BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00000211
         (1122 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]        327   7e-87
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi...   322   2e-85
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        306   8e-81
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   306   1e-80
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   303   6e-80
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     303   1e-79
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   303   1e-79
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     301   3e-79
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               300   7e-79
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                300   7e-79
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   300   9e-79
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   299   1e-78
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   299   2e-78
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   298   2e-78
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   298   2e-78
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   298   2e-78
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   295   3e-77
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           295   3e-77
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...   294   4e-77
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...   294   4e-77

>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score =  327 bits (837), Expect = 7e-87
 Identities = 159/349 (45%), Positives = 217/349 (62%), Gaps = 3/349 (0%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFKRIKEEKQRKQGKGSDKNDKPHDFESDGNSMYXXXXXXXXXXXXX 860
            CFYC KEGH    CF++ K+E Q K G  +  +D       DG+  Y             
Sbjct: 236  CFYCRKEGHYIRDCFEKKKKESQEKSGDAAVASD-------DGSDGYQSADLLVASNSNT 288

Query: 859  XEHWILDSGCTFHMTPNKHWFSDFKPLDQGKVFMGNNNVCEVKGIGNVFIKMHD---GVT 689
               W++DSGC+FH+ P K  F  ++ +D G+V MGNNNVC + GI   F K       + 
Sbjct: 289  KGQWVIDSGCSFHLCPEKTLFYKYEAVDGGRVLMGNNNVCNIVGIW--FCKRSRCLMELL 346

Query: 688  RKLTEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKGFKRDGLYHLIGK 509
            R L EVR+ P L+RNLISLG+ DS G+ +KS  G ++V KG  +++KG   +GLY L G 
Sbjct: 347  RSLHEVRHAPRLKRNLISLGMLDSLGYFFKSRIGGLEVRKGTEIVMKGVNENGLYVLQGS 406

Query: 508  TILDASALVSKTVPEKTLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLDFCDHCVLGKQ 329
            ++     + + +  ++T LWH R+GH+S KGL  L KQ LLGGD+I+ L+FC++C+ GK 
Sbjct: 407  SVPVQEGVSAVSEEDRTKLWHLRLGHMSIKGLQELSKQGLLGGDRIQQLEFCENCIFGKS 466

Query: 328  HKISFSVGTHKSTSVLDYVHCDLWGPEKVPTYGGNVYFLSVVDDFSRHVWVFLLKSKDQT 149
            H+  F+ G H S  VLDY H D WGP +VP+  G  YF+S++DD+SR VW+++LK KDQ 
Sbjct: 467  HRSKFNKGEHMSKQVLDYAHIDHWGPAQVPSLSGGRYFMSLIDDYSRKVWIYILKIKDQA 526

Query: 148  FEKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
             EKF  WK L ENQ+  KLK +RTDNGLEFC+K F + C  HGI  H+T
Sbjct: 527  LEKFKVWKSLVENQSDFKLKCLRTDNGLEFCSKVFEEYCQKHGIKRHKT 575


>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1335

 Score =  322 bits (824), Expect = 2e-85
 Identities = 156/348 (44%), Positives = 218/348 (62%), Gaps = 2/348 (0%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFKRIKEEKQRKQGKGSDKNDKPHDFESDGNSMYXXXXXXXXXXXXX 860
            C+ CGKEGH K +C+K I+  K ++QG  + ++      E+   +M              
Sbjct: 221  CWICGKEGHFKKQCYKWIERNKSKQQGSDNGESSLAKSTEAFNPAMVLLATDETLVVTDS 280

Query: 859  XEH-WILDSGCTFHMTPNKHWFSDFKPLDQGKVFMGNNNVCEVKGIGNVFIKMHDGVTRK 683
              + W+LD+GC+FHMTP K WF DFK L  G V MGN+    VKGIG++ I+  DG    
Sbjct: 281  IANEWVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKGIGSIKIRNSDGSQVI 340

Query: 682  LTEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKGFKRDGLYHLIGKTI 503
            LT+VRY+P++ RNLISLG  +  G  +KS++G +K+ KG   +LKG KRD LY L G T 
Sbjct: 341  LTDVRYMPNMTRNLISLGTLEDRGCWFKSQDGILKIVKGCSTILKGQKRDTLYILDGVT- 399

Query: 502  LDASALVSKTVPEKTLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLDFCDHCVLGKQHK 323
             +  +  S  V ++T LWH R+GH+S+KG+  L K+  L  + I+ L+FC+ CV GKQH+
Sbjct: 400  EEGESHSSAEVKDETALWHSRLGHMSQKGMEILVKKGCLRREVIKELEFCEDCVYGKQHR 459

Query: 322  ISFSVGTHKSTSVLDYVHCDLWG-PEKVPTYGGNVYFLSVVDDFSRHVWVFLLKSKDQTF 146
            +SF+   H +   L YVH DLWG P    + G + YF+S VDD+SR VW++ L+ KD+ F
Sbjct: 460  VSFAPAQHVTKEKLAYVHSDLWGSPHNPASLGNSQYFISFVDDYSRKVWIYFLRKKDEAF 519

Query: 145  EKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
            EKF EWK++ ENQ+  K+K +RTDNGLE+CN  F   C   GIV H+T
Sbjct: 520  EKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEGIVRHKT 567


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  306 bits (785), Expect = 8e-81
 Identities = 155/357 (43%), Positives = 213/357 (59%), Gaps = 11/357 (3%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFKRIKEEKQRKQGKGSDKNDKPH--------DFESDGNSMYXXXXX 884
            C YC ++GH  +KC+K   ++K ++ GK   K  K          D +SD   +      
Sbjct: 236  CKYCKRDGHDISKCWKL--QDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGC 293

Query: 883  XXXXXXXXXEHWILDSGCTFHMTPNKHWFSDFKPLDQGKVFMGNNNVCEVKGIGNVFIKM 704
                       WILD+ CT+HM PN+ WF+ ++ +  G V MG++  CEV GIG V IKM
Sbjct: 294  AQTSD-----QWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKM 348

Query: 703  HDGVTRKLTEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKG-FKRDGL 527
             DG  R L++VR++P+L+R+LISL   D  G+ Y   +G +KV KG+LV++K   K   L
Sbjct: 349  FDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANL 408

Query: 526  YHLIGKTILDASALVSKTVP--EKTLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLDFC 353
            YHL G TIL   A VS ++   + T LWH R+GH+SE GL  L K+ LL G  I  L FC
Sbjct: 409  YHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSISKLKFC 468

Query: 352  DHCVLGKQHKISFSVGTHKSTSVLDYVHCDLWGPEKVPTYGGNVYFLSVVDDFSRHVWVF 173
            +HC+ GK  ++ F+  TH +  +LDYVH DLWGP +  ++GG  Y +++VDD+SR VW +
Sbjct: 469  EHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPY 528

Query: 172  LLKSKDQTFEKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
             LK K Q F  F EWK + E QT  K+K +RTDNG+EFC+K F   C   GIV H T
Sbjct: 529  FLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYT 585


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  306 bits (783), Expect = 1e-80
 Identities = 150/357 (42%), Positives = 210/357 (58%), Gaps = 11/357 (3%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFKRIKEEK----------QRKQGKGSDKNDKPHDFESDGNSMYXXX 890
            C YC + GH  + C+K   +EK          Q +QGK +   D   D E          
Sbjct: 178  CKYCKRGGHDISDCWKLQNKEKHKGNYKPKGKQEEQGKAAVATDNKPDAE---------L 228

Query: 889  XXXXXXXXXXXEHWILDSGCTFHMTPNKHWFSDFKPLDQGKVFMGNNNVCEVKGIGNVFI 710
                       + W+LD+GCT+HM PN+ WF+ ++P+  G V MG+N  C+V G+G + I
Sbjct: 229  LVAYAGCVQTSDEWLLDTGCTYHMCPNRDWFTTYEPVQGGNVLMGDNTPCKVAGVGTIQI 288

Query: 709  KMHDGVTRKLTEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKG-FKRD 533
            KM DG  R L++VR++P L+RNLISL   D  G+ Y   +G +KV KG+LV++K   K  
Sbjct: 289  KMFDGCIRTLSDVRHIPSLKRNLISLSTLDRKGYRYSGGDGILKVTKGSLVVMKADIKNA 348

Query: 532  GLYHLIGKTILDASALVSKTVPEKTLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLDFC 353
             LYHL G TI+   A V+ ++    L WH R+GH+SE GL  L K+ LL G  I  L FC
Sbjct: 349  DLYHLQGTTIVGNVAAVTDSLSNSDL-WHMRLGHMSEIGLAELSKRGLLDGQNIGKLKFC 407

Query: 352  DHCVLGKQHKISFSVGTHKSTSVLDYVHCDLWGPEKVPTYGGNVYFLSVVDDFSRHVWVF 173
            +HC+ GK  ++ F+  TH +  +LDYVH DLWGP +  ++GG  Y +++VDD+SR VW +
Sbjct: 408  EHCIFGKHKRVKFTTSTHTTEGILDYVHSDLWGPARKRSFGGARYMMTIVDDYSRKVWPY 467

Query: 172  LLKSKDQTFEKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
             LK K + F  F EWK + E QT  K+K +RTDNG+EFC+++F   C   GIV H T
Sbjct: 468  FLKHKFEAFLVFKEWKTMVERQTERKVKVLRTDNGMEFCSRQFKSYCRSEGIVRHYT 524


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  303 bits (777), Expect = 6e-80
 Identities = 144/348 (41%), Positives = 216/348 (62%), Gaps = 2/348 (0%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFKRIKEEKQRKQGKGSDKNDKPHDFESDGNSMYXXXXXXXXXXXXX 860
            C YC ++GH K  C K  K+++  KQ   +   ++  + E D                  
Sbjct: 225  CNYCKEKGHWKFDCPK--KKKQSEKQSVSAAVAEEDTNSEED-------IALVADEHTHH 275

Query: 859  XEHWILDSGCTFHMTPNKHWFSDFKPLDQGKVFMGNNNVCEVKGIGNVFIKMHDGVTRKL 680
             + W+LDSG ++H+ P + WF+ ++ +D G + M N++VC+V G G++ I+ HDG    L
Sbjct: 276  SDVWVLDSGASYHICPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTL 335

Query: 679  TEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKGFKRDGLYHLIGKTIL 500
             EVR+VP + +NLISL + DS GFS+  ++G ++V KG+ ++LKG  R  LY L G T+ 
Sbjct: 336  NEVRHVPLMTKNLISLSLLDSKGFSWSGKDGVLRVWKGSNLILKGVMRGTLYFLQGSTVT 395

Query: 499  DASALVSKTVPEK--TLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLDFCDHCVLGKQH 326
             ++ + S    +K  T LWH R+GH+ E+G+  L K++LL G K++SL+FC+HCV GK H
Sbjct: 396  GSAHVASSEFHQKDMTKLWHIRLGHMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGKLH 455

Query: 325  KISFSVGTHKSTSVLDYVHCDLWGPEKVPTYGGNVYFLSVVDDFSRHVWVFLLKSKDQTF 146
            +  F    H++   LDY+H D WGP +V + GG  +F+S++DD+SR  WV+++K K + F
Sbjct: 456  RNKFPKAIHRTKGTLDYIHSDCWGPCRVESLGGCRFFVSIIDDYSRMTWVYMMKHKSEAF 515

Query: 145  EKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
            +KF EWK L ENQTG K+K +RTDNGLEFC  +F   C   GI  HRT
Sbjct: 516  QKFKEWKILMENQTGKKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRT 563


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  303 bits (775), Expect = 1e-79
 Identities = 152/352 (43%), Positives = 212/352 (60%), Gaps = 6/352 (1%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFKRIKEEKQRKQGKGSDKNDKPHDFES---DGNSMYXXXXXXXXXX 869
            C YC ++GH  ++C+K   ++K ++ GK   K  K  + ++                   
Sbjct: 271  CKYCKRDGHDISECWKL--QDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGC 328

Query: 868  XXXXEHWILDSGCTFHMTPNKHWFSDFKPLDQGKVFMGNNNVCEVKGIGNVFIKMHDGVT 689
                + WILD+  T+HM PN+ WF+ ++ L  G V MG++  CEV GIG V IKM DG  
Sbjct: 329  AQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYI 388

Query: 688  RKLTEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKG-FKRDGLYHLIG 512
            R L++VR++P+L+R+LISL   D  G+ Y   +G +KV KG+LV++K   K   LYHL G
Sbjct: 389  RTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRG 448

Query: 511  KTILDASALVSKTVP--EKTLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLDFCDHCVL 338
             TIL   A VS ++   + T LWH R+GH+SE GL  L K+ LL G  I  L FC+HC+ 
Sbjct: 449  TTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIF 508

Query: 337  GKQHKISFSVGTHKSTSVLDYVHCDLWGPEKVPTYGGNVYFLSVVDDFSRHVWVFLLKSK 158
            GK  ++ F+  TH +  +LDYVH DLWGP    ++GG  Y +++VDD+SR VW + LK K
Sbjct: 509  GKHKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLKHK 568

Query: 157  DQTFEKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
             Q F+ F EWK + E QT  K+K +RTDNG+EFC+K F   C   GIVHH T
Sbjct: 569  YQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYT 620


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  303 bits (775), Expect = 1e-79
 Identities = 152/352 (43%), Positives = 212/352 (60%), Gaps = 6/352 (1%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFKRIKEEKQRKQGKGSDKNDKPHDFES---DGNSMYXXXXXXXXXX 869
            C YC ++GH  ++C+K   ++K ++ GK   K  K  + ++                   
Sbjct: 271  CKYCKRDGHDISECWKL--QDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGC 328

Query: 868  XXXXEHWILDSGCTFHMTPNKHWFSDFKPLDQGKVFMGNNNVCEVKGIGNVFIKMHDGVT 689
                + WILD+  T+HM PN+ WF+ ++ L  G V MG++  CEV GIG V IKM DG  
Sbjct: 329  AQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYI 388

Query: 688  RKLTEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKG-FKRDGLYHLIG 512
            R L++VR++P+L+R+LISL   D  G+ Y   +G +KV KG+LV++K   K   LYHL G
Sbjct: 389  RTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRG 448

Query: 511  KTILDASALVSKTVP--EKTLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLDFCDHCVL 338
             TIL   A VS ++   + T LWH R+GH+SE GL  L K+ LL G  I  L FC+HC+ 
Sbjct: 449  TTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIF 508

Query: 337  GKQHKISFSVGTHKSTSVLDYVHCDLWGPEKVPTYGGNVYFLSVVDDFSRHVWVFLLKSK 158
            GK  ++ F+  TH +  +LDYVH DLWGP    ++GG  Y +++VDD+SR VW + LK K
Sbjct: 509  GKHKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLKHK 568

Query: 157  DQTFEKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
             Q F+ F EWK + E QT  K+K +RTDNG+EFC+K F   C   GIVHH T
Sbjct: 569  YQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYT 620


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  301 bits (771), Expect = 3e-79
 Identities = 152/359 (42%), Positives = 212/359 (59%), Gaps = 13/359 (3%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFKR----------IKEEKQRKQGKGSDKNDKPHDFESDGNSMYXXX 890
            C YC ++GH  ++C+K           I + K+ ++GK +   D+  D E          
Sbjct: 145  CKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEEGKAAVVTDEKSDAE---------L 195

Query: 889  XXXXXXXXXXXEHWILDSGCTFHMTPNKHWFSDFKPLDQGKVFMGNNNVCEVKGIGNVFI 710
                       + WILD+ CT+HM PN+ WF+ ++ +  G V MG++  CEV GIG V I
Sbjct: 196  LVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQI 255

Query: 709  KMHDGVTRKLTEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKG-FKRD 533
            KM DG  R L +VR++P+L+R+LISL   D  G+ Y   +G +KV KG+LV++K   K  
Sbjct: 256  KMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYA 315

Query: 532  GLYHLIGKTILDASALVSKTVP--EKTLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLD 359
             LYHL G TIL   A VS ++   + T LWH R+GH+SE GL  L K+ LL G  I  L 
Sbjct: 316  NLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLK 375

Query: 358  FCDHCVLGKQHKISFSVGTHKSTSVLDYVHCDLWGPEKVPTYGGNVYFLSVVDDFSRHVW 179
            FC+HC+ GK  ++ F+  TH +  +LDYVH DLWGP +  ++GG  Y +++VDD+SR VW
Sbjct: 376  FCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVW 435

Query: 178  VFLLKSKDQTFEKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
             + LK K Q F+ F EWK + E QT  K+K +RTDNG+E C+K F   C   GIV H T
Sbjct: 436  PYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMELCSKIFKSYCKSEGIVRHYT 494


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  300 bits (768), Expect = 7e-79
 Identities = 152/357 (42%), Positives = 212/357 (59%), Gaps = 11/357 (3%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFKRIKEEKQRKQGKGSDKNDKPH--------DFESDGNSMYXXXXX 884
            C YC ++GH  +KC+K   ++K ++ GK   K  K          D +SD   +      
Sbjct: 53   CKYCKRDGHDISKCWKL--QDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDAELLVAYAGC 110

Query: 883  XXXXXXXXXEHWILDSGCTFHMTPNKHWFSDFKPLDQGKVFMGNNNVCEVKGIGNVFIKM 704
                       WILD+ CT+HM PN+ WF+ ++ +  G V MG++  CEV GIG V IKM
Sbjct: 111  AQTSD-----QWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKM 165

Query: 703  HDGVTRKLTEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKG-FKRDGL 527
             DG  R L++VR++P+L+R+LISL   D  G+ Y   +G +KV KG+LV++K   K   L
Sbjct: 166  FDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANL 225

Query: 526  YHLIGKTILDASALVSKTVP--EKTLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLDFC 353
            YHL G TIL   A VS ++   + T LWH R+GH+SE GL  L  + LL G  I  L FC
Sbjct: 226  YHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFC 285

Query: 352  DHCVLGKQHKISFSVGTHKSTSVLDYVHCDLWGPEKVPTYGGNVYFLSVVDDFSRHVWVF 173
            +HC+ GK  ++ F+  TH +  +LDYVH DLWGP +  ++GG  Y +++V+D+SR VW +
Sbjct: 286  EHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVNDYSRKVWPY 345

Query: 172  LLKSKDQTFEKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
             LK K Q F  F EWK + E QT  K+K +RTDNG+EFC+K F   C   GI+ H T
Sbjct: 346  FLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYT 402


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  300 bits (768), Expect = 7e-79
 Identities = 152/357 (42%), Positives = 212/357 (59%), Gaps = 11/357 (3%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFKRIKEEKQRKQGKGSDKNDKPH--------DFESDGNSMYXXXXX 884
            C YC ++GH  +KC+K   ++K ++ GK   K  K          D +SD   +      
Sbjct: 221  CKYCKRDGHDISKCWKL--QDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDAELLVAYAGC 278

Query: 883  XXXXXXXXXEHWILDSGCTFHMTPNKHWFSDFKPLDQGKVFMGNNNVCEVKGIGNVFIKM 704
                       WILD+ CT+HM PN+ WF+ ++ +  G V MG++  CEV GIG V IKM
Sbjct: 279  AQTSD-----QWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKM 333

Query: 703  HDGVTRKLTEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKG-FKRDGL 527
             DG  R L++VR++P+L+R+LISL   D  G+ Y   +G +KV KG+LV++K   K   L
Sbjct: 334  FDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANL 393

Query: 526  YHLIGKTILDASALVSKTVP--EKTLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLDFC 353
            YHL G TIL   A VS ++   + T LWH R+GH+SE GL  L  + LL G  I  L FC
Sbjct: 394  YHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFC 453

Query: 352  DHCVLGKQHKISFSVGTHKSTSVLDYVHCDLWGPEKVPTYGGNVYFLSVVDDFSRHVWVF 173
            +HC+ GK  ++ F+  TH +  +LDYVH DLWGP +  ++GG  Y +++V+D+SR VW +
Sbjct: 454  EHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVNDYSRKVWPY 513

Query: 172  LLKSKDQTFEKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
             LK K Q F  F EWK + E QT  K+K +RTDNG+EFC+K F   C   GI+ H T
Sbjct: 514  FLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYT 570


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  300 bits (767), Expect = 9e-79
 Identities = 153/358 (42%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFKRIKEEKQRKQGKGS------------DKNDKPHDFESDGNSMYX 896
            CF+C ++GH +  C        QR++G GS             K  +  D   +G     
Sbjct: 556  CFHCKEKGHFRKNC-------PQRQKGIGSGVGMEIAQVVVAQKYXEKXDSSDEGEG--- 605

Query: 895  XXXXXXXXXXXXXEHWILDSGCTFHMTPNKHWFSDFKPLDQGKVFMGNNNVCEVKGIGNV 716
                         E WILD+G ++HM  ++  F+ FK  + G V +G++    VKG G+V
Sbjct: 606  -GDVLTVSTSSSAESWILDTGASYHMAYSRDLFTTFKEWN-GSVKLGDDGELGVKGSGSV 663

Query: 715  FIKMHDGVTRKLTEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKGFKR 536
             IKM+DG+ R L    YVP LR+NLIS+G  D NG+++    G ++V KGALV++KG  +
Sbjct: 664  QIKMYDGLVRTLN-AWYVPGLRKNLISVGTLDKNGYTFSGSGGVLRVSKGALVVMKGRLQ 722

Query: 535  DGLYHLIGKTILDASALVSKTVPEKTLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLDF 356
             G+Y L+G ++L  +A+      E   LWHRR+GH+SEKGL  L KQ LL G +   L F
Sbjct: 723  HGIYTLMGSSVLGTAAVEEDNCTE---LWHRRLGHMSEKGLSILSKQGLLSGAETGKLKF 779

Query: 355  CDHCVLGKQHKISFSVGTHKSTSVLDYVHCDLWGPEKVPTYGGNVYFLSVVDDFSRHVWV 176
            C+ CV+GKQ ++ FS+G+H +  VL+Y+H DLWGP  V ++ G  Y+++ +DDFSR VWV
Sbjct: 780  CETCVMGKQRRVKFSMGSHTTNGVLEYIHSDLWGPSPVESHSGCRYYVTFIDDFSRKVWV 839

Query: 175  FLLKSKDQTFEKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
            + LK+KD+ F KF EWK + E +TG  +KT+RTDNGLEFCNK F + C   GIV HRT
Sbjct: 840  YFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRT 897


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  299 bits (766), Expect = 1e-78
 Identities = 155/352 (44%), Positives = 207/352 (58%), Gaps = 6/352 (1%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFK-RIKEEKQRKQGKGSDKNDKPHDFESDGNSMYXXXXXXXXXXXX 863
            C YC  + H  ++C K + KE K +K GK S  +    D +S G+ +             
Sbjct: 232  CVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDS-GDCLVVFAGCVAGHD-- 288

Query: 862  XXEHWILDSGCTFHMTPNKHWFSDFKPLDQGKVF-MGNNNVCEVKGIGNVFIKMHDGVTR 686
                WILDS C+FH+   ++WFS +KP+ +G V  MG++N C + GIG+V IK  DG+TR
Sbjct: 289  ---EWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTR 345

Query: 685  KLTEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKGFKRDG-LYHLIGK 509
             L  VRY+P + RNLISL   D+ G+ Y   +G +KV KG+LV LKG      LY L G 
Sbjct: 346  TLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVLRGC 405

Query: 508  TIL---DASALVSKTVPEKTLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLDFCDHCVL 338
            T+     A+A V+   P KT LWH R+GH+S  G+  L K+NLL G     + FC+HC+ 
Sbjct: 406  TLTGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIKFCEHCIF 465

Query: 337  GKQHKISFSVGTHKSTSVLDYVHCDLWGPEKVPTYGGNVYFLSVVDDFSRHVWVFLLKSK 158
            GK  ++ F+   H +   LDYVH DLWGP K P+ GG  Y L+V+DD+SR VW + LK K
Sbjct: 466  GKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTVIDDYSRKVWPYFLKHK 525

Query: 157  DQTFEKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
            D TF  F  WK + E QT  K+K +RTDNG EFC+  F+D C   GIV H T
Sbjct: 526  DDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHT 577


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  299 bits (765), Expect = 2e-78
 Identities = 154/352 (43%), Positives = 207/352 (58%), Gaps = 6/352 (1%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFK-RIKEEKQRKQGKGSDKNDKPHDFESDGNSMYXXXXXXXXXXXX 863
            C YC  + H  ++C K + KE K +K GK S  +    D +S G+ +             
Sbjct: 232  CVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDS-GDCLVVFAGCVAGHD-- 288

Query: 862  XXEHWILDSGCTFHMTPNKHWFSDFKPLDQGKVF-MGNNNVCEVKGIGNVFIKMHDGVTR 686
                WILDS C+FH+   ++WFS +KP+ +G V  MG++N C + GIG+V IK  DG+TR
Sbjct: 289  ---EWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTR 345

Query: 685  KLTEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKGFKRDG-LYHLIGK 509
             L  VRY+P + RNLISL   D+ G+ Y   +G +KV KG+LV LKG      LY L G 
Sbjct: 346  TLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVLRGC 405

Query: 508  TIL---DASALVSKTVPEKTLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLDFCDHCVL 338
            T+     A+A V+   P KT LWH R+GH+S  G+  L K+NLL G     + FC+HC+ 
Sbjct: 406  TLTGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIKFCEHCIF 465

Query: 337  GKQHKISFSVGTHKSTSVLDYVHCDLWGPEKVPTYGGNVYFLSVVDDFSRHVWVFLLKSK 158
            GK  ++ F+   H +   LDYVH DLWGP K P+ GG  Y L+++DD+SR VW + LK K
Sbjct: 466  GKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHK 525

Query: 157  DQTFEKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
            D TF  F  WK + E QT  K+K +RTDNG EFC+  F+D C   GIV H T
Sbjct: 526  DDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHT 577


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  298 bits (764), Expect = 2e-78
 Identities = 151/357 (42%), Positives = 211/357 (59%), Gaps = 11/357 (3%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFKRIKEEKQRKQGKGSDKNDKPH--------DFESDGNSMYXXXXX 884
            C YC ++GH   +C+K    +K ++ GK   K  K          D +SD   +      
Sbjct: 443  CKYCKRDGHDIFECWKL--HDKDKRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGC 500

Query: 883  XXXXXXXXXEHWILDSGCTFHMTPNKHWFSDFKPLDQGKVFMGNNNVCEVKGIGNVFIKM 704
                       WIL++ C +HM PN+ WF+ ++ +  G V MG++  CEV GIG V IKM
Sbjct: 501  AQTSD-----QWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKM 555

Query: 703  HDGVTRKLTEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKG-FKRDGL 527
             DG  R L++VR++P+L+R+LISL   D  G+ Y   +G +KV KG+LV++K   K   L
Sbjct: 556  FDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANL 615

Query: 526  YHLIGKTILDASALVSKTVP--EKTLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLDFC 353
            YHL G TIL   A VS ++   + T LWH R+GH++E GL  L K+ LL G  I  L FC
Sbjct: 616  YHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFC 675

Query: 352  DHCVLGKQHKISFSVGTHKSTSVLDYVHCDLWGPEKVPTYGGNVYFLSVVDDFSRHVWVF 173
            +HC+ GK  ++ F+  TH +  +LDYVH DLWGP +  ++GG  Y +++VDD+SR VW +
Sbjct: 676  EHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPY 735

Query: 172  LLKSKDQTFEKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
             LK K Q F+ F EWK + E QT  K+K +RTDNG+EFC+K F   C   GIV H T
Sbjct: 736  FLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYT 792


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549942|gb|ABA92739.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1373

 Score =  298 bits (764), Expect = 2e-78
 Identities = 153/352 (43%), Positives = 207/352 (58%), Gaps = 6/352 (1%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFK-RIKEEKQRKQGKGSDKNDKPHDFESDGNSMYXXXXXXXXXXXX 863
            C YC  + H  ++C K + KE K +K GK S  +    D +S G+ +             
Sbjct: 232  CVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDS-GDCLVVFAGCVAGHD-- 288

Query: 862  XXEHWILDSGCTFHMTPNKHWFSDFKPLDQGKVF-MGNNNVCEVKGIGNVFIKMHDGVTR 686
                WILDS C+FH+   ++WFS +KP+ +G V  MG++N C + GIG+V IK  DG+TR
Sbjct: 289  ---EWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTR 345

Query: 685  KLTEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKGFKRDG-LYHLIGK 509
             L  VRY+P + RNLISL   D+ G+ Y   +G +KV KG+LV LKG      LY L G 
Sbjct: 346  TLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDVNSAKLYVLRGC 405

Query: 508  TIL---DASALVSKTVPEKTLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLDFCDHCVL 338
            T+     A+A ++   P KT LWH R+GH+S  G+  L K+NLL G     + FC+HC+ 
Sbjct: 406  TLTGSDSAAAAITNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIKFCEHCIF 465

Query: 337  GKQHKISFSVGTHKSTSVLDYVHCDLWGPEKVPTYGGNVYFLSVVDDFSRHVWVFLLKSK 158
            GK  ++ F+   H +   LDYVH DLWGP K P+ GG  Y L+++DD+SR VW + LK K
Sbjct: 466  GKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHK 525

Query: 157  DQTFEKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
            D TF  F  WK + E QT  K+K +RTDNG EFC+  F+D C   GIV H T
Sbjct: 526  DDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHT 577


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
            gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
            Japonica Group]
          Length = 1601

 Score =  298 bits (764), Expect = 2e-78
 Identities = 151/357 (42%), Positives = 211/357 (59%), Gaps = 11/357 (3%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFKRIKEEKQRKQGKGSDKNDKPH--------DFESDGNSMYXXXXX 884
            C YC ++GH   +C+K    +K ++ GK   K  K          D +SD   +      
Sbjct: 236  CKYCKRDGHDIFECWKL--HDKDKRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGC 293

Query: 883  XXXXXXXXXEHWILDSGCTFHMTPNKHWFSDFKPLDQGKVFMGNNNVCEVKGIGNVFIKM 704
                       WIL++ C +HM PN+ WF+ ++ +  G V MG++  CEV GIG V IKM
Sbjct: 294  AQTSD-----QWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKM 348

Query: 703  HDGVTRKLTEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKG-FKRDGL 527
             DG  R L++VR++P+L+R+LISL   D  G+ Y   +G +KV KG+LV++K   K   L
Sbjct: 349  FDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANL 408

Query: 526  YHLIGKTILDASALVSKTVP--EKTLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLDFC 353
            YHL G TIL   A VS ++   + T LWH R+GH++E GL  L K+ LL G  I  L FC
Sbjct: 409  YHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFC 468

Query: 352  DHCVLGKQHKISFSVGTHKSTSVLDYVHCDLWGPEKVPTYGGNVYFLSVVDDFSRHVWVF 173
            +HC+ GK  ++ F+  TH +  +LDYVH DLWGP +  ++GG  Y +++VDD+SR VW +
Sbjct: 469  EHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPY 528

Query: 172  LLKSKDQTFEKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
             LK K Q F+ F EWK + E QT  K+K +RTDNG+EFC+K F   C   GIV H T
Sbjct: 529  FLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYT 585


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1278

 Score =  295 bits (754), Expect = 3e-77
 Identities = 148/350 (42%), Positives = 205/350 (58%), Gaps = 4/350 (1%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFKRIKEEKQRKQGKGSDKNDKPHDFESDGNSMYXXXXXXXXXXXXX 860
            C YC K+ H   +C+K   +EK++  GK S      +    D   ++             
Sbjct: 236  CKYCKKKIHFIKECWKLQNKEKRKSDGKASVVTSAKNSDSGDCLVVFAGCVASHD----- 290

Query: 859  XEHWILDSGCTFHMTPNKHWFSDFKPLDQGKVF-MGNNNVCEVKGIGNVFIKMHDGVTRK 683
               WILD+ C+FH+  N+ WFS +K +  G V  MGN+N  E+ GIG+V IK HDG+TR 
Sbjct: 291  --EWILDTACSFHIYINRDWFSSYKSVQNGDVVRMGNDNPREIVGIGSVQIKTHDGITRT 348

Query: 682  LTEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKG-FKRDGLYHLIGKT 506
            L +VR++P + RNLISL   D+ G+ Y    G +KV KG+LV + G      LY L G T
Sbjct: 349  LKDVRHIPGMARNLISLSTLDAEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGST 408

Query: 505  ILDA--SALVSKTVPEKTLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLDFCDHCVLGK 332
            +  +  +A V+K  P KT LWH R+GH+SE G+  L K+NLL G    ++ FC+ CV GK
Sbjct: 409  LHGSVTAAAVTKDEPNKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCERCVFGK 468

Query: 331  QHKISFSVGTHKSTSVLDYVHCDLWGPEKVPTYGGNVYFLSVVDDFSRHVWVFLLKSKDQ 152
              ++ F+   H++  +LDYVH DLWGP + P+ GG  Y L+++DD+SR VW + LK KD 
Sbjct: 469  HKRVKFNTSVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDYSRKVWPYFLKHKDD 528

Query: 151  TFEKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
            TF  F EWK + E QT  ++K +RTDN  EFC+  F D C   GIV H T
Sbjct: 529  TFAAFKEWKVMIERQTEKEVKVLRTDNAGEFCSDAFDDYCRKEGIVRHHT 578


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  295 bits (754), Expect = 3e-77
 Identities = 153/352 (43%), Positives = 206/352 (58%), Gaps = 6/352 (1%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFK-RIKEEKQRKQGKGSDKNDKPHDFESDGNSMYXXXXXXXXXXXX 863
            C YC  + H  ++C K + KE K +K GK S  +    D +S G+ +             
Sbjct: 234  CVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAVSDDDS-GDCLVVFAGCVAGHD-- 290

Query: 862  XXEHWILDSGCTFHMTPNKHWFSDFKPLDQGKVF-MGNNNVCEVKGIGNVFIKMHDGVTR 686
                WILDS C+FH+   ++WFS +KP+ +G V  MG++N C + GIG+V IK  DG+TR
Sbjct: 291  ---EWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTR 347

Query: 685  KLTEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKGFKRDG-LYHLIGK 509
             L  VRY+P + RNLISL   D+ G+ Y   +G +KV KG+LV LKG      LY L G 
Sbjct: 348  TLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVLRGC 407

Query: 508  TIL---DASALVSKTVPEKTLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLDFCDHCVL 338
            T+     A+A V+   P KT LWH R+GH+S  G+  L K+NLL G     + FC+HC+ 
Sbjct: 408  TLPGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGYTSSKIKFCEHCIF 467

Query: 337  GKQHKISFSVGTHKSTSVLDYVHCDLWGPEKVPTYGGNVYFLSVVDDFSRHVWVFLLKSK 158
            GK  ++ F+   H +   LDYVH DLWGP K P+ GG  Y L+++DD+SR VW + LK K
Sbjct: 468  GKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHK 527

Query: 157  DQTFEKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
            D TF  F  WK + E QT  K+K + TDNG EFC+  F+D C   GIV H T
Sbjct: 528  DDTFTAFKNWKVMIERQTERKVKLLCTDNGGEFCSHAFNDYCRQEGIVRHHT 579


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1175

 Score =  294 bits (753), Expect = 4e-77
 Identities = 149/350 (42%), Positives = 206/350 (58%), Gaps = 4/350 (1%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFKRIKEEKQRKQGKGSDKNDKPHDFESDGNSMYXXXXXXXXXXXXX 860
            C YC K+ H   +C+K   +EK++  GK S          S  NS               
Sbjct: 131  CKYCKKKNHFIEECWKLQNKEKRKSDGKASVVT-------SADNSDSGDCLVVFVVCVSS 183

Query: 859  XEHWILDSGCTFHMTPNKHWFSDFKPLDQGKVF-MGNNNVCEVKGIGNVFIKMHDGVTRK 683
             + WILD+ C+FH+  N+ WFS +K +  G V  MG++N  E+ GIG+V IK HDG+TR 
Sbjct: 184  HDEWILDTTCSFHICINRDWFSSYKSVQNGDVVRMGDDNPREIVGIGSVQIKTHDGMTRT 243

Query: 682  LTEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKG-FKRDGLYHLIGKT 506
            L +VR++P + RNLISL   D+ G+ Y    G +KV KG+LV + G      LY L G T
Sbjct: 244  LKDVRHIPRMARNLISLSTLDAEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGST 303

Query: 505  ILD--ASALVSKTVPEKTLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLDFCDHCVLGK 332
            +     +A+VSK  P KT +WH R+GH+SE G+  L K+NLL G    ++ FC+HCV GK
Sbjct: 304  LHGYVTAAVVSKDEPSKTNMWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGK 363

Query: 331  QHKISFSVGTHKSTSVLDYVHCDLWGPEKVPTYGGNVYFLSVVDDFSRHVWVFLLKSKDQ 152
              ++ F+   H++  +LDYVH DLWGP + P+ GG  Y L+++DD+SR VW + LK KD 
Sbjct: 364  HKRVKFNTSVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDYSRKVWPYFLKHKDD 423

Query: 151  TFEKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
            TF  F EWK + + QT  ++K +RTDNG  FC+  F D C   GIV H T
Sbjct: 424  TFAAFKEWKVMIKRQTEKEVKVLRTDNGGGFCSDAFDDYCRKEGIVMHHT 473


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
            gi|108708632|gb|ABF96427.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1326

 Score =  294 bits (753), Expect = 4e-77
 Identities = 150/350 (42%), Positives = 204/350 (58%), Gaps = 4/350 (1%)
 Frame = -3

Query: 1039 CFYCGKEGHMKNKCFKRIKEEKQRKQGKGSDKNDKPHDFESDGNSMYXXXXXXXXXXXXX 860
            C YC K+ H   +C+K   +EK++  GK S      +    D   ++             
Sbjct: 236  CKYCKKKNHFIEECWKLQNKEKRKSDGKASVVTSAENSDSGDCLVVFAGCVASHD----- 290

Query: 859  XEHWILDSGCTFHMTPNKHWFSDFKPLDQGKVF-MGNNNVCEVKGIGNVFIKMHDGVTRK 683
               WILD+ C+FH+  N+ WFS +K +  G V  MG++N  E+ GIG+V IK HDG+TR 
Sbjct: 291  --EWILDTACSFHICINRDWFSSYKSVQNGDVVRMGDDNPREIVGIGSVQIKTHDGMTRT 348

Query: 682  LTEVRYVPDLRRNLISLGVFDSNGFSYKSENGTMKVCKGALVMLKG-FKRDGLYHLIGKT 506
            L +VR++P + RNLISL   D+ G+ Y S  G +KV KG+LV + G      LY L G T
Sbjct: 349  LKDVRHIPGMARNLISLSTLDAEGYKYSSSGGVVKVSKGSLVYMIGDMNSANLYVLRGST 408

Query: 505  ILDA--SALVSKTVPEKTLLWHRRIGHISEKGLHCLHKQNLLGGDKIESLDFCDHCVLGK 332
            +  +  +A VSK  P KT LWH R+GH+SE G+  L K+NLL G     + FC+HCV GK
Sbjct: 409  LHGSVTAAAVSKDEPIKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGKMKFCEHCVFGK 468

Query: 331  QHKISFSVGTHKSTSVLDYVHCDLWGPEKVPTYGGNVYFLSVVDDFSRHVWVFLLKSKDQ 152
              ++ F+   H++  +LDYVH DLWGP +    GG  Y L+++DD+SR VW + LK KD 
Sbjct: 469  HKRVKFNTSVHRTKGILDYVHTDLWGPSRKAYLGGARYMLTIIDDYSRKVWPYFLKHKDD 528

Query: 151  TFEKFSEWKRLAENQTGNKLKTIRTDNGLEFCNKKFSDLCALHGIVHHRT 2
            TF  F EWK   E QT  ++K +RTDNG EFC+  F D C   GIV H T
Sbjct: 529  TFAAFKEWKVRIERQTEKEVKVLRTDNGGEFCSDAFDDYCRKEGIVRHHT 578