BLASTX nr result
ID: Catharanthus22_contig00000200
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00000200
(1442 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004146391.1| PREDICTED: chloroplast stem-loop binding pro... 683 0.0
ref|XP_006417582.1| hypothetical protein EUTSA_v10007937mg [Eutr... 674 0.0
dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila] 672 0.0
gb|EOY11711.1| Chloroplast RNA binding [Theobroma cacao] 671 0.0
ref|XP_006305088.1| hypothetical protein CARUB_v10009455mg [Caps... 670 0.0
ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putativ... 669 0.0
ref|XP_006347295.1| PREDICTED: chloroplast stem-loop binding pro... 669 0.0
gb|AFK36692.1| unknown [Medicago truncatula] 667 0.0
ref|XP_002889743.1| catalytic/ coenzyme binding protein [Arabido... 667 0.0
ref|NP_172405.1| chloroplast stem-loop binding protein [Arabidop... 667 0.0
ref|XP_004241412.1| PREDICTED: chloroplast stem-loop binding pro... 667 0.0
gb|EXB53004.1| hypothetical protein L484_018888 [Morus notabilis] 666 0.0
gb|ESW35301.1| hypothetical protein PHAVU_001G223800g [Phaseolus... 666 0.0
emb|CAA71589.1| g5bf [Arabidopsis thaliana] 666 0.0
ref|XP_003554610.1| PREDICTED: chloroplast stem-loop binding pro... 666 0.0
gb|AAL32648.1| g5bf protein [Arabidopsis thaliana] 665 0.0
ref|XP_004302291.1| PREDICTED: chloroplast stem-loop binding pro... 665 0.0
gb|AAM65150.1| putative RNA-binding protein [Arabidopsis thaliana] 665 0.0
ref|XP_006604786.1| PREDICTED: chloroplast stem-loop binding pro... 664 0.0
ref|XP_002281395.1| PREDICTED: uncharacterized protein At1g09340... 664 0.0
>ref|XP_004146391.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like [Cucumis sativus]
gi|449480815|ref|XP_004156003.1| PREDICTED: chloroplast
stem-loop binding protein of 41 kDa b, chloroplastic-like
[Cucumis sativus]
Length = 383
Score = 683 bits (1762), Expect = 0.0
Identities = 334/376 (88%), Positives = 353/376 (93%)
Frame = -3
Query: 1299 MVVLQQKQPSFSVLPSSLSEFSGVRLTASVQYKKKVWQPKGALHVSASAAKKILIMGGTR 1120
M QK SFSVLPSSLS+F+G RL A VQYK+KV QPKG LHV+ASA K ILIMGGTR
Sbjct: 8 MAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIMGGTR 67
Query: 1119 FIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKDFDFVK 940
FIG+FLSRLLVKEGHQVTLFTRGKAP+TQQLP ES+ADYADFKSKILHLKGDRKDFDFVK
Sbjct: 68 FIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVK 127
Query: 939 SSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEVDAVDP 760
SSLSA GFDVVYDINGREADEV PI+DALP LEQFIYCSSAGVYLK+D LPH+EVDAVDP
Sbjct: 128 SSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDP 187
Query: 759 KSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQ 580
KSRHKGKLETESLL ++DVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQ
Sbjct: 188 KSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQ 247
Query: 579 ITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPEIVHYN 400
ITQLGHVKDLA AF++VLGN+KAS+QVFNISG+KYV+FDGLAKACAKAGGFPEPEIVHYN
Sbjct: 248 ITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYN 307
Query: 399 PKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTFRKEAD 220
PKEFDFGKKK FPFRDQHFFASIEKAKSVLGWKPEFDLVEGL DSY LDFGRGTFRKEAD
Sbjct: 308 PKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEAD 367
Query: 219 FSTDDIILGKSLVLQS 172
FSTDDIILGKSLVLQ+
Sbjct: 368 FSTDDIILGKSLVLQA 383
>ref|XP_006417582.1| hypothetical protein EUTSA_v10007937mg [Eutrema salsugineum]
gi|557095353|gb|ESQ35935.1| hypothetical protein
EUTSA_v10007937mg [Eutrema salsugineum]
Length = 379
Score = 674 bits (1739), Expect = 0.0
Identities = 325/379 (85%), Positives = 357/379 (94%)
Frame = -3
Query: 1308 MASMVVLQQKQPSFSVLPSSLSEFSGVRLTASVQYKKKVWQPKGALHVSASAAKKILIMG 1129
MA M++LQQ QPSFS+L SSLS+F+G +L VQYK+KV+QPKGAL+VSAS+ KKILIMG
Sbjct: 1 MAKMMMLQQSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPKGALYVSASSEKKILIMG 60
Query: 1128 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKDFD 949
GTRFIGVFLSRLLVKEGHQVTLFTRGK+PI +QLP ESD D+ADF SKILHLKGDRKD+D
Sbjct: 61 GTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120
Query: 948 FVKSSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEVDA 769
FVKSSLSAEGFDVVYDINGREA+EV PI+DALP LEQ+IYCSSAGVYLK+D LPH EVDA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEVDA 180
Query: 768 VDPKSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 589
VDPKSRHKGKLETESLL+++ VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNS
Sbjct: 181 VDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNS 240
Query: 588 GIQITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPEIV 409
GIQI+QLGHVKDLATAF+ VLGNEKAS+++FNISG+KYVTFDGLA+ACAKAGGFPEPEIV
Sbjct: 241 GIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEIV 300
Query: 408 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTFRK 229
HYNPKEFDFGKKKAFPFRDQHFFAS+EKAK VLGWKPEFDLVEