BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00000334
         (2980 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1044   0.0  
ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1036   0.0  
gb|EMJ09551.1| hypothetical protein PRUPE_ppa001778mg [Prunus pe...  1023   0.0  
ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1021   0.0  
gb|EXB57576.1| DEAD-box ATP-dependent RNA helicase 3 [Morus nota...  1008   0.0  
ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putativ...  1007   0.0  
ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|5...   996   0.0  
ref|XP_006382233.1| hypothetical protein POPTR_0005s00200g [Popu...   985   0.0  
ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   983   0.0  
ref|XP_006841548.1| hypothetical protein AMTR_s00003p00168720 [A...   983   0.0  
ref|XP_006382234.1| hypothetical protein POPTR_0005s00200g [Popu...   982   0.0  
ref|XP_006480315.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   981   0.0  
ref|XP_004135577.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   981   0.0  
ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   980   0.0  
emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]   976   0.0  
ref|XP_002330040.1| predicted protein [Populus trichocarpa]           975   0.0  
ref|XP_006423936.1| hypothetical protein CICLE_v10027858mg [Citr...   963   0.0  
ref|XP_006423935.1| hypothetical protein CICLE_v10027858mg [Citr...   963   0.0  
gb|EOY11808.1| DEAD box RNA helicase isoform 1 [Theobroma cacao]      957   0.0  
ref|XP_003554590.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   955   0.0  

>ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Solanum tuberosum]
          Length = 744

 Score = 1044 bits (2700), Expect = 0.0
 Identities = 559/767 (72%), Positives = 625/767 (81%), Gaps = 5/767 (0%)
 Frame = -2

Query: 2856 MACSSSIIGVSSIYQATPSSLELPKRPTSNSPLSLPFS-DKSHFNGLKSSSSNTHSRFRQ 2680
            MA SSSIIGVSSIYQ  PS LEL +RPT+  PLSLPFS +KS+F+         H R R+
Sbjct: 1    MASSSSIIGVSSIYQTNPS-LELSRRPTATPPLSLPFSTEKSNFH--------VHVRLRR 51

Query: 2679 SAACNGNSFVTSAVVTPNS-VLSEEAFKGFGGFDKDSLDVSENEYETEEDEVAGEIAVEN 2503
                    F+ SAVVTPNS VLSEEAFKG GGF KDSL+VSE+EY++E++    E    N
Sbjct: 52   P-------FLASAVVTPNSSVLSEEAFKGIGGFGKDSLNVSESEYDSEDEVEDNE---SN 101

Query: 2502 KNELVVSKLGLPQKLVESLEGRGITELFPIQRAVLTPALEGRDIIARAKTGTGKTLAFGI 2323
            ++EL VSKLGLP +LVE+LE RGIT+LFPIQRAVL PALEGRDIIARAKTGTGKTLAFGI
Sbjct: 102  EDELAVSKLGLPHRLVEALEKRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGI 161

Query: 2322 PIIKKLTEDXXXXXXXXXXXXXXXXXXXAPTRELAKQVEKEIKESAPYLNTVCVYGGVSY 2143
            P++KKL+ D                    PTRELA QVEKE+KESAPYLNTVC+YGGVSY
Sbjct: 162  PVLKKLSTDEEMRNTQRRGRLPKILVLA-PTRELANQVEKEMKESAPYLNTVCIYGGVSY 220

Query: 2142 ITQQNALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADQMLAVGFEEDVEVILE 1963
             TQQNALSRGVDVVVGTPGR+IDLIN N+LKLGEV+YLVLDEADQMLAVGFEEDVEVILE
Sbjct: 221  ATQQNALSRGVDVVVGTPGRLIDLINNNTLKLGEVEYLVLDEADQMLAVGFEEDVEVILE 280

Query: 1962 NLPPERQSMLFSATMPGWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYALQATGTSKR 1783
             LPP+RQSMLFSATMPGWVKKL+RKYLNNPLTIDLVGD++EKLAEGIKLYAL AT TSKR
Sbjct: 281  KLPPQRQSMLFSATMPGWVKKLSRKYLNNPLTIDLVGDQDEKLAEGIKLYALSATSTSKR 340

Query: 1782 TILSDLVTVYAKGGKTIVFTQTKRDADEVSLALTNIIASEALHGDISQHQRERTLNGFRQ 1603
            +IL DLVTVYAKGGKTIVFTQTKRDADEVS+AL+N I+SEALHGDISQHQRERTLNGFRQ
Sbjct: 341  SILGDLVTVYAKGGKTIVFTQTKRDADEVSMALSNSISSEALHGDISQHQRERTLNGFRQ 400

Query: 1602 GKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQ 1423
            GKFTVLVATDVA+RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG AILM+T SQ
Sbjct: 401  GKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGIAILMYTGSQ 460

Query: 1422 RRTVRSLERDVGCRFDFINPPSIEEVLGSSADQVVATLAGVHPESVQYFTPTAQKLMDEQ 1243
            RRTVRSLERDVGC+F+F++PPS++EVL SSA+ VVA L GVHPESV+YF PTAQ+LM++Q
Sbjct: 461  RRTVRSLERDVGCKFEFVSPPSVKEVLESSAEHVVAALTGVHPESVEYFIPTAQQLMEQQ 520

Query: 1242 GVDALAAALAQLSGFSRPPSSRSLITHEQGWVTLQLTRDSGYSRGFLSARSVTGFLSDVY 1063
            GV++LAAALA L GFS+PPSSRSLITHEQGW TLQLTRDS  SRGFLSARSVTGFLSDVY
Sbjct: 521  GVNSLAAALALLGGFSKPPSSRSLITHEQGWTTLQLTRDSENSRGFLSARSVTGFLSDVY 580

Query: 1062 SAAADEVGKIHIVADERVQGAVFDLPEEIAKELLDKQLPPGNTITKVSKLPALQDDGPAG 883
            S AADE+GKIH++ADERVQGA+FDLPEEIA +LL+++LPPGNTI+K++KLPALQDDGPAG
Sbjct: 581  SPAADEIGKIHLIADERVQGAIFDLPEEIAADLLNQELPPGNTISKITKLPALQDDGPAG 640

Query: 882  DFYGRFSNRD-RGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 706
            DFYGRFS+RD RG                                               
Sbjct: 641  DFYGRFSSRDTRGT---RGGFRDRRGRYSQGSSSGRFSDNDDDNWGNDSRSRGGRTRRGG 697

Query: 705  XDWLIN-DRRSSRS-SFGNRDSGFGGACFNCGRTGHRASECPTKQSY 571
             DWLI+ DRRSSRS S G+RD  FGGACFNCGR+GHRASECP K+ Y
Sbjct: 698  SDWLISGDRRSSRSLSGGSRDRSFGGACFNCGRSGHRASECPNKRDY 744


>ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Solanum lycopersicum]
          Length = 746

 Score = 1036 bits (2680), Expect = 0.0
 Identities = 554/768 (72%), Positives = 623/768 (81%), Gaps = 6/768 (0%)
 Frame = -2

Query: 2856 MACSSSIIGVSSIYQATPSSLELPKRPTSNSPLSLPFSDKSHFNGLKSSSSNTHSRFRQS 2677
            MA SSSIIGVSSIYQ  PS LEL +RPT+  PLSLPFS       ++ S+ + H R R+ 
Sbjct: 1    MASSSSIIGVSSIYQTNPS-LELSRRPTATPPLSLPFS-------IEKSNFHVHVRLRRP 52

Query: 2676 AACNGNSFVTSAVVTP-NSVLSEEAFKGFGGFDKDSLDVSENEYETEEDEVAGEIAVENK 2500
                   F+ SAVVTP +SVLSEEAFKG GGF KDSL+VSE+EY++E++    E    N+
Sbjct: 53   -------FLASAVVTPTSSVLSEEAFKGIGGFGKDSLNVSESEYDSEDEVEDNE---SNE 102

Query: 2499 NELVVSKLGLPQKLVESLEGRGITELFPIQRAVLTPALEGRDIIARAKTGTGKTLAFGIP 2320
            +EL VSKLGLP +LV++LE RGIT+LFPIQRAVL PALEGRDIIARAKTGTGKTLAFGIP
Sbjct: 103  DELSVSKLGLPHRLVDALEKRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIP 162

Query: 2319 IIKKLTEDXXXXXXXXXXXXXXXXXXXAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYI 2140
            ++KKL+ D                    PTRELA QVEKE+KESAPYLNTVC+YGGVSY 
Sbjct: 163  VLKKLSTDEEMRNTQRRGRLPKVLVLA-PTRELANQVEKEMKESAPYLNTVCIYGGVSYA 221

Query: 2139 TQQNALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADQMLAVGFEEDVEVILEN 1960
            TQQNALSRGVDVVVGTPGR+IDLIN N+LKLGEV+YLVLDEADQMLAVGFEEDVEVILE 
Sbjct: 222  TQQNALSRGVDVVVGTPGRLIDLINNNTLKLGEVEYLVLDEADQMLAVGFEEDVEVILEK 281

Query: 1959 LPPERQSMLFSATMPGWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYALQATGTSKRT 1780
            LPP+RQSMLFSATMPGWVKKL+RKYLNNPLTIDLVGD++EKLAEGIKLYAL AT TSKR+
Sbjct: 282  LPPQRQSMLFSATMPGWVKKLSRKYLNNPLTIDLVGDQDEKLAEGIKLYALSATSTSKRS 341

Query: 1779 ILSDLVTVYAKGGKTIVFTQTKRDADEVSLALTNIIASEALHGDISQHQRERTLNGFRQG 1600
            IL DLVTVYAKGGKTIVFTQTKRDADEVS+AL+N I+SEALHGDISQHQRERTLNGFRQG
Sbjct: 342  ILGDLVTVYAKGGKTIVFTQTKRDADEVSMALSNSISSEALHGDISQHQRERTLNGFRQG 401

Query: 1599 KFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQR 1420
            KFTVLVATDVA+RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG AILM+T SQR
Sbjct: 402  KFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGIAILMYTGSQR 461

Query: 1419 RTVRSLERDVGCRFDFINPPSIEEVLGSSADQVVATLAGVHPESVQYFTPTAQKLMDEQG 1240
            RTVRSLERDVGC+F+F++PPS++EVL SSA+ VVA L GVHPESV+YF PTAQ+LM++QG
Sbjct: 462  RTVRSLERDVGCKFEFVSPPSVKEVLESSAEHVVAALNGVHPESVEYFIPTAQQLMEQQG 521

Query: 1239 VDALAAALAQLSGFSRPPSSRSLITHEQGWVTLQLTRDSGYSRGFLSARSVTGFLSDVYS 1060
            V++LAAALA L GFS+PPSSRSLITHEQGW TLQLTRDS  SRGFLSARSVTGFLSDVYS
Sbjct: 522  VNSLAAALALLGGFSKPPSSRSLITHEQGWTTLQLTRDSETSRGFLSARSVTGFLSDVYS 581

Query: 1059 AAADEVGKIHIVADERVQGAVFDLPEEIAKELLDKQLPPGNTITKVSKLPALQDDGPAGD 880
             AADEVGKIH++ADERVQGA+FDLPEE A +LL+++LPPGNTI+K++KLPALQDDGPAGD
Sbjct: 582  PAADEVGKIHLIADERVQGAIFDLPEETAADLLNQELPPGNTISKITKLPALQDDGPAGD 641

Query: 879  FYGRFSNRD-RGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 703
            FYGRFS+RD RG                                                
Sbjct: 642  FYGRFSSRDTRGT---RGGLRDRRGRYSQGSSSGRYSDNDDDNWGNDSRSRGGRTRRGGS 698

Query: 702  DWLIN---DRRSSRS-SFGNRDSGFGGACFNCGRTGHRASECPTKQSY 571
            DWLI+   D+RSSRS S G+RD  FGGACFNCGR+GHRASECP K+ Y
Sbjct: 699  DWLISGDRDKRSSRSFSGGSRDRSFGGACFNCGRSGHRASECPNKRDY 746


>gb|EMJ09551.1| hypothetical protein PRUPE_ppa001778mg [Prunus persica]
          Length = 766

 Score = 1023 bits (2645), Expect = 0.0
 Identities = 553/781 (70%), Positives = 615/781 (78%), Gaps = 23/781 (2%)
 Frame = -2

Query: 2844 SSIIGVSSIYQATPSSLELPKRP----------TSNSPLSLPFSDKSHFNGLKSSSSNTH 2695
            +SIIGVSSIY  TP S EL +R           TS+  LSL F ++ HFN +  + S   
Sbjct: 2    TSIIGVSSIYPQTPCS-ELYRRAAASTTTTTATTSSPSLSLAFPERPHFNSVLRAKSGL- 59

Query: 2694 SRFRQSAACNGNSFVTSAVVTPNSVLSEEAFKGFGGFDKDSLDVSENEYETEEDEVAGEI 2515
               RQS      S V SA+ TPNSVLSEEAFKG GGF KDSLD S++EY++E +  +   
Sbjct: 60   --VRQS------SLVASAIATPNSVLSEEAFKGLGGFSKDSLD-SDSEYDSETEPAS--- 107

Query: 2514 AVENKNELVVSKLGLPQKLVESLEGRGITELFPIQRAVLTPALEGRDIIARAKTGTGKTL 2335
            A  + +EL +SKLGLPQ+LV+SLE RGI+ LFPIQRAVL PALEGRDIIARAKTGTGKTL
Sbjct: 108  AAGDDDELALSKLGLPQRLVDSLEKRGISSLFPIQRAVLVPALEGRDIIARAKTGTGKTL 167

Query: 2334 AFGIPIIKKLTEDXXXXXXXXXXXXXXXXXXXAPTRELAKQVEKEIKESAPYLNTVCVYG 2155
            AFGIPI+K+LTED                   APTRELAKQVEKEIKESAPYLNTVCVYG
Sbjct: 168  AFGIPILKRLTEDDEQRSSHRRTGYLPRVLVLAPTRELAKQVEKEIKESAPYLNTVCVYG 227

Query: 2154 GVSYITQQNALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADQMLAVGFEEDVE 1975
            GVSYITQQ+ALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEAD MLAVGFEEDVE
Sbjct: 228  GVSYITQQSALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADSMLAVGFEEDVE 287

Query: 1974 VILENLPPERQSMLFSATMPGWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYALQATG 1795
            VIL+ LP +RQSMLFSATMP WVKKLARKYL+NPLTIDLVGD+EEKLAEGIKLYAL  TG
Sbjct: 288  VILQKLPTQRQSMLFSATMPAWVKKLARKYLDNPLTIDLVGDQEEKLAEGIKLYALSTTG 347

Query: 1794 TSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSLALTNIIASEALHGDISQHQRERTLN 1615
            +SKRTILSDL+TVYAKGGKTIVFTQTKRDADEVS++LT  IASEALHGDISQHQRERTLN
Sbjct: 348  SSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSMSLTTSIASEALHGDISQHQRERTLN 407

Query: 1614 GFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMF 1435
            GFRQGKFTVLVATDVA+RGLDIPNVDLVIHYELPND ETFVHRSGRTGRAGK+G+A+LMF
Sbjct: 408  GFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDSETFVHRSGRTGRAGKQGTAVLMF 467

Query: 1434 TSSQRRTVRSLERDVGCRFDFINPPSIEEVLGSSADQVVATLAGVHPESVQYFTPTAQKL 1255
            T++QRRTVR+LERDVGC+F+F++PP+IEEVL SSA  VVATL+GVHPESVQ+FTPTAQKL
Sbjct: 468  TNNQRRTVRTLERDVGCKFEFVSPPTIEEVLESSAQHVVATLSGVHPESVQFFTPTAQKL 527

Query: 1254 MDEQGVDALAAALAQLSGFSRPPSSRSLITHEQGWVTLQLTRDSGYSRGFLSARSVTGFL 1075
            +DEQG +ALAAALAQLSGFSRPPSSRSLITHEQGW TLQ+ RD  ++RGFLSARSVTGFL
Sbjct: 528  IDEQGTNALAAALAQLSGFSRPPSSRSLITHEQGWTTLQIIRDPAFARGFLSARSVTGFL 587

Query: 1074 SDVYSAAADEVGKIHIVADERVQGAVFDLPEEIAKELLDKQLPPGNTITKVSKLPALQDD 895
            SDVYSAAADEVGKIHI+ADERVQGAVFDLPEEIAKELL++Q+PPGNTI+K++KLPALQDD
Sbjct: 588  SDVYSAAADEVGKIHIIADERVQGAVFDLPEEIAKELLNRQIPPGNTISKINKLPALQDD 647

Query: 894  GPAGDFYG----------RFSNRDR---GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 754
            GP  D+YG          R  +RDR                                   
Sbjct: 648  GPVNDYYGRFSGRDRNSRRGGSRDRQGSSGFRSSRGWGSSDGADDSFRSGGRGGGRGGGR 707

Query: 753  XXXXXXXXXXXXXXXXXDWLINDRRSSRSSFGNRDSGFGGACFNCGRTGHRASECPTKQS 574
                             DWLI  R SSRSS  +RD  FGG+CFNCGR+GHRASECPTKQ 
Sbjct: 708  SFGNSNSQSRTSRSTDDDWLIGGRPSSRSS--SRDRSFGGSCFNCGRSGHRASECPTKQG 765

Query: 573  Y 571
            Y
Sbjct: 766  Y 766


>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
            [Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed
            protein product [Vitis vinifera]
          Length = 764

 Score = 1021 bits (2641), Expect = 0.0
 Identities = 552/769 (71%), Positives = 617/769 (80%), Gaps = 10/769 (1%)
 Frame = -2

Query: 2847 SSSIIGVSSIYQATPSSLELPKRPTSNSPLSLPFSDKSHFNGLKSSSSNTHS--RFRQSA 2674
            +SSIIGVSS+YQ T  +LEL +R +++S LSLPFSDK+H    K+ ++   S    R+S 
Sbjct: 2    ASSIIGVSSVYQTT--ALELSRRTSAHS-LSLPFSDKTHLGVFKAPNTRVLSDASLRRSF 58

Query: 2673 ACNGNSFVTSAVVTPNSVLSEEAFKGFGGFDKDSLDVSENEYETEEDEVAGEIAVENKNE 2494
               G SFV SA+ TPNSVLSEEAFKG GGF KD LDV++ + + + +  A   A E+  E
Sbjct: 59   K-QGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAAQED--E 115

Query: 2493 LVVSKLGLPQKLVESLEGRGITELFPIQRAVLTPALEGRDIIARAKTGTGKTLAFGIPII 2314
            L +++LGLP +LVESLE RGIT LFPIQRAVL PALEGRD+IARAKTGTGKTLAFGIPII
Sbjct: 116  LALAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPII 175

Query: 2313 KKLTEDXXXXXXXXXXXXXXXXXXXAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQ 2134
            K+L+ED                   APTRELAKQVEKEIKESAPYL+TVCVYGGVSYITQ
Sbjct: 176  KRLSEDDEKRTSQRRSGRLPRVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYITQ 235

Query: 2133 QNALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADQMLAVGFEEDVEVILENLP 1954
            QNALSRGVDVVVGTPGRIIDLI GNSLKLGEVQ LVLDEADQMLAVGFEEDVEVILE LP
Sbjct: 236  QNALSRGVDVVVGTPGRIIDLIKGNSLKLGEVQNLVLDEADQMLAVGFEEDVEVILEKLP 295

Query: 1953 PERQSMLFSATMPGWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYALQATGTSKRTIL 1774
             ERQSMLFSATMP WVKKLARKYL+NPLTIDLVGD +EKLAEGIKLYA+  T TSKRTIL
Sbjct: 296  SERQSMLFSATMPAWVKKLARKYLDNPLTIDLVGDHDEKLAEGIKLYAIPTTATSKRTIL 355

Query: 1773 SDLVTVYAKGGKTIVFTQTKRDADEVSLALTNIIASEALHGDISQHQRERTLNGFRQGKF 1594
            SDL+TVYAKGGKTIVFTQTKRDADEVS+ALTN IASEALHGDISQHQRERTLNGFRQGKF
Sbjct: 356  SDLITVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNGFRQGKF 415

Query: 1593 TVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRT 1414
            TVLVATDVAARGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG+AILMFTSSQRRT
Sbjct: 416  TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRT 475

Query: 1413 VRSLERDVGCRFDFINPPSIEEVLGSSADQVVATLAGVHPESVQYFTPTAQKLMDEQGVD 1234
            V+SLERDVGC+F+FI+PP+IEEVL SSA+QVVATL GVHPESV++FTPTAQKL++E+G  
Sbjct: 476  VKSLERDVGCKFEFISPPAIEEVLESSAEQVVATLNGVHPESVEFFTPTAQKLIEEKGTG 535

Query: 1233 ALAAALAQLSGFSRPPSSRSLITHEQGWVTLQLTRDSGYSRGFLSARSVTGFLSDVYSAA 1054
            ALAAALA LSGFS+PPS RSLI+HEQGWVTLQLTRDSGYSRGFLSARSVTGFLSDVY  A
Sbjct: 536  ALAAALAHLSGFSQPPSFRSLISHEQGWVTLQLTRDSGYSRGFLSARSVTGFLSDVYPTA 595

Query: 1053 ADEVGKIHIVADERVQGAVFDLPEEIAKELLDKQLPPGNTITKVSKLPALQDDGPA---- 886
            ADE+GKI++VADERVQGAVFDLPEEIAKELL+KQ+PPGNTI+K++KLPALQDDGPA    
Sbjct: 596  ADELGKIYLVADERVQGAVFDLPEEIAKELLNKQMPPGNTISKITKLPALQDDGPAGDYY 655

Query: 885  GDFYGRFSNRDRGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 706
            G F  R  +   G+                                              
Sbjct: 656  GRFSNRDRSSRGGSRERRGSRISRGRGSSWGSDDDGGDDLNRRGGRSFRSNNNWSRNLRT 715

Query: 705  XD--WLINDRRSSRSS--FGNRDSGFGGACFNCGRTGHRASECPTKQSY 571
             +  WLI  RRS+RSS  FG+R+  FGG+CF CGR+GHRASECP K+ Y
Sbjct: 716  SEDDWLIGGRRSNRSSSSFGSRERSFGGSCFTCGRSGHRASECPNKRDY 764


>gb|EXB57576.1| DEAD-box ATP-dependent RNA helicase 3 [Morus notabilis]
          Length = 810

 Score = 1008 bits (2605), Expect = 0.0
 Identities = 553/788 (70%), Positives = 614/788 (77%), Gaps = 33/788 (4%)
 Frame = -2

Query: 2844 SSIIGVSSIYQATPSSLELPKR--PTSNSPLSLPFSDKSHFNGLKSSSSNTHSRFRQSAA 2671
            +SIIGVSSIYQ TPS LE  +R    ++SP SLPF DKSHFN +         R     +
Sbjct: 2    ASIIGVSSIYQ-TPS-LEPYRRVAAATSSPSSLPFPDKSHFNSVL--------RAYNCKS 51

Query: 2670 CNGNSFVTSAVVTPNSVLSEEAFKGFGGFDKDSLDVSE-NEYETEEDEVAGEIAVENKNE 2494
             + +  V SA+ TPNSVLSEEAFKG G F KDS    E ++YE+EE E  GE +V++ +E
Sbjct: 52   GSSSRLVASAIATPNSVLSEEAFKGLGDFSKDSFSGDEEDDYESEEGE-PGEASVDD-DE 109

Query: 2493 LVVSKLGLPQKLVESLEGRGITELFPIQRAVLTPALEGRDIIARAKTGTGKTLAFGIPII 2314
            L +SKLGLPQ+LV+SLE RGIT LFPIQRAVL PALEGRD+IARAKTGTGKTLAFGIPII
Sbjct: 110  LAISKLGLPQRLVDSLEKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPII 169

Query: 2313 KKLTEDXXXXXXXXXXXXXXXXXXXAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQ 2134
            K+LTED                   APTRELAKQVEKEIKESAP+LNTVCVYGGVSYITQ
Sbjct: 170  KRLTEDDEQRGSRRRSSRLPKGLVLAPTRELAKQVEKEIKESAPHLNTVCVYGGVSYITQ 229

Query: 2133 QNALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADQMLAVGFEEDVEVILENLP 1954
            QNALSRGVDVVVGTPGR+IDLING SL+LGEVQYLVLDEADQMLAVGFEEDVEVILE LP
Sbjct: 230  QNALSRGVDVVVGTPGRLIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVEVILEKLP 289

Query: 1953 PERQSMLFSATMPGWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYALQATGTSKRTIL 1774
             ERQSMLFSATMP WVKKLARKYL+NPLTIDLVG+ +EKLAEGIKLYA+  T TSKRTIL
Sbjct: 290  SERQSMLFSATMPSWVKKLARKYLDNPLTIDLVGERDEKLAEGIKLYAISTTATSKRTIL 349

Query: 1773 SDLVTVYAKGGKTIVFTQTKRDADEVSLALTNIIASEALHGDISQHQRERTLNGFRQGKF 1594
            SDLVTVYAKGGKTIVFTQTKRDADEVS+ALTN IASEALHGDISQHQRERTLNGFRQGKF
Sbjct: 350  SDLVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNGFRQGKF 409

Query: 1593 TVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRT 1414
            TVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILMFTSSQRRT
Sbjct: 410  TVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRT 469

Query: 1413 VRSLERDVGCRFDFINPPSIEEVLGSSADQVVATLAGVHPESVQYFTPTAQKLMDEQGVD 1234
            VRSLERDVGC+F+F++PPSIEEVL SSA+ VVATL+GVH ESV++FTPTAQKL++EQG  
Sbjct: 470  VRSLERDVGCKFEFVSPPSIEEVLESSAEHVVATLSGVHAESVEFFTPTAQKLIEEQGTS 529

Query: 1233 ALAAALAQLSGFSRPPSSRSLITHEQGWVTLQLTRDSGYSRGFLSARSVTGFLSDVYSAA 1054
            ALAAALAQLSGF+RPPSSRSLI HEQG VTLQL RD  +SRGFLSARSVTGFLSDVYSAA
Sbjct: 530  ALAAALAQLSGFARPPSSRSLINHEQGLVTLQLIRDPAFSRGFLSARSVTGFLSDVYSAA 589

Query: 1053 ADEVGKIHIVADERVQGAVFDLPEEIAKELLDKQLPPGNTITKVSKLPALQDDGPAGDFY 874
            ADE+GK+++VADERVQ AVFDLPEEIAKELL+++LP GNTI+K++KLP LQDDGPA D+Y
Sbjct: 590  ADELGKVYLVADERVQSAVFDLPEEIAKELLNRELPSGNTISKITKLPPLQDDGPASDYY 649

Query: 873  GRFSNRD--------RGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 718
            GRFS+R+        RG+                                          
Sbjct: 650  GRFSSREHGGDRGSRRGSRGRGGFRGSRGRGGGFSDDEDDVFRSSGRSSRKPNNSWSRGS 709

Query: 717  XXXXXDWLINDRRSS-RSS---------------------FGNRDSGFGGACFNCGRTGH 604
                 DWLI  R+S+ RSS                       +RD  FGG+CFNCGR+GH
Sbjct: 710  RSSSDDWLIGGRKSTPRSSSDDWLIGGRKSGSSWSQGSSRSSSRDRSFGGSCFNCGRSGH 769

Query: 603  RASECPTK 580
            RASECP K
Sbjct: 770  RASECPDK 777


>ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223548563|gb|EEF50054.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 772

 Score = 1007 bits (2604), Expect = 0.0
 Identities = 542/781 (69%), Positives = 610/781 (78%), Gaps = 22/781 (2%)
 Frame = -2

Query: 2847 SSSIIGVSSIYQATPSSLELPKRPTSNSPLSLPFSDKSHFNGLKSSSSNTHSRFRQSAAC 2668
            +SS++GVSSI+  TPS +EL  R T+++ LS+P +DK HFN L   S + ++  +     
Sbjct: 3    TSSVLGVSSIFH-TPS-VELSSRKTNSTTLSIPTTDKPHFNSLVLQSCSLYNN-KHGHGH 59

Query: 2667 NGNSFVTSAVVTPNSVLSEEAFKGFGGF------DKDSLDVSENEYETEEDEVAGEIAVE 2506
              +SFVTSA+  PNS+LSEEAFKG GG       D+D+ DVS   YE   D+ AGE ++ 
Sbjct: 60   GHSSFVTSAIAAPNSILSEEAFKGLGGRLSDFDEDEDNDDVSSGGYE---DDGAGE-SLP 115

Query: 2505 NKNELVVSKLGLPQKLVESLEGRGITELFPIQRAVLTPALEGRDIIARAKTGTGKTLAFG 2326
            + +EL +SKLGLPQ+LVESLE RGIT LFPIQRAVL PALEGRD+IARAKTGTGKTLAFG
Sbjct: 116  DDDELAISKLGLPQRLVESLEKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFG 175

Query: 2325 IPIIKKLTEDXXXXXXXXXXXXXXXXXXXAPTRELAKQVEKEIKESAPYLNTVCVYGGVS 2146
            IPIIK +TED                    PTRELAKQVEKEI ESAPYL+TVCVYGGVS
Sbjct: 176  IPIIKCITEDDKSSQRRTGRLPRVLVLA--PTRELAKQVEKEINESAPYLSTVCVYGGVS 233

Query: 2145 YITQQNALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADQMLAVGFEEDVEVIL 1966
            YITQ+NALSRGVDVVVGTPGRIIDLIN  SLKLGEV+YLVLDEADQML+ GFEEDVEVIL
Sbjct: 234  YITQRNALSRGVDVVVGTPGRIIDLINSGSLKLGEVEYLVLDEADQMLSFGFEEDVEVIL 293

Query: 1965 ENLPPERQSMLFSATMPGWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYALQATGTSK 1786
            ENLP +RQSMLFSATMP WVKKLARKYL+NPL IDLVGD+EEKLAEGIKLYA+    TSK
Sbjct: 294  ENLPSKRQSMLFSATMPTWVKKLARKYLDNPLQIDLVGDQEEKLAEGIKLYAISTNATSK 353

Query: 1785 RTILSDLVTVYAKGGKTIVFTQTKRDADEVSLALTNIIASEALHGDISQHQRERTLNGFR 1606
            R+ILSDLVTVYAKGGKTI+FTQTKRDADEVS+ LTN IASEALHGDISQHQRERTLNGFR
Sbjct: 354  RSILSDLVTVYAKGGKTIIFTQTKRDADEVSMVLTNSIASEALHGDISQHQRERTLNGFR 413

Query: 1605 QGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSS 1426
            QGKFTVLVATDVA+RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+A+LMFTSS
Sbjct: 414  QGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAVLMFTSS 473

Query: 1425 QRRTVRSLERDVGCRFDFINPPSIEEVLGSSADQVVATLAGVHPESVQYFTPTAQKLMDE 1246
            QRRTV+SLERDVGCRF+F++PP  EEVL SSA+QV+ATL+GVHPESV +FTPTAQ+L++E
Sbjct: 474  QRRTVKSLERDVGCRFEFVSPPGTEEVLESSAEQVIATLSGVHPESVGFFTPTAQRLIEE 533

Query: 1245 QGVDALAAALAQLSGFSRPPSSRSLITHEQGWVTLQLTRDSGYSRGFLSARSVTGFLSDV 1066
            QG  ALAAALAQLSGFS+PPSSRSLI+HEQGW TLQLTRD  YSRGFLSARSVTGFLSDV
Sbjct: 534  QGTSALAAALAQLSGFSQPPSSRSLISHEQGWTTLQLTRDPSYSRGFLSARSVTGFLSDV 593

Query: 1065 YSAAADEVGKIHIVADERVQGAVFDLPEEIAKELLDKQLPPGNTITKVSKLPALQDDGPA 886
            Y+AAADEVGKIHI+ADE+VQGAVFDLPEEIAKELL+KQLPPGNTI+K++KLP+LQDDGP 
Sbjct: 594  YTAAADEVGKIHIIADEKVQGAVFDLPEEIAKELLNKQLPPGNTISKITKLPSLQDDGPP 653

Query: 885  GDFYGRFSNRDRGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 706
             DFYGRFS+RDR                                                
Sbjct: 654  SDFYGRFSSRDR--PPRGGGRGQRGSRSSQGWGGGRGGRNSDDDDDTFRRGGRSFSRSSS 711

Query: 705  XDWLINDRRSSRSS----------------FGNRDSGFGGACFNCGRTGHRASECPTKQS 574
             DWLI   RSSR S                   RD  FGG+CFNCGR+GHRAS+CP K  
Sbjct: 712  DDWLIGGGRSSRPSPRGRSSPRDWSSPRDRSSPRDRSFGGSCFNCGRSGHRASDCPNKLD 771

Query: 573  Y 571
            +
Sbjct: 772  F 772


>ref|XP_002330044.1| predicted protein [Populus trichocarpa]
            gi|566168507|ref|XP_006382239.1| hypothetical protein
            POPTR_0005s00240g [Populus trichocarpa]
            gi|550337590|gb|ERP60036.1| hypothetical protein
            POPTR_0005s00240g [Populus trichocarpa]
          Length = 775

 Score =  996 bits (2576), Expect = 0.0
 Identities = 533/783 (68%), Positives = 607/783 (77%), Gaps = 21/783 (2%)
 Frame = -2

Query: 2856 MACSSSIIGVSSIYQATPSSLELPKRPTSNSPLSLPFSDKS----------HFNGLKSSS 2707
            MA + ++IGVSS++ +T ++       T++S  ++P+   S          HFN L    
Sbjct: 1    MASTCTVIGVSSLFPSTTTNSCRRATTTTHSSPAIPYPSSSSAPFLSERPPHFNSL---I 57

Query: 2706 SNTHSRFRQSAACNGNSFV---TSAVVTPNSVLSEEAFKGFGGFDKDSLDV----SENEY 2548
            + T   F+ S   N +S      SA+ +PNS+LSEEAFKG  GF     DV    ++ +Y
Sbjct: 58   AKTQLSFKHSLIINNSSSSFSPPSAIASPNSILSEEAFKGLDGFSDFEADVDAGGADVDY 117

Query: 2547 ETEEDEVAGEIAVENKNELVVSKLGLPQKLVESLEGRGITELFPIQRAVLTPALEGRDII 2368
             + E E +   +   ++EL VSKLGLP +LV++L+ RGIT LFPIQRAVL PALEGRD+I
Sbjct: 118  ASSETEPSSNTS---EDELDVSKLGLPHRLVQTLQNRGITHLFPIQRAVLIPALEGRDLI 174

Query: 2367 ARAKTGTGKTLAFGIPIIKKLTEDXXXXXXXXXXXXXXXXXXXAPTRELAKQVEKEIKES 2188
            ARAKTGTGKTLAFGIPIIK+LTED                   APTRELAKQVEKEIKES
Sbjct: 175  ARAKTGTGKTLAFGIPIIKRLTEDAELRGSQRRTGRLPKVLVLAPTRELAKQVEKEIKES 234

Query: 2187 APYLNTVCVYGGVSYITQQNALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADQ 2008
            APYL++VCVYGGVSY+TQQ+ALSRGVDVVVGTPGRIIDL+ GNSLKLGEV+YLVLDEADQ
Sbjct: 235  APYLSSVCVYGGVSYVTQQSALSRGVDVVVGTPGRIIDLLKGNSLKLGEVEYLVLDEADQ 294

Query: 2007 MLAVGFEEDVEVILENLPPERQSMLFSATMPGWVKKLARKYLNNPLTIDLVGDEEEKLAE 1828
            ML+ GFEEDVEVILENLP +RQSMLFSATMP WVKKLARKYL+NPL IDLVGD+EEKLAE
Sbjct: 295  MLSFGFEEDVEVILENLPSKRQSMLFSATMPTWVKKLARKYLDNPLQIDLVGDQEEKLAE 354

Query: 1827 GIKLYALQATGTSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSLALTNIIASEALHGD 1648
            GIKLYAL AT  SKRTILSDLVTVYAKGGKTI+FTQTKRDADEVS+ALTN IASEALHGD
Sbjct: 355  GIKLYALSATAASKRTILSDLVTVYAKGGKTIIFTQTKRDADEVSMALTNTIASEALHGD 414

Query: 1647 ISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGR 1468
            ISQHQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPND ETFVHRSGRTGR
Sbjct: 415  ISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRSGRTGR 474

Query: 1467 AGKEGSAILMFTSSQRRTVRSLERDVGCRFDFINPPSIEEVLGSSADQVVATLAGVHPES 1288
            AGKEG+AILMFTSSQRRTVRSLERD GC+F+F++PP+IEEVL SSA+QVVATL+GVHPES
Sbjct: 475  AGKEGTAILMFTSSQRRTVRSLERDAGCKFEFVSPPAIEEVLESSAEQVVATLSGVHPES 534

Query: 1287 VQYFTPTAQKLMDEQGVDALAAALAQLSGFSRPPSSRSLITHEQGWVTLQLTRDSGYSRG 1108
            V++FTPTAQKL++EQG +ALAAALA LSGFS+PPSSRSLI+H QGW TLQLTRD  YSRG
Sbjct: 535  VEFFTPTAQKLIEEQGTNALAAALAHLSGFSQPPSSRSLISHAQGWATLQLTRDPTYSRG 594

Query: 1107 FLSARSVTGFLSDVYSAAADEVGKIHIVADERVQGAVFDLPEEIAKELLDKQLPPGNTIT 928
            FLSARSVTGFLSDVY AAADEVGKIH++ADERVQGAVFDLPEEIAKELL+KQ+PPGNTI 
Sbjct: 595  FLSARSVTGFLSDVYPAAADEVGKIHVIADERVQGAVFDLPEEIAKELLNKQIPPGNTIA 654

Query: 927  KVSKLPALQDDGPAGDFYGRFSNRDR----GAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 760
            K++KLPALQDDGP GDFYGRFS+RDR    G                             
Sbjct: 655  KITKLPALQDDGPPGDFYGRFSSRDRPARGGPRGQRGGFRSSRGRGSGRDSDDGGTYRRG 714

Query: 759  XXXXXXXXXXXXXXXXXXXDWLINDRRSSRSSFGNRDSGFGGACFNCGRTGHRASECPTK 580
                               DWLI  RRSSR    +RD  FGG+CFNCGR+GHRASECP K
Sbjct: 715  GRSNSNENSWSQMSRSSGDDWLIGGRRSSRPP--SRDRSFGGSCFNCGRSGHRASECPNK 772

Query: 579  QSY 571
            + +
Sbjct: 773  KDF 775


>ref|XP_006382233.1| hypothetical protein POPTR_0005s00200g [Populus trichocarpa]
            gi|550337584|gb|ERP60030.1| hypothetical protein
            POPTR_0005s00200g [Populus trichocarpa]
          Length = 773

 Score =  985 bits (2546), Expect = 0.0
 Identities = 531/780 (68%), Positives = 595/780 (76%), Gaps = 23/780 (2%)
 Frame = -2

Query: 2856 MACSSSIIGVSSIYQA-------------TPSSLELPKR-PTSNSPLSLPFSDKSHFNGL 2719
            MA +S++IGVSSI+ +             T ++  L    P S+S  S       HFN L
Sbjct: 1    MASTSTVIGVSSIFHSKTTTSCRRAAAATTTTAANLSSAMPLSSSSASFLSEKPPHFNSL 60

Query: 2718 KSSSSNTHSRFRQSAACNGNSFVT--SAVVTPNSVLSEEAFKGFGGFDKDSLDVSENE-- 2551
                + T   F+ S   N NS  T  SA+ TPN +LSEEAFKG  GF     D   ++  
Sbjct: 61   ---IAKTQLSFKHSLIINTNSTFTPPSAIATPNPILSEEAFKGLDGFSDFEADADTDDAV 117

Query: 2550 -YETEEDEVAGEIAVENKNELVVSKLGLPQKLVESLEGRGITELFPIQRAVLTPALEGRD 2374
             Y++ E E     +   ++EL +SKLGLPQ+LV++L+ RGIT LFPIQRAVL P LEGRD
Sbjct: 118  DYDSSETEPNSNTS---EDELDISKLGLPQRLVQTLQNRGITHLFPIQRAVLIPTLEGRD 174

Query: 2373 IIARAKTGTGKTLAFGIPIIKKLTEDXXXXXXXXXXXXXXXXXXXAPTRELAKQVEKEIK 2194
            +IARAKTGTGKTLAFGIPIIK+LTED                   APTRELAKQVEKEIK
Sbjct: 175  LIARAKTGTGKTLAFGIPIIKRLTEDAELRGSQRRTGRLPKVLVLAPTRELAKQVEKEIK 234

Query: 2193 ESAPYLNTVCVYGGVSYITQQNALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEA 2014
            ESAPYL+TVCVYGGVSY TQQNALSRGVDVVVGTPGRIIDL+ GNSLKLGEV+YLVLDEA
Sbjct: 235  ESAPYLSTVCVYGGVSYATQQNALSRGVDVVVGTPGRIIDLLKGNSLKLGEVEYLVLDEA 294

Query: 2013 DQMLAVGFEEDVEVILENLPPERQSMLFSATMPGWVKKLARKYLNNPLTIDLVGDEEEKL 1834
            DQML+ GFEEDVEVILE+LP +RQSMLFSATMP WVKKLARKYL+NPL IDLVGD EEKL
Sbjct: 295  DQMLSFGFEEDVEVILESLPSKRQSMLFSATMPTWVKKLARKYLDNPLQIDLVGDREEKL 354

Query: 1833 AEGIKLYALQATGTSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSLALTNIIASEALH 1654
            AEGIKLYA+  T TSKRTILSDLVTVYAKG KTI+FT+TKRDADEVS+ALT  IASEALH
Sbjct: 355  AEGIKLYAISTTATSKRTILSDLVTVYAKGEKTIIFTRTKRDADEVSMALTQSIASEALH 414

Query: 1653 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRT 1474
            GDISQHQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRT
Sbjct: 415  GDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRT 474

Query: 1473 GRAGKEGSAILMFTSSQRRTVRSLERDVGCRFDFINPPSIEEVLGSSADQVVATLAGVHP 1294
            GRAGKEG+AILMFT+SQRRTVRSLERD GC+F+F++PP+IEE+L SS +QVVATL GVHP
Sbjct: 475  GRAGKEGTAILMFTNSQRRTVRSLERDAGCKFEFVSPPAIEELLESSTEQVVATLNGVHP 534

Query: 1293 ESVQYFTPTAQKLMDEQGVDALAAALAQLSGFSRPPSSRSLITHEQGWVTLQLTRDSGYS 1114
            ESV++FTPTAQKL++EQG  ALAAALA LSGFSRPPSSRSLI+HEQGW TLQLTRD  YS
Sbjct: 535  ESVEFFTPTAQKLIEEQGTSALAAALAHLSGFSRPPSSRSLISHEQGWTTLQLTRDPTYS 594

Query: 1113 RGFLSARSVTGFLSDVYSAAADEVGKIHIVADERVQGAVFDLPEEIAKELLDKQLPPGNT 934
            RGFLSARSVTGFLSDVY AAADE+GKIH++ADERVQGAVFDLPEEIAKELL+KQLPPGNT
Sbjct: 595  RGFLSARSVTGFLSDVYPAAADEIGKIHLIADERVQGAVFDLPEEIAKELLNKQLPPGNT 654

Query: 933  ITKVSKLPALQDDGPAGDFYGRFSNRDR----GAXXXXXXXXXXXXXXXXXXXXXXXXXX 766
            I K++KLPALQDDGP  DFYGRFS+RDR    G                           
Sbjct: 655  IEKITKLPALQDDGPPSDFYGRFSSRDRPARGGPRGQRGGFRSSRGQGSGRYSDDEGTNR 714

Query: 765  XXXXXXXXXXXXXXXXXXXXXDWLINDRRSSRSSFGNRDSGFGGACFNCGRTGHRASECP 586
                                 DWL+  RRSSR S  +RD  FGG+CFNCGR+GHRASECP
Sbjct: 715  RGGRSNSNENTRSWMSRSSGDDWLVGGRRSSRPS--SRDRSFGGSCFNCGRSGHRASECP 772


>ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X3 [Citrus sinensis]
          Length = 766

 Score =  983 bits (2540), Expect = 0.0
 Identities = 530/774 (68%), Positives = 601/774 (77%), Gaps = 20/774 (2%)
 Frame = -2

Query: 2847 SSSIIGVSSI-YQATPSSLELPKRPTSNSPLSLPFSDKSHFNGLKSSSSNTHSRFRQSAA 2671
            SS+++GVSS  Y    S    P   TS++ LSLP +DKSHFN L ++SS       ++  
Sbjct: 3    SSTVLGVSSTPYLEVSSKRTTPPATTSSALLSLPLADKSHFNALIATSSVAKPLGFRNGG 62

Query: 2670 CNGN------SFVTSAVVTPNSVLSEEAFKGFGGFDKDS--LD--VSENEYETEEDEVAG 2521
             +G       +FV SA+ TPN+VLSEEAFK  G F ++S  LD  VS+ +YE++      
Sbjct: 63   GSGFGFKQSLTFVPSAIATPNTVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQ------ 116

Query: 2520 EIAVENKNELVVSKLGLPQKLVESLEGRGITELFPIQRAVLTPALEGRDIIARAKTGTGK 2341
               V +++EL +SKLGLP +L ESLE RGIT LFPIQRAV  PAL+GRD+IARAKTGTGK
Sbjct: 117  --TVSDEDELAISKLGLPGRLAESLEKRGITHLFPIQRAVFEPALQGRDLIARAKTGTGK 174

Query: 2340 TLAFGIPIIKKLTEDXXXXXXXXXXXXXXXXXXXAPTRELAKQVEKEIKESAPYLNTVCV 2161
            TLAFGIPI+K+LTE                     PTRELA+QVEKEIKESAPYLNTVCV
Sbjct: 175  TLAFGIPILKRLTEGYEQAISLRRSRLPKVLVLA-PTRELARQVEKEIKESAPYLNTVCV 233

Query: 2160 YGGVSYITQQNALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADQMLAVGFEED 1981
            YGGVSY TQQNALSRGVDVVVGTPGRIIDLIN +SLKLGEV+YLVLDEADQMLAVGFEED
Sbjct: 234  YGGVSYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEADQMLAVGFEED 293

Query: 1980 VEVILENLPPERQSMLFSATMPGWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYALQA 1801
            VE+ILENLPP+RQSMLFSATMP WVKKL+RKYL+NPL IDLVG+++EKLAEGIKLYA+  
Sbjct: 294  VELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAIST 353

Query: 1800 TGTSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSLALTNIIASEALHGDISQHQRERT 1621
            T TSKRTILSDL+TVYAKGGKTIVFTQTKRDADEVSLALT+IIASEALHGDISQHQRERT
Sbjct: 354  TATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERT 413

Query: 1620 LNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAIL 1441
            LNGFRQGKFTVLVATDVAARGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG+AIL
Sbjct: 414  LNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAIL 473

Query: 1440 MFTSSQRRTVRSLERDVGCRFDFINPPSIEEVLGSSADQVVATLAGVHPESVQYFTPTAQ 1261
            MFTSSQRRTVRSLERDVGC+F+F++PP +E+VL SSA+QVVATL GVHPESV++FTPTAQ
Sbjct: 474  MFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQ 533

Query: 1260 KLMDEQGVDALAAALAQLSGFSRPPSSRSLITHEQGWVTLQLTRDSGYSRGFLSARSVTG 1081
            +L++E+G DALAAALAQLSGFSRPPSSRSLI HEQGWVTLQLTRDS +SRGF+SARSV G
Sbjct: 534  RLIEEKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMG 593

Query: 1080 FLSDVYSAAADEVGKIHIVADERVQGAVFDLPEEIAKELLDKQLPPGNTITKVSKLPALQ 901
            FLSDVY  AADE+GKIHI+AD+RVQGAVFDLPEEIAKELL+KQ+PPGNTI+K++KLP LQ
Sbjct: 594  FLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKITKLPVLQ 653

Query: 900  DDGPA---------GDFYGRFSNRDRGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 748
            DDGP+         GD + R                                        
Sbjct: 654  DDGPSSDNYGRFSSGDRFSRGGGSRFSRGGARGGGFRSSRSWGSDDEDGFSSSRGGRSFR 713

Query: 747  XXXXXXXXXXXXXXXDWLINDRRSSRSSFGNRDSGFGGACFNCGRTGHRASECP 586
                           DWLI   RSSRSS  +RD  FGGACFNCGR+GHRASECP
Sbjct: 714  SGNNQGSRFSTSSDDDWLIGGSRSSRSS--SRDRSFGGACFNCGRSGHRASECP 765


>ref|XP_006841548.1| hypothetical protein AMTR_s00003p00168720 [Amborella trichopoda]
            gi|548843569|gb|ERN03223.1| hypothetical protein
            AMTR_s00003p00168720 [Amborella trichopoda]
          Length = 768

 Score =  983 bits (2540), Expect = 0.0
 Identities = 529/779 (67%), Positives = 594/779 (76%), Gaps = 21/779 (2%)
 Frame = -2

Query: 2844 SSIIGVSSIYQATPSSLELPKRPTSNSPL-----SLPFSDKSHFNGLKSSSSNTHSRFRQ 2680
            +SIIGVSS+YQ    SLEL +R +S  P      S   S+K  F  L SS    +  F  
Sbjct: 2    ASIIGVSSLYQTL--SLELSRRASSQLPSLSSAPSYSSSEKPQFRSL-SSPKPLNKSFEA 58

Query: 2679 SAACNGNS---------FVTSAVVTPNSVLSEEAFKGFGGFDKDS--LDVSENEYETEED 2533
            S + NG+S          +  A+ TPNSVLSEEAFKG GG  K     D  E++YE E  
Sbjct: 59   SCSLNGDSSAKRHGFKGLIPCAIATPNSVLSEEAFKGLGGLSKGRGFKDDGEDDYELEVG 118

Query: 2532 EVAGEIAVENKNELVVSKLGLPQKLVESLEGRGITELFPIQRAVLTPALEGRDIIARAKT 2353
              A      N+  L +  LGL ++LV++L  RGIT LFPIQRAVL PALEGRDII RAKT
Sbjct: 119  SEAS-----NEENLAIGNLGLREELVDALAKRGITHLFPIQRAVLVPALEGRDIIGRAKT 173

Query: 2352 GTGKTLAFGIPIIKKLTEDXXXXXXXXXXXXXXXXXXXAPTRELAKQVEKEIKESAPYLN 2173
            GTGKTLAF IPIIK+L ++                    PTRELAKQVEKEIKESAPYL+
Sbjct: 174  GTGKTLAFAIPIIKRLDDEGRSPSRGRLPRVLVLA----PTRELAKQVEKEIKESAPYLS 229

Query: 2172 TVCVYGGVSYITQQNALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADQMLAVG 1993
            TVCVYGGVSY  QQNAL+RGVDVVVGTPGRIIDL+NGNSL+LGEVQYLVLDEADQMLAVG
Sbjct: 230  TVCVYGGVSYNIQQNALTRGVDVVVGTPGRIIDLVNGNSLQLGEVQYLVLDEADQMLAVG 289

Query: 1992 FEEDVEVILENLPPERQSMLFSATMPGWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLY 1813
            FEEDVEVILE LP  RQSMLFSATMPGWVKKLARKYL+NP+TIDLVGD+EEKLAEGIKLY
Sbjct: 290  FEEDVEVILEKLPTGRQSMLFSATMPGWVKKLARKYLDNPMTIDLVGDQEEKLAEGIKLY 349

Query: 1812 ALQATGTSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSLALTNIIASEALHGDISQHQ 1633
            A+  T T+KRTIL DL+TVYAKGGKTIVFTQTKRDADEVSLALT+ I SEALHGDISQHQ
Sbjct: 350  AIPTTATTKRTILGDLITVYAKGGKTIVFTQTKRDADEVSLALTSSITSEALHGDISQHQ 409

Query: 1632 RERTLNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG 1453
            RERTLNGFRQGKFTVLVATDVAARGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG
Sbjct: 410  RERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG 469

Query: 1452 SAILMFTSSQRRTVRSLERDVGCRFDFINPPSIEEVLGSSADQVVATLAGVHPESVQYFT 1273
            +AILMFT SQRRT++SLERDVGC F+FI+PP +EEVL SSA+QVVATL GVHPES+Q+F 
Sbjct: 470  TAILMFTGSQRRTIKSLERDVGCSFEFISPPQMEEVLESSAEQVVATLKGVHPESIQFFL 529

Query: 1272 PTAQKLMDEQGVDALAAALAQLSGFSRPPSSRSLITHEQGWVTLQLTRDSGYSRGFLSAR 1093
            P AQ++++EQG DALAAALA LSGFS+PPSSRSL+THEQGWVTLQLTR+ G+SRGFLSAR
Sbjct: 530  PAAQRMIEEQGTDALAAALAHLSGFSQPPSSRSLVTHEQGWVTLQLTREQGFSRGFLSAR 589

Query: 1092 SVTGFLSDVYSAAADEVGKIHIVADERVQGAVFDLPEEIAKELLDKQLPPGNTITKVSKL 913
            SVTGFLSD+Y AAADEVGKIH++ADERVQGAVFDLPEEIAKELL KQ PPGNTI+K++KL
Sbjct: 590  SVTGFLSDIYPAAADEVGKIHLIADERVQGAVFDLPEEIAKELLTKQTPPGNTISKITKL 649

Query: 912  PALQDDGPAGDFYGRFSNRDRGA----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 745
            P LQDDGP+GD YGRF +RDRG                                      
Sbjct: 650  PPLQDDGPSGDNYGRFPSRDRGGRGGLRDRGGFRGSRNWGRSDSDDEDQFRRGGRNFRGG 709

Query: 744  XXXXXXXXXXXXXXDWLINDRRSSR-SSFGNRDSGFGGACFNCGRTGHRASECPTKQSY 571
                          DWLI +RRS+R SSFG+RD  FGGACF CGR GHRA++CP+KQ +
Sbjct: 710  SSQSRNSWRSNDDDDWLIGNRRSNRSSSFGSRDRSFGGACFVCGRAGHRAADCPSKQDF 768


>ref|XP_006382234.1| hypothetical protein POPTR_0005s00200g [Populus trichocarpa]
            gi|550337585|gb|ERP60031.1| hypothetical protein
            POPTR_0005s00200g [Populus trichocarpa]
          Length = 774

 Score =  982 bits (2539), Expect = 0.0
 Identities = 532/781 (68%), Positives = 596/781 (76%), Gaps = 24/781 (3%)
 Frame = -2

Query: 2856 MACSSSIIGVSSIYQA-------------TPSSLELPKR-PTSNSPLSLPFSDKSHFNGL 2719
            MA +S++IGVSSI+ +             T ++  L    P S+S  S       HFN L
Sbjct: 1    MASTSTVIGVSSIFHSKTTTSCRRAAAATTTTAANLSSAMPLSSSSASFLSEKPPHFNSL 60

Query: 2718 KSSSSNTHSRFRQSAACNGNSFVT--SAVVTPNSVLSEEAFKGFGGFDKDSLDVSENE-- 2551
                + T   F+ S   N NS  T  SA+ TPN +LSEEAFKG  GF     D   ++  
Sbjct: 61   ---IAKTQLSFKHSLIINTNSTFTPPSAIATPNPILSEEAFKGLDGFSDFEADADTDDAV 117

Query: 2550 -YETEEDEVAGEIAVENKNELVVSKLGLPQKLVESLEGRGITELFPIQRAVLTPALEGRD 2374
             Y++ E E     +   ++EL +SKLGLPQ+LV++L+ RGIT LFPIQRAVL P LEGRD
Sbjct: 118  DYDSSETEPNSNTS---EDELDISKLGLPQRLVQTLQNRGITHLFPIQRAVLIPTLEGRD 174

Query: 2373 IIARAKTGTGKTLAFGIPIIKKLTEDXXXXXXXXXXXXXXXXXXXAPTRELAKQVEKEIK 2194
            +IARAKTGTGKTLAFGIPIIK+LTED                   APTRELAKQVEKEIK
Sbjct: 175  LIARAKTGTGKTLAFGIPIIKRLTEDAELRGSQRRTGRLPKVLVLAPTRELAKQVEKEIK 234

Query: 2193 ESAPYLNTVCVYGGVSYITQQNALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEA 2014
            ESAPYL+TVCVYGGVSY TQQNALSRGVDVVVGTPGRIIDL+ GNSLKLGEV+YLVLDEA
Sbjct: 235  ESAPYLSTVCVYGGVSYATQQNALSRGVDVVVGTPGRIIDLLKGNSLKLGEVEYLVLDEA 294

Query: 2013 DQMLAVGFEEDVEVILENLPPERQSMLFSATMPGWVKKLARKYLNNPLTIDLVGDEEEKL 1834
            DQML+ GFEEDVEVILE+LP +RQSMLFSATMP WVKKLARKYL+NPL IDLVGD EEKL
Sbjct: 295  DQMLSFGFEEDVEVILESLPSKRQSMLFSATMPTWVKKLARKYLDNPLQIDLVGDREEKL 354

Query: 1833 AEGIKLYALQATGTSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSLALTNIIASEALH 1654
            AEGIKLYA+  T TSKRTILSDLVTVYAKG KTI+FT+TKRDADEVS+ALT  IASEALH
Sbjct: 355  AEGIKLYAISTTATSKRTILSDLVTVYAKGEKTIIFTRTKRDADEVSMALTQSIASEALH 414

Query: 1653 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRT 1474
            GDISQHQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRT
Sbjct: 415  GDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRT 474

Query: 1473 GRAGKEGSAILMFTSSQRRTVRSLERDVGCRFDFINPPSIEEVLGSSADQVVATLAGVHP 1294
            GRAGKEG+AILMFT+SQRRTVRSLERD GC+F+F++PP+IEE+L SS +QVVATL GVHP
Sbjct: 475  GRAGKEGTAILMFTNSQRRTVRSLERDAGCKFEFVSPPAIEELLESSTEQVVATLNGVHP 534

Query: 1293 ESVQYFTPTAQKLMDEQGVDALAAALAQLSGFSRPPSSRSLITHEQGWVTLQLTRDSGYS 1114
            ESV++FTPTAQKL++EQG  ALAAALA LSGFSRPPSSRSLI+HEQGW TLQLTRD  YS
Sbjct: 535  ESVEFFTPTAQKLIEEQGTSALAAALAHLSGFSRPPSSRSLISHEQGWTTLQLTRDPTYS 594

Query: 1113 RGFLSARSVTGFLSDVYSAAADEVGKIHIVADERVQGAVFDLPEEIAKELLDKQLPPGNT 934
            RGFLSARSVTGFLSDVY AAADE+GKIH++ADERVQGAVFDLPEEIAKELL+KQLPPGNT
Sbjct: 595  RGFLSARSVTGFLSDVYPAAADEIGKIHLIADERVQGAVFDLPEEIAKELLNKQLPPGNT 654

Query: 933  ITKVSKLPALQDDGPAGDFYGRFSNRDR----GAXXXXXXXXXXXXXXXXXXXXXXXXXX 766
            I K++KLPALQDDGP  DFYGRFS+RDR    G                           
Sbjct: 655  IEKITKLPALQDDGPPSDFYGRFSSRDRPARGGPRGQRGGFRSSRGQGSGRYSDDEGTNR 714

Query: 765  XXXXXXXXXXXXXXXXXXXXXDWLINDRRSSRSSFGNRDS-GFGGACFNCGRTGHRASEC 589
                                 DWL+  RRSSR S  +RDS  FGG+CFNCGR+GHRASEC
Sbjct: 715  RGGRSNSNENTRSWMSRSSGDDWLVGGRRSSRPS--SRDSRSFGGSCFNCGRSGHRASEC 772

Query: 588  P 586
            P
Sbjct: 773  P 773


>ref|XP_006480315.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X1 [Citrus sinensis]
          Length = 768

 Score =  981 bits (2537), Expect = 0.0
 Identities = 528/774 (68%), Positives = 599/774 (77%), Gaps = 20/774 (2%)
 Frame = -2

Query: 2847 SSSIIGVSSI-YQATPSSLELPKRPTSNSPLSLPFSDKSHFNGLKSSSSNTHSRFRQSAA 2671
            SS+++GVSS  Y    S    P   TS++ LSLP +DKSHFN L ++SS       ++  
Sbjct: 3    SSTVLGVSSTPYLEVSSKRTTPPATTSSALLSLPLADKSHFNALIATSSVAKPLGFRNGG 62

Query: 2670 CNGN------SFVTSAVVTPNSVLSEEAFKGFGGFDKDS--LD--VSENEYETEEDEVAG 2521
             +G       +FV SA+ TPN+VLSEEAFK  G F ++S  LD  VS+ +YE++      
Sbjct: 63   GSGFGFKQSLTFVPSAIATPNTVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQ------ 116

Query: 2520 EIAVENKNELVVSKLGLPQKLVESLEGRGITELFPIQRAVLTPALEGRDIIARAKTGTGK 2341
               V +++EL +SKLGLP +L ESLE RGIT LFPIQRAV  PAL+GRD+IARAKTGTGK
Sbjct: 117  --TVSDEDELAISKLGLPGRLAESLEKRGITHLFPIQRAVFEPALQGRDLIARAKTGTGK 174

Query: 2340 TLAFGIPIIKKLTEDXXXXXXXXXXXXXXXXXXXAPTRELAKQVEKEIKESAPYLNTVCV 2161
            TLAFGIPI+K+LTE                     PTRELA+QVEKEIKESAPYLNTVCV
Sbjct: 175  TLAFGIPILKRLTEGYEQAISLRRSRLPKVLVLA-PTRELARQVEKEIKESAPYLNTVCV 233

Query: 2160 YGGVSYITQQNALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADQMLAVGFEED 1981
            YGGVSY TQQNALSRGVDVVVGTPGRIIDLIN +SLKLGEV+YLVLDEADQMLAVGFEED
Sbjct: 234  YGGVSYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEADQMLAVGFEED 293

Query: 1980 VEVILENLPPERQSMLFSATMPGWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYALQA 1801
            VE+ILENLPP+RQSMLFSATMP WVKKL+RKYL+NPL IDLVG+++EKLAEGIKLYA+  
Sbjct: 294  VELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAIST 353

Query: 1800 TGTSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSLALTNIIASEALHGDISQHQRERT 1621
            T TSKRTILSDL+TVYAKGGKTIVFTQTKRDADEVSLALT+IIASEALHGDISQHQRERT
Sbjct: 354  TATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERT 413

Query: 1620 LNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAIL 1441
            LNGFRQGKFTVLVATDVAARGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG+AIL
Sbjct: 414  LNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAIL 473

Query: 1440 MFTSSQRRTVRSLERDVGCRFDFINPPSIEEVLGSSADQVVATLAGVHPESVQYFTPTAQ 1261
            MFTSSQRRTVRSLERDVGC+F+F++PP +E+VL SSA+QVVATL GVHPESV++FTPTAQ
Sbjct: 474  MFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQ 533

Query: 1260 KLMDEQGVDALAAALAQLSGFSRPPSSRSLITHEQGWVTLQLTRDSGYSRGFLSARSVTG 1081
            +L++E+G DALAAALAQLSGFSRPPSSRSLI HEQGWVTLQLTRDS +SRGF+SARSV G
Sbjct: 534  RLIEEKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMG 593

Query: 1080 FLSDVYSAAADEVGKIHIVADERVQGAVFDLPEEIAKELLDKQLPPGNTITKVSKLPALQ 901
            FLSDVY  AADE+GKIHI+AD+RVQGAVFDLPEEIAKELL+KQ+PPGNTI+K++KLP LQ
Sbjct: 594  FLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKITKLPVLQ 653

Query: 900  DDGPA---------GDFYGRFSNRDRGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 748
            DDGP+         GD + R                                        
Sbjct: 654  DDGPSSDNYGRFSSGDRFSRGGGSRFSRGGARGGGFRSSRSWGSDDEDGFSSSRGGRSFR 713

Query: 747  XXXXXXXXXXXXXXXDWLINDRRSSRSSFGNRDSGFGGACFNCGRTGHRASECP 586
                           DWLI   RSSRSS  +    FGGACFNCGR+GHRASECP
Sbjct: 714  SGNNQGSRFSTSSDDDWLIGGSRSSRSSSRDSSRSFGGACFNCGRSGHRASECP 767


>ref|XP_004135577.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Cucumis sativus]
          Length = 748

 Score =  981 bits (2536), Expect = 0.0
 Identities = 529/762 (69%), Positives = 593/762 (77%), Gaps = 7/762 (0%)
 Frame = -2

Query: 2844 SSIIGVSSIYQATPSSLELPKRP----TSNSPLSLPFSDKSHFNGLKSSSSNTHSRFRQS 2677
            +S++GV++I  A   +L+L +R     T++   SL F DKSH   LK  +      F  S
Sbjct: 2    ASLLGVTAILHAP--NLDLYRRTGTTATASPTPSLSFVDKSHLIALKVQTC-----FSGS 54

Query: 2676 AACNGNSFVTSAVVTPNSVLSEEAFKGFGGFDKDSLDVSENEYETEEDEVAGEIAVENKN 2497
            +  N + F +SA+ TPNS+LSEEAF+ F GF +DSLD  +N  + E +      A  + +
Sbjct: 55   SRRNLSGFTSSAIATPNSILSEEAFRSFDGFSEDSLD--DNLIDPEPNSSLAFAA--DDD 110

Query: 2496 ELVVSKLGLPQKLVESLEGRGITELFPIQRAVLTPALEGRDIIARAKTGTGKTLAFGIPI 2317
            EL +SKL LPQ+L ++L+ RGIT LFPIQRAVL PALEGRD+IARAKTGTGKTLAFGIPI
Sbjct: 111  ELAISKLNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPI 170

Query: 2316 IKKLTEDXXXXXXXXXXXXXXXXXXXAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYIT 2137
            +KKLTED                    PTRELAKQVEKEIKESAPYLNTVCVYGGVSYIT
Sbjct: 171  LKKLTEDDESRSLRRRSRLPRVLVLT-PTRELAKQVEKEIKESAPYLNTVCVYGGVSYIT 229

Query: 2136 QQNALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADQMLAVGFEEDVEVILENL 1957
            QQNALSRGVDVVVGTPGR+IDLINGNSL LGEV+YLVLDEADQMLAVGFEEDVEVILE L
Sbjct: 230  QQNALSRGVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKL 289

Query: 1956 PPERQSMLFSATMPGWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYALQATGTSKRTI 1777
            P +RQ+MLFSATMP WVKKLARKYL+NPLTIDLVGD++EKLAEGIKL+A+  T TSK+TI
Sbjct: 290  PSQRQNMLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTI 349

Query: 1776 LSDLVTVYAKGGKTIVFTQTKRDADEVSLALTNIIASEALHGDISQHQRERTLNGFRQGK 1597
            L DLVTVYAKGGKTIVFTQTKRDADEVSLAL N I SEALHGDISQHQRERTLNGFRQGK
Sbjct: 350  LRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGK 409

Query: 1596 FTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRR 1417
            FTVLVATDVA+RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILMFT+SQRR
Sbjct: 410  FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRR 469

Query: 1416 TVRSLERDVGCRFDFINPPSIEEVLGSSADQVVATLAGVHPESVQYFTPTAQKLMDEQGV 1237
            TVRSLERDVGC+F+F NPP +EEVL SSA+QVV TL GVHPES++YFTPTAQKL+DEQG+
Sbjct: 470  TVRSLERDVGCKFEFANPPGMEEVLKSSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGL 529

Query: 1236 DALAAALAQLSGFSRPPSSRSLITHEQGWVTLQLTRDSGYSRGFLSARSVTGFLSDVYSA 1057
             ALAAALAQLSGF+ PPSSRSLI HEQGWVTLQLTRD  YSRGFLSARSVTGFLSDVYS 
Sbjct: 530  GALAAALAQLSGFTHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDVYSP 589

Query: 1056 AADEVGKIHIVADERVQGAVFDLPEEIAKELLDKQLPPGNTITKVSKLPALQDDGPAGDF 877
            AADE+GKIH++ADER+ GAVFDLPEEIAKELL+K+LP GNTI K++KLP LQDDGP  D 
Sbjct: 590  AADEIGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKITKLPPLQDDGPPSDN 649

Query: 876  YGRFSNRD---RGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 706
            YGRFS R+   R +                                              
Sbjct: 650  YGRFSGRERSSRNSSRDRRGLKTSRGWGSSRDSDDNGDIFSRNRSFRTNNSKGRNFRSSG 709

Query: 705  XDWLINDRRSSRSSFGNRDSGFGGACFNCGRTGHRASECPTK 580
             DWLI  RRSSRSS  +R   FGG+CFNCGR GHRASECP K
Sbjct: 710  DDWLIGGRRSSRSSSVDR---FGGSCFNCGRMGHRASECPDK 748


>ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X2 [Citrus sinensis]
          Length = 767

 Score =  980 bits (2533), Expect = 0.0
 Identities = 531/775 (68%), Positives = 602/775 (77%), Gaps = 21/775 (2%)
 Frame = -2

Query: 2847 SSSIIGVSSI-YQATPSSLELPKRPTSNSPLSLPFSDKSHFNGLKSSSSNTHSRFRQSAA 2671
            SS+++GVSS  Y    S    P   TS++ LSLP +DKSHFN L ++SS       ++  
Sbjct: 3    SSTVLGVSSTPYLEVSSKRTTPPATTSSALLSLPLADKSHFNALIATSSVAKPLGFRNGG 62

Query: 2670 CNGN------SFVTSAVVTPNSVLSEEAFKGFGGFDKDS--LD--VSENEYETEEDEVAG 2521
             +G       +FV SA+ TPN+VLSEEAFK  G F ++S  LD  VS+ +YE++      
Sbjct: 63   GSGFGFKQSLTFVPSAIATPNTVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQ------ 116

Query: 2520 EIAVENKNELVVSKLGLPQKLVESLEGRGITELFPIQRAVLTPALEGRDIIARAKTGTGK 2341
               V +++EL +SKLGLP +L ESLE RGIT LFPIQRAV  PAL+GRD+IARAKTGTGK
Sbjct: 117  --TVSDEDELAISKLGLPGRLAESLEKRGITHLFPIQRAVFEPALQGRDLIARAKTGTGK 174

Query: 2340 TLAFGIPIIKKLTEDXXXXXXXXXXXXXXXXXXXAPTRELAKQVEKEIKESAPYLNTVCV 2161
            TLAFGIPI+K+LTE                     PTRELA+QVEKEIKESAPYLNTVCV
Sbjct: 175  TLAFGIPILKRLTEGYEQAISLRRSRLPKVLVLA-PTRELARQVEKEIKESAPYLNTVCV 233

Query: 2160 YGGVSYITQQNALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADQMLAVGFEED 1981
            YGGVSY TQQNALSRGVDVVVGTPGRIIDLIN +SLKLGEV+YLVLDEADQMLAVGFEED
Sbjct: 234  YGGVSYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEADQMLAVGFEED 293

Query: 1980 VEVILENLPPERQSMLFSATMPGWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYALQA 1801
            VE+ILENLPP+RQSMLFSATMP WVKKL+RKYL+NPL IDLVG+++EKLAEGIKLYA+  
Sbjct: 294  VELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAIST 353

Query: 1800 TGTSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSLALTNIIASEALHGDISQHQRERT 1621
            T TSKRTILSDL+TVYAKGGKTIVFTQTKRDADEVSLALT+IIASEALHGDISQHQRERT
Sbjct: 354  TATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERT 413

Query: 1620 LNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAIL 1441
            LNGFRQGKFTVLVATDVAARGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG+AIL
Sbjct: 414  LNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAIL 473

Query: 1440 MFTSSQRRTVRSLERDVGCRFDFINPPSIEEVLGSSADQVVATLAGVHPESVQYFTPTAQ 1261
            MFTSSQRRTVRSLERDVGC+F+F++PP +E+VL SSA+QVVATL GVHPESV++FTPTAQ
Sbjct: 474  MFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQ 533

Query: 1260 KLMDEQGVDALAAALAQLSGFSRPPSSRSLITHEQGWVTLQLTRDSGYSRGFLSARSVTG 1081
            +L++E+G DALAAALAQLSGFSRPPSSRSLI HEQGWVTLQLTRDS +SRGF+SARSV G
Sbjct: 534  RLIEEKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMG 593

Query: 1080 FLSDVYSAAADEVGKIHIVADERVQGAVFDLPEEIAKELLDKQLPPGNTITKVSKLPALQ 901
            FLSDVY  AADE+GKIHI+AD+RVQGAVFDLPEEIAKELL+KQ+PPGNTI+K++KLP LQ
Sbjct: 594  FLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKITKLPVLQ 653

Query: 900  DDGPA---------GDFYGRFSNRDRGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 748
            DDGP+         GD + R                                        
Sbjct: 654  DDGPSSDNYGRFSSGDRFSRGGGSRFSRGGARGGGFRSSRSWGSDDEDGFSSSRGGRSFR 713

Query: 747  XXXXXXXXXXXXXXXDWLINDRRSSRSSFGNRDS-GFGGACFNCGRTGHRASECP 586
                           DWLI   RSSRSS  +RDS  FGGACFNCGR+GHRASECP
Sbjct: 714  SGNNQGSRFSTSSDDDWLIGGSRSSRSS--SRDSRSFGGACFNCGRSGHRASECP 766


>emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]
          Length = 786

 Score =  976 bits (2523), Expect = 0.0
 Identities = 529/717 (73%), Positives = 587/717 (81%), Gaps = 49/717 (6%)
 Frame = -2

Query: 2847 SSSIIGVSSIYQATPSSLELPKRPTSNSPLSLPFSDKSHFNGLKSSSSNTHS--RFRQSA 2674
            +SSIIGVSS+YQ T  +LEL +R +++S LSLPFSDK+H    K+ ++   S    R+S 
Sbjct: 2    ASSIIGVSSVYQTT--ALELSRRTSAHS-LSLPFSDKTHLGVFKAPNTRVLSDASLRRSF 58

Query: 2673 ACNGNSFVTSAVVTPNSVLSEEAFKGFGGFDKDSLDVSENEYETEEDEVAGEIAVENKNE 2494
               G SFV SA+ TPNSVLSEEAFKG GGF KD LDV++ + + + +  A   A E+  E
Sbjct: 59   K-QGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAAQED--E 115

Query: 2493 LVVSKLGLPQKLVESLEGRGITELFPIQRAVLTPALEGRDIIARAKTGTGKTLAFGIPII 2314
            L +++LGLP +LVESLE RGIT LFPIQRAVL PALEGRD+IARAKTGTGKTLAFGIPII
Sbjct: 116  LALAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPII 175

Query: 2313 KKLTEDXXXXXXXXXXXXXXXXXXXAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQ 2134
            K+L+ED                   APTRELAKQVEKEIKESAPYL+TVCVYGGVSYITQ
Sbjct: 176  KRLSEDDEKRTSQRRSGRLPRVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYITQ 235

Query: 2133 QNALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADQMLAVGFEEDVEVILENLP 1954
            QNALSRGVDVVVGTPGRIIDLI GNSLKLGEVQ LVLDEADQMLAVGFEEDVEVILE LP
Sbjct: 236  QNALSRGVDVVVGTPGRIIDLIKGNSLKLGEVQNLVLDEADQMLAVGFEEDVEVILEKLP 295

Query: 1953 PERQSMLFSATMPGWVKKLARKYLNNPLTIDL-----------------------VGDEE 1843
             ERQSMLFSATMP WVKKLARKYL+NPLTIDL                       VGD +
Sbjct: 296  SERQSMLFSATMPAWVKKLARKYLDNPLTIDLGNFCPHWGLNLEPPKNPPQTLDHVGDHD 355

Query: 1842 EKLAEGIKLYALQATGTSKRTILSDLVT---------------VYAKGGKTIVFTQTKRD 1708
            EKLAEGIKLYA+  T TSKRTILSDL+T               VYAKGGKTIVFTQTKRD
Sbjct: 356  EKLAEGIKLYAIPTTATSKRTILSDLITKNIVKDRGGFQYGHKVYAKGGKTIVFTQTKRD 415

Query: 1707 ADEVSLALTNIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDL-- 1534
            ADEVS+ALTN IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDL  
Sbjct: 416  ADEVSMALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLKY 475

Query: 1533 -------VIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGCRFD 1375
                   +IHYELPNDPETFVHRSGRTGRAGKEG+AILMFTSSQRRTV+SLERDVGC+F+
Sbjct: 476  VDLLFLQIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVKSLERDVGCKFE 535

