEYVAATQASKEAIW 1206
Query: 186 LQGLLFELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLINIEK 365
L+ LL EL + +F DSQS LHL +NP +H RTKHI V+YHFIREKV G ++++K
Sbjct: 1207 LKMLLEELGHKQEFVSLFCDSQSALHLARNPAFHSRTKHIRVQYHFIREKVKEGTVDLQK 1266
Query: 366 ISTNDNPADFGTKIVTTDKFSLCR 437
I T DN ADF TKI+ DKF+ CR
Sbjct: 1267 IHTADNVADFLTKIINVDKFTWCR 1290
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 147 bits (372), Expect = 9e-33
Identities = 74/144 (51%), Positives = 90/144 (62%)
Frame = +3
Query: 6 GYVDSDYAGDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXXW 185
GYVDSD+AGD D RKSTT Y FTLAG +SW S+LQ VVALS W
Sbjct: 1154 GYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIW 1213
Query: 186 LQGLLFELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLINIEK 365
Q LL EL + K ++ DS S LH+ +NP +H RTKHI V+YHF+RE V G +N++K
Sbjct: 1214 TQRLLEELGHKQQKITVYCDSPSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVNMQK 1273
Query: 366 ISTNDNPADFGTKIVTTDKFSLCR 437
I T DN AD TK + +DKF CR
Sbjct: 1274 IHTKDNLADVMTKPINSDKFIWCR 1297
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 146 bits (368), Expect = 2e-32
Identities = 73/140 (52%), Positives = 91/140 (65%)
Frame = +3
Query: 6 GYVDSDYAGDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXXW 185
GYVDSD+AGD D RKSTT Y FTLAG +SW S+LQ VVALS W
Sbjct: 1158 GYVDSDFAGDLDKRKSTTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKKAIW 1217
Query: 186 LQGLLFELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLINIEK 365
+Q LL EL + K ++F DSQS LH+ +NP +H RTKHI V+YHF+RE V G ++++K
Sbjct: 1218 IQRLLEELGHKQQKILVFCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEDGSVDLQK 1277
Query: 366 ISTNDNPADFGTKIVTTDKF 425
I T +N AD TK + TDKF
Sbjct: 1278 IHTKENLADVLTKPINTDKF 1297
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 145 bits (366), Expect = 4e-32
Identities = 73/140 (52%), Positives = 90/140 (64%)
Frame = +3
Query: 6 GYVDSDYAGDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXXW 185
GYVDSD+AGD D RKSTT Y FTLAG +SW S+LQ VVALS W
Sbjct: 1158 GYVDSDFAGDLDKRKSTTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKEAIW 1217
Query: 186 LQGLLFELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLINIEK 365
+Q LL EL + K +F DSQS LH+ +NP +H RTKHI V+YHF+RE V G ++++K
Sbjct: 1218 IQRLLEELGHKQQKIPVFCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEDGSVDLQK 1277
Query: 366 ISTNDNPADFGTKIVTTDKF 425
I T +N AD TK + TDKF
Sbjct: 1278 IHTKENLADVLTKSINTDKF 1297
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 144 bits (364), Expect = 7e-32
Identities = 72/147 (48%), Positives = 94/147 (63%)
Frame = +3
Query: 6 GYVDSDYAGDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXXW 185
GY D+D AGD D RKS+T Y FT +G ISW+S+LQ VALS W
Sbjct: 1177 GYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIW 1236
Query: 186 LQGLLFELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLINIEK 365
L+ L EL + + + V++ DSQS + L KN +YH RTKHIDV+YH+IRE V + + K