Query: 1374 FINPPSIEEVLGSSADQVVATLAGVHPESVQYFTPTAQKLMDEQGVDALAAALAQLSGFS 1195
            FI+PP+IEEVL SSA+QVVATL GVHPESV++FTPTAQKL++E+G  ALAAALA LSGFS
Sbjct: 536  FISPPAIEEVLESSAEQVVATLNGVHPESVEFFTPTAQKLIEEKGTGALAAALAHLSGFS 595

Query: 1194 RPPSSRSLITHEQGWVTLQLTRDSGYSRGFLSARSVTGFLSDVYSAAADEVGKIHIVADE 1015
            +PPS RSLI+HEQGWVTLQLTRDSGYSRGFLSARSVTGFLSDVY  AADE+GKI++VADE
Sbjct: 596  QPPSFRSLISHEQGWVTLQLTRDSGYSRGFLSARSVTGFLSDVYPTAADELGKIYLVADE 655

Query: 1014 RVQGAVFDLPEEIAKELLDKQLPPGNTITKVSKLPALQDDGPAGDFYGRFSNRDRGA 844
            RVQGAVFDLPEEIAKELL+KQ+PPGNTI+K++KLPALQDDGPAGD+YGRFSNRDR +
Sbjct: 656  RVQGAVFDLPEEIAKELLNKQMPPGNTISKITKLPALQDDGPAGDYYGRFSNRDRSS 712


>ref|XP_002330040.1| predicted protein [Populus trichocarpa]
          Length = 735

 Score =  975 bits (2521), Expect = 0.0
 Identities = 521/741 (70%), Positives = 578/741 (78%), Gaps = 10/741 (1%)
 Frame = -2

Query: 2778 PTSNSPLSLPFSDKSHFNGLKSSSSNTHSRFRQSAACNGNSFVT--SAVVTPNSVLSEEA 2605
            P S+S  S       HFN L    + T   F+ S   N NS  T  SA+ TPN +LSEEA
Sbjct: 2    PLSSSSASFLSEKPPHFNSL---IAKTQLSFKHSLIINTNSTFTPPSAIATPNPILSEEA 58

Query: 2604 FKGFGGFDKDSLDVSENE---YETEEDEVAGEIAVENKNELVVSKLGLPQKLVESLEGRG 2434
            FKG  GF     D   ++   Y++ E E     +   ++EL +SKLGLPQ+LV++L+ RG
Sbjct: 59   FKGLDGFSDFEADADTDDAVDYDSSETEPNSNTS---EDELDISKLGLPQRLVQTLQNRG 115

Query: 2433 ITELFPIQRAVLTPALEGRDIIARAKTGTGKTLAFGIPIIKKLTEDXXXXXXXXXXXXXX 2254
            IT LFPIQRAVL P LEGRD+IARAKTGTGKTLAFGIPIIK+LTED              
Sbjct: 116  ITHLFPIQRAVLIPTLEGRDLIARAKTGTGKTLAFGIPIIKRLTEDAELRGSQRRTGRLP 175

Query: 2253 XXXXXAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQQNALSRGVDVVVGTPGRIID 2074
                 APTRELAKQVEKEIKESAPYL+TVCVYGGVSY TQQNALSRGVDVVVGTPGRIID
Sbjct: 176  KVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYATQQNALSRGVDVVVGTPGRIID 235

Query: 2073 LINGNSLKLGEVQYLVLDEADQMLAVGFEEDVEVILENLPPERQSMLFSATMPGWVKKLA 1894
            L+ GNSLKLGEV+YLVLDEADQML+ GFEEDVEVILE+LP +RQSMLFSATMP WVKKLA
Sbjct: 236  LLKGNSLKLGEVEYLVLDEADQMLSFGFEEDVEVILESLPSKRQSMLFSATMPTWVKKLA 295

Query: 1893 RKYLNNPLTIDLVGDEEEKLAEGIKLYALQATGTSKRTILSDLVTVYAKGGKTIVFTQTK 1714
            RKYL+NPL IDLVGD EEKLAEGIKLYA+  T TSKRTILSDLVTVYAKG KTI+FT+TK
Sbjct: 296  RKYLDNPLQIDLVGDREEKLAEGIKLYAISTTATSKRTILSDLVTVYAKGEKTIIFTRTK 355

Query: 1713 RDADEVSLALTNIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDL 1534
            RDADEVS+ALT  IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL
Sbjct: 356  RDADEVSMALTQSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDL 415

Query: 1533 VIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGCRFDFINPPSI 1354
            +IHYELPNDPETFVHRSGRTGRAGKEG+AILMFT+SQRRTVRSLERD GC+F+F++PP+I
Sbjct: 416  IIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDAGCKFEFVSPPAI 475

Query: 1353 EEVLGSSADQVVATLAGVHPESVQYFTPTAQKLMDEQGVDALAAALAQLSGFSRPPSSRS 1174
            EE+L SS +QVVATL GVHPESV++FTPTAQKL++EQG  ALAAALA LSGFSRPPSSRS
Sbjct: 476  EELLESSTEQVVATLNGVHPESVEFFTPTAQKLIEEQGTSALAAALAHLSGFSRPPSSRS 535

Query: 1173 LITHEQGWVTLQLTRDSGYSRGFLSARSVTGFLSDVYSAAADEVGKIHIVADERVQGAVF 994
            LI+HEQGW TLQLTRD  YSRGFLSARSVTGFLSDVY AAADE+GKIH++ADERVQGAVF
Sbjct: 536  LISHEQGWTTLQLTRDPTYSRGFLSARSVTGFLSDVYPAAADEIGKIHLIADERVQGAVF 595

Query: 993  DLPEEIAKELLDKQLPPGNTITKVSKLPALQDDGPAGDFYGRFSNRDR----GAXXXXXX 826
            DLPEEIAKELL+KQLPPGNTI K++KLPALQDDGP  DFYGRFS+RDR    G       
Sbjct: 596  DLPEEIAKELLNKQLPPGNTIEKITKLPALQDDGPPSDFYGRFSSRDRPARGGPRGQRGG 655

Query: 825  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDWLINDRRSSRSSFGNRDS 646
                                                     DWL+  RRSSR S  +RDS
Sbjct: 656  FRSSRGQGSGRYSDDEGTNRRGGRSNSNENTRSWMSRSSGDDWLVGGRRSSRPS--SRDS 713

Query: 645  -GFGGACFNCGRTGHRASECP 586
              FGG+CFNCGR+GHRASECP
Sbjct: 714  RSFGGSCFNCGRSGHRASECP 734


>ref|XP_006423936.1| hypothetical protein CICLE_v10027858mg [Citrus clementina]
            gi|557525870|gb|ESR37176.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
          Length = 780

 Score =  963 bits (2489), Expect = 0.0
 Identities = 505/677 (74%), Positives = 574/677 (84%), Gaps = 11/677 (1%)
 Frame = -2

Query: 2847 SSSIIGVSSI-YQATPSSLELPKRPTSNSPLSLPFSDKSHFNGLKSSSSNTHSRFRQSAA 2671
            SS+++GVSS  Y    S    P   TS++ LSLP +DKSHFN L ++SS       ++  
Sbjct: 3    SSTVLGVSSTPYLEVSSKRTTPPATTSSALLSLPLADKSHFNALIATSSVAKPLGFRNGG 62

Query: 2670 CNGN------SFVTSAVVTPNSVLSEEAFKGFGGFDKDS--LD--VSENEYETEEDEVAG 2521
             +G       +FV SA+ TPN+VLSEEAFK  G F ++S  LD  VS+ +YE++      
Sbjct: 63   GSGFGFKQSLTFVPSAIATPNTVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQ------ 116

Query: 2520 EIAVENKNELVVSKLGLPQKLVESLEGRGITELFPIQRAVLTPALEGRDIIARAKTGTGK 2341
               V +++EL +SKLGLP +L ESLE RGIT LFPIQRAV  PAL+GRD+IARAKTGTGK
Sbjct: 117  --TVSDEDELAISKLGLPGRLAESLEKRGITHLFPIQRAVFEPALQGRDLIARAKTGTGK 174

Query: 2340 TLAFGIPIIKKLTEDXXXXXXXXXXXXXXXXXXXAPTRELAKQVEKEIKESAPYLNTVCV 2161
            TLAFGIPI+K+LTE                     PTRELA+QVEKEIKESAPYLNTVCV
Sbjct: 175  TLAFGIPILKRLTEGYEQAISLRRSRLPKVLVLA-PTRELARQVEKEIKESAPYLNTVCV 233

Query: 2160 YGGVSYITQQNALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADQMLAVGFEED 1981
            YGGVSY TQQNALSRGVDVVVGTPGRIIDLIN +SLKLGEV+YLVLDEADQMLAVGFEED
Sbjct: 234  YGGVSYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEADQMLAVGFEED 293

Query: 1980 VEVILENLPPERQSMLFSATMPGWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYALQA 1801
            VE+ILENLPP+RQSMLFSATMP WVKKL+RKYL+NPL IDLVG+++EKLAEGIKLYA+  
Sbjct: 294  VELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAIST 353

Query: 1800 TGTSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSLALTNIIASEALHGDISQHQRERT 1621
            T TSKRTILSDL+TVYAKGGKTIVFTQTKRDADEVSLALT+IIASEALHGDISQHQRERT
Sbjct: 354  TATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERT 413

Query: 1620 LNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAIL 1441
            LNGFRQGKFTVLVATDVAARGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG+AIL
Sbjct: 414  LNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAIL 473

Query: 1440 MFTSSQRRTVRSLERDVGCRFDFINPPSIEEVLGSSADQVVATLAGVHPESVQYFTPTAQ 1261
            MFTSSQRRTVRSLERDVGC+F+F++PP +E+VL SSA+QVVATL GVHPESV++FTPTAQ
Sbjct: 474  MFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQ 533

Query: 1260 KLMDEQGVDALAAALAQLSGFSRPPSSRSLITHEQGWVTLQLTRDSGYSRGFLSARSVTG 1081
            +L++E+G DALAAALAQLSGFSRPPSSRSLI HEQGWVTLQLTRDS +SRGF+SARSV G
Sbjct: 534  RLIEEKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMG 593

Query: 1080 FLSDVYSAAADEVGKIHIVADERVQGAVFDLPEEIAKELLDKQLPPGNTITKVSKLPALQ 901
            FLSDVY  AADE+GKIHI+AD+RVQGAVFDLPEEIAKELL+KQ+PPGNTI+K++KLP LQ
Sbjct: 594  FLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKITKLPVLQ 653

Query: 900  DDGPAGDFYGRFSNRDR 850
            DDGP+ D YGRFS+ DR
Sbjct: 654  DDGPSSDNYGRFSSGDR 670



 Score = 62.4 bits (150), Expect = 1e-06
 Identities = 27/38 (71%), Positives = 29/38 (76%)
 Frame = -2

Query: 699 WLINDRRSSRSSFGNRDSGFGGACFNCGRTGHRASECP 586
           WLI   RSSRSS  +    FGGACFNCGR+GHRASECP
Sbjct: 742 WLIGGSRSSRSSSRDSSRSFGGACFNCGRSGHRASECP 779


>ref|XP_006423935.1| hypothetical protein CICLE_v10027858mg [Citrus clementina]
            gi|567862566|ref|XP_006423937.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
            gi|557525869|gb|ESR37175.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
            gi|557525871|gb|ESR37177.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
          Length = 779

 Score =  963 bits (2489), Expect = 0.0
 Identities = 505/677 (74%), Positives = 574/677 (84%), Gaps = 11/677 (1%)
 Frame = -2

Query: 2847 SSSIIGVSSI-YQATPSSLELPKRPTSNSPLSLPFSDKSHFNGLKSSSSNTHSRFRQSAA 2671
            SS+++GVSS  Y    S    P   TS++ LSLP +DKSHFN L ++SS       ++  
Sbjct: 3    SSTVLGVSSTPYLEVSSKRTTPPATTSSALLSLPLADKSHFNALIATSSVAKPLGFRNGG 62

Query: 2670 CNGN------SFVTSAVVTPNSVLSEEAFKGFGGFDKDS--LD--VSENEYETEEDEVAG 2521
             +G       +FV SA+ TPN+VLSEEAFK  G F ++S  LD  VS+ +YE++      
Sbjct: 63   GSGFGFKQSLTFVPSAIATPNTVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQ------ 116

Query: 2520 EIAVENKNELVVSKLGLPQKLVESLEGRGITELFPIQRAVLTPALEGRDIIARAKTGTGK 2341
               V +++EL +SKLGLP +L ESLE RGIT LFPIQRAV  PAL+GRD+IARAKTGTGK
Sbjct: 117  --TVSDEDELAISKLGLPGRLAESLEKRGITHLFPIQRAVFEPALQGRDLIARAKTGTGK 174