Sbjct: 1237 LKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLK 1296
Query: 366 ISTNDNPADFGTKIVTTDKFSLCRELL 446
ISTN+NPAD TK+V +KF LC+EL+
Sbjct: 1297 ISTNENPADMLTKVVPRNKFELCKELV 1323
>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
Length = 297
Score = 144 bits (362), Expect = 1e-31
Identities = 69/150 (46%), Positives = 94/150 (62%)
Frame = +3
Query: 3 VGYVDSDYAGDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXX 182
VGY DSD+AGD D ++ST+ Y FTL G +SW+S LQ +ALS
Sbjct: 144 VGYCDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQSTIALSTTEAEYIAATEAVKEAI 203
Query: 183 WLQGLLFELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLINIE 362
WL+GLL +L V++ +F D+QS + L KN YH RTKHIDVKYH++RE + G + ++
Sbjct: 204 WLKGLLGDLGVIQENIAVFCDNQSAIFLAKNQTYHARTKHIDVKYHYVREIIEGGDVLLK 263
Query: 363 KISTNDNPADFGTKIVTTDKFSLCRELLHI 452
KI T DNP+D TK+V+ KF C +L+ I
Sbjct: 264 KIDTKDNPSDMLTKVVSEVKFQHCLKLIQI 293
>emb|CAN65981.1| hypothetical protein VITISV_017970 [Vitis vinifera]
Length = 421
Score = 143 bits (361), Expect = 2e-31
Identities = 78/149 (52%), Positives = 92/149 (61%), Gaps = 8/149 (5%)
Frame = +3
Query: 3 VGYVDSDYAGDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXX 182
+GYVDSDYA D D R+ST Y FTL G +SWKSQLQ +VALS
Sbjct: 271 IGYVDSDYARDLDKRRSTIGYIFTLFGGPVSWKSQLQLIVALSTTEAKYIAVTEAKYIIA 330
Query: 183 W--------LQGLLFELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKV 338
LQGL+ EL VL S IF +SQS + LCKN V+HERTKH+DV+YHFIRE V
Sbjct: 331 TEAMKEAILLQGLVKELGVLNSVVEIFLNSQSAIQLCKNLVFHERTKHVDVRYHFIREIV 390
Query: 339 SSGLINIEKISTNDNPADFGTKIVTTDKF 425
S G + +EKIST DN AD TK++ KF
Sbjct: 391 SLGAVKLEKISTTDNSADMATKVLLVSKF 419
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 142 bits (357), Expect = 5e-31
Identities = 74/150 (49%), Positives = 93/150 (62%)
Frame = +3
Query: 3 VGYVDSDYAGDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXX 182
VGYVDSD+AGD D R+S T Y FT+ G +SWK+ LQ VALS
Sbjct: 1060 VGYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQATVALSTTEVEYMAISEACKEAI 1119
Query: 183 WLQGLLFELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLINIE 362
WL+GL EL + S IF DSQS + K+ ++HERTKHIDV+YHFIR ++ G + +
Sbjct: 1120 WLRGLYTELCGVTSCINIFCDSQSAICFTKDQMFHERTKHIDVRYHFIRGVIAEGDVKVC 1179
Query: 363 KISTNDNPADFGTKIVTTDKFSLCRELLHI 452
KIST+DNPAD TK V T KF LC L+ +
Sbjct: 1180 KISTHDNPADMMTKPVPTTKFELCSSLVGV 1209
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 141 bits (356), Expect = 6e-31
Identities = 74/150 (49%), Positives = 93/150 (62%)
Frame = +3
Query: 3 VGYVDSDYAGDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXX 182
VGYVDSD+AGD D R+S T Y FT+ G +SWK+ LQ VALS
Sbjct: 1030 VGYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQATVALSTTEAEYMAISEACKEAI 1089
Query: 183 WLQGLLFELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLINIE 362
WL+GL EL + S IF DSQS + L K+ ++HERTKHIDV+YHFIR ++ G + +
Sbjct: 1090 WLRGLYTELCGVTSCINIFCDSQSAICLTKDQMFHERTKHIDVRYHFIRGVIAEGDVKVC 1149