Query: 2340 TLAFGIPIIKKLTEDXXXXXXXXXXXXXXXXXXXAPTRELAKQVEKEIKESAPYLNTVCV 2161
            TLAFGIPI+K+LTE                     PTRELA+QVEKEIKESAPYLNTVCV
Sbjct: 175  TLAFGIPILKRLTEGYEQAISLRRSRLPKVLVLA-PTRELARQVEKEIKESAPYLNTVCV 233

Query: 2160 YGGVSYITQQNALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADQMLAVGFEED 1981
            YGGVSY TQQNALSRGVDVVVGTPGRIIDLIN +SLKLGEV+YLVLDEADQMLAVGFEED
Sbjct: 234  YGGVSYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEADQMLAVGFEED 293

Query: 1980 VEVILENLPPERQSMLFSATMPGWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYALQA 1801
            VE+ILENLPP+RQSMLFSATMP WVKKL+RKYL+NPL IDLVG+++EKLAEGIKLYA+  
Sbjct: 294  VELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAIST 353

Query: 1800 TGTSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSLALTNIIASEALHGDISQHQRERT 1621
            T TSKRTILSDL+TVYAKGGKTIVFTQTKRDADEVSLALT+IIASEALHGDISQHQRERT
Sbjct: 354  TATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERT 413

Query: 1620 LNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAIL 1441
            LNGFRQGKFTVLVATDVAARGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG+AIL
Sbjct: 414  LNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAIL 473

Query: 1440 MFTSSQRRTVRSLERDVGCRFDFINPPSIEEVLGSSADQVVATLAGVHPESVQYFTPTAQ 1261
            MFTSSQRRTVRSLERDVGC+F+F++PP +E+VL SSA+QVVATL GVHPESV++FTPTAQ
Sbjct: 474  MFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQ 533

Query: 1260 KLMDEQGVDALAAALAQLSGFSRPPSSRSLITHEQGWVTLQLTRDSGYSRGFLSARSVTG 1081
            +L++E+G DALAAALAQLSGFSRPPSSRSLI HEQGWVTLQLTRDS +SRGF+SARSV G
Sbjct: 534  RLIEEKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMG 593

Query: 1080 FLSDVYSAAADEVGKIHIVADERVQGAVFDLPEEIAKELLDKQLPPGNTITKVSKLPALQ 901
            FLSDVY  AADE+GKIHI+AD+RVQGAVFDLPEEIAKELL+KQ+PPGNTI+K++KLP LQ
Sbjct: 594  FLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKITKLPVLQ 653

Query: 900  DDGPAGDFYGRFSNRDR 850
            DDGP+ D YGRFS+ DR
Sbjct: 654  DDGPSSDNYGRFSSGDR 670



 Score = 60.8 bits (146), Expect = 3e-06
 Identities = 30/39 (76%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
 Frame = -2

Query: 699 WLINDRRSSRSSFGNRDS-GFGGACFNCGRTGHRASECP 586
           WLI   RSSRSS  +RDS  FGGACFNCGR+GHRASECP
Sbjct: 742 WLIGGSRSSRSS--SRDSRSFGGACFNCGRSGHRASECP 778


>gb|EOY11808.1| DEAD box RNA helicase isoform 1 [Theobroma cacao]
          Length = 742

 Score =  957 bits (2475), Expect = 0.0
 Identities = 519/767 (67%), Positives = 587/767 (76%), Gaps = 9/767 (1%)
 Frame = -2

Query: 2844 SSIIGVSSIYQATPS-------SLELPKRPTSNSPLSLPFSDKSHFNGLKSSSSNTHSRF 2686
            +S++G+SS    TPS       +  +     + S L LPF+DK+ FN L  +     S F
Sbjct: 2    ASLVGLSSSIHHTPSLDTFSISNRRITSFTAAASCLPLPFTDKAQFNALVVAGRPLLS-F 60

Query: 2685 RQSAACNGNSFVTSAVVTPNSVLSEEAFKGFGGF-DKDSLDVSENEYETEEDEVAGEIAV 2509
            +       +SFV  AV TPNSVLSE+AFKG     D+D  DV E    +  D+       
Sbjct: 61   K-------HSFVPRAVATPNSVLSEQAFKGLSLHQDQDGQDVYEAAASSNHDD------- 106

Query: 2508 ENKNELVVSKLGLPQKLVESLEGRGITELFPIQRAVLTPALEGRDIIARAKTGTGKTLAF 2329
                EL +SKLGLPQ+LV+SL  RGIT LFPIQRAV  PAL+GRDIIARAKTGTGKTLAF
Sbjct: 107  ----ELDISKLGLPQRLVDSLLQRGITHLFPIQRAVFVPALQGRDIIARAKTGTGKTLAF 162

Query: 2328 GIPIIKKLTEDXXXXXXXXXXXXXXXXXXXA-PTRELAKQVEKEIKESAPYLNTVCVYGG 2152
            GIPIIK+LT D                     PTRELAKQVEKEIKESAPYLNTVCVYGG
Sbjct: 163  GIPIIKRLTHDAPQQTSPRRMSGRLPRVLVLAPTRELAKQVEKEIKESAPYLNTVCVYGG 222

Query: 2151 VSYITQQNALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADQMLAVGFEEDVEV 1972
            VSY TQ+NALSRGVDVVVGTPGRIIDLI  + LKLGEV+YLVLDEADQMLAVGFEEDVE 
Sbjct: 223  VSYNTQRNALSRGVDVVVGTPGRIIDLIESSDLKLGEVEYLVLDEADQMLAVGFEEDVEE 282

Query: 1971 ILENLPPERQSMLFSATMPGWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYALQATGT 1792
            ILENLP +RQSMLFSATMP WVKKLARKYL+NPL IDLVGD++EKLAEGIKLYA+  T T
Sbjct: 283  ILENLPSKRQSMLFSATMPSWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAISTTST 342

Query: 1791 SKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSLALTNIIASEALHGDISQHQRERTLNG 1612
            +KRTILSDL+TVYAKGGKTIVFTQTKRDAD+VS+ALTN IASEALHGDISQHQRERTLNG
Sbjct: 343  AKRTILSDLITVYAKGGKTIVFTQTKRDADDVSIALTNSIASEALHGDISQHQRERTLNG 402

Query: 1611 FRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFT 1432
            FRQGKFTVLVATDVA+RGLDIPNV+LVIHYELPND ETFVHRSGRTGRAGKEGSAILMFT
Sbjct: 403  FRQGKFTVLVATDVASRGLDIPNVELVIHYELPNDAETFVHRSGRTGRAGKEGSAILMFT 462

Query: 1431 SSQRRTVRSLERDVGCRFDFINPPSIEEVLGSSADQVVATLAGVHPESVQYFTPTAQKLM 1252
            +SQRRTVRSLERDVGC+F+FI+ P+IEEVL SSA+Q+VATL GVHP S+++FTPTAQ+L+
Sbjct: 463  NSQRRTVRSLERDVGCKFEFISAPAIEEVLESSAEQIVATLNGVHPHSIEFFTPTAQRLI 522

Query: 1251 DEQGVDALAAALAQLSGFSRPPSSRSLITHEQGWVTLQLTRDSGYSRGFLSARSVTGFLS 1072
            +E+G++ALAAALA LSGFSRPPSSRSLI+HEQG VTLQLTRDS YSRGFLSARSVTGFLS
Sbjct: 523  EEEGINALAAALAHLSGFSRPPSSRSLISHEQGLVTLQLTRDSSYSRGFLSARSVTGFLS 582

Query: 1071 DVYSAAADEVGKIHIVADERVQGAVFDLPEEIAKELLDKQLPPGNTITKVSKLPALQDDG 892
            DVY  AADEVGK++++ADERVQGAVFDLPEEIAKELL+KQ PPGNTI+K++KLP LQDDG
Sbjct: 583  DVYPVAADEVGKVYLIADERVQGAVFDLPEEIAKELLNKQTPPGNTISKITKLPPLQDDG 642

Query: 891  PAGDFYGRFSNRDRGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 712
            P+ D+YG+FS+RDR                                              
Sbjct: 643  PSSDYYGKFSSRDRS-----PRGISKDRRGFRGSRSWSSGRNSDDEVRGGRSSWSRTSKS 697

Query: 711  XXXDWLINDRRSSRSSFGNRDSGFGGACFNCGRTGHRASECPTKQSY 571
               DWLI  RRS RSS  + D  FGG+CFNCGR GHRAS+CP K  +
Sbjct: 698  SRDDWLIGSRRSKRSS--SHDRSFGGSCFNCGRPGHRASDCPEKLDF 742


>ref|XP_003554590.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Glycine max]
          Length = 771

 Score =  955 bits (2468), Expect = 0.0
 Identities = 513/672 (76%), Positives = 565/672 (84%), Gaps = 4/672 (0%)
 Frame = -2

Query: 2847 SSSIIGVSSIYQATPSSLELPKRPTSNSPLSL---PFSDKSHFNGLKSSSSNTHSRFRQS 2677
            +SSIIGVSSIYQ  P  LEL +RP++ S  S+       KSHFN L  +    H      
Sbjct: 2    ASSIIGVSSIYQTPP--LELYQRPSTASTSSVRLQSLDSKSHFNNLLRA----HRHSTGP 55

Query: 2676 AACNGNSFVTSAVVTPNS-VLSEEAFKGFGGFDKDSLDVSENEYETEEDEVAGEIAVENK 2500
                  SFV SAV TPNS +LSEEAFKG         D +++++ T     A  +   N 
Sbjct: 56   GLKPTPSFVPSAVATPNSSLLSEEAFKGLAR----EFDQNDDQF-TRASSAAESV---NP 107

Query: 2499 NELVVSKLGLPQKLVESLEGRGITELFPIQRAVLTPALEGRDIIARAKTGTGKTLAFGIP 2320
            +EL +SKL LP +LVESL  RGIT+LFPIQRAVL PALEGRDIIARAKTGTGKTLAFGIP
Sbjct: 108  DELDISKLDLPSRLVESLRSRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIP 167

Query: 2319 IIKKLTEDXXXXXXXXXXXXXXXXXXXAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYI 2140
            IIK LTED                    PTRELAKQVEKEIKESAPYL+TVCVYGGVSY+
Sbjct: 168  IIKGLTEDEHAPSHRRSGRLPRFLVLA-PTRELAKQVEKEIKESAPYLSTVCVYGGVSYV 226

Query: 2139 TQQNALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADQMLAVGFEEDVEVILEN 1960
            TQQ+ALSRGVDVVVGTPGRIIDLINGNSLKL EVQYLVLDEADQMLAVGFEEDVE+ILEN
Sbjct: 227  TQQSALSRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVEMILEN 286

Query: 1959 LPPERQSMLFSATMPGWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYALQATGTSKRT 1780
            LP +RQSMLFSATMP WVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYA+ AT TSKRT
Sbjct: 287  LPSQRQSMLFSATMPSWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYAIAATATSKRT 346

Query: 1779 ILSDLVTVYAKGGKTIVFTQTKRDADEVSLALTNIIASEALHGDISQHQRERTLNGFRQG 1600
            ILSDLVTVYAKGGKTIVFTQTKRDADEVSL+LTN I SEALHGDISQHQRERTLNGFRQG
Sbjct: 347  ILSDLVTVYAKGGKTIVFTQTKRDADEVSLSLTNSIMSEALHGDISQHQRERTLNGFRQG 406

Query: 1599 KFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQR 1420
            KFTVLVATDVAARGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGK+G+AIL++TSSQR
Sbjct: 407  KFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKQGNAILLYTSSQR 466

Query: 1419 RTVRSLERDVGCRFDFINPPSIEEVLGSSADQVVATLAGVHPESVQYFTPTAQKLMDEQG 1240
            RTVRSLERDVGC+F+F++ P++EEVL +SA+QVVATL GVHPESVQ+FTPTAQKL++EQG
Sbjct: 467  RTVRSLERDVGCKFEFVSSPAMEEVLEASAEQVVATLCGVHPESVQFFTPTAQKLIEEQG 526

Query: 1239 VDALAAALAQLSGFSRPPSSRSLITHEQGWVTLQLTRDSGYSRGFLSARSVTGFLSDVYS 1060
              ALAAALAQLSGFSRPPSSRSLITHEQGW+TLQLTRDS  SR + SARSVTGFLSDVYS
Sbjct: 527  TSALAAALAQLSGFSRPPSSRSLITHEQGWITLQLTRDSD-SRRYFSARSVTGFLSDVYS 585

Query: 1059 AAADEVGKIHIVADERVQGAVFDLPEEIAKELLDKQLPPGNTITKVSKLPALQDDGPAGD 880
            AAADEVGKIH++ADERVQGAVFDLPEEIAKELL++ +PPGNTI+K++KLP LQDDGP  D
Sbjct: 586  AAADEVGKIHLIADERVQGAVFDLPEEIAKELLNRDIPPGNTISKITKLPPLQDDGPPSD 645

Query: 879  FYGRFSNRDRGA 844
            FYGRFS+RDR +
Sbjct: 646  FYGRFSDRDRSS 657