Query: 363 KISTNDNPADFGTKIVTTDKFSLCRELLHI 452
KIST+DNPAD TK V KF LC L+ +
Sbjct: 1150 KISTHDNPADMMTKPVPATKFELCSSLVGV 1179
>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 141 bits (356), Expect = 6e-31
Identities = 75/150 (50%), Positives = 88/150 (58%)
Frame = +3
Query: 3 VGYVDSDYAGDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXX 182
VGY D+DYA D D R+S T FTL GN ISWKS LQ VVA S
Sbjct: 1204 VGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRVVAQSTTESEYMSLTEAVKEAI 1263
Query: 183 WLQGLLFELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLINIE 362
WL+GLL + + IF DSQS + L KN V+HERTKHIDVKYHFIRE +S G + +
Sbjct: 1264 WLKGLLKDFGYEQKSVEIFCDSQSAIALSKNNVHHERTKHIDVKYHFIREIISDGTVEVL 1323
Query: 363 KISTNDNPADFGTKIVTTDKFSLCRELLHI 452
KIST NPAD TK++ KF LL +
Sbjct: 1324 KISTEKNPADIFTKVLAVSKFQAALNLLRV 1353
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 140 bits (353), Expect = 1e-30
Identities = 73/150 (48%), Positives = 92/150 (61%)
Frame = +3
Query: 3 VGYVDSDYAGDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXX 182
VGYVDSD+AGD D R+S Y FT+ G +SWK+ LQ VALS
Sbjct: 987 VGYVDSDFAGDLDRRRSLAGYVFTIGGCAVSWKANLQATVALSTTEAEYMAISEACKETI 1046
Query: 183 WLQGLLFELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLINIE 362
WL+GL EL + S IF DSQS + L K+ ++HERTKHIDV+YHFIR ++ G + +
Sbjct: 1047 WLRGLYTELCGVTSCINIFCDSQSAICLTKDQMFHERTKHIDVRYHFIRSVITEGDVKVC 1106
Query: 363 KISTNDNPADFGTKIVTTDKFSLCRELLHI 452
KIST+DNPAD TK V KF LC L+ +
Sbjct: 1107 KISTHDNPADMMTKPVPATKFELCSSLVGV 1136
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 140 bits (352), Expect = 2e-30
Identities = 69/152 (45%), Positives = 94/152 (61%)
Frame = +3
Query: 3 VGYVDSDYAGDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXX 182
+GYVDSDYA D D R+S T Y FT+ +SW++ LQ VVALS
Sbjct: 1182 IGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELI 1241
Query: 183 WLQGLLFELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLINIE 362
WL+GL EL ++S + DSQS ++L K+ ++HERTKHID+KYHF+R+ + G + +
Sbjct: 1242 WLKGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDVIEEGKLKVC 1301
Query: 363 KISTNDNPADFGTKIVTTDKFSLCRELLHIDE 458
KIST+DNPAD TK + KF LC L+ + E
Sbjct: 1302 KISTHDNPADMMTKPIPVAKFELCSSLVGLIE 1333
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 140 bits (352), Expect = 2e-30
Identities = 69/152 (45%), Positives = 94/152 (61%)
Frame = +3
Query: 3 VGYVDSDYAGDHDGRKSTTSYFFTLAGNCISWKSQLQPVVALSXXXXXXXXXXXXXXXXX 182
+GYVDSDYA D D R+S T Y FT+ +SW++ LQ VVALS
Sbjct: 1182 IGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELI 1241
Query: 183 WLQGLLFELHVLKSKAVIFTDSQSCLHLCKNPVYHERTKHIDVKYHFIREKVSSGLINIE 362
WL+GL EL ++S + DSQS ++L K+ ++HERTKHID+KYHF+R+ + G + +
Sbjct: 1242 WLKGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDVIEEGKLKVC 1301
Query: 363 KISTNDNPADFGTKIVTTDKFSLCRELLHIDE 458
KIST+DNPAD TK + KF LC L+ + E
Sbjct: 1302 KISTHDNPADMMTKPIPVAKFELCSSLVGLIE 1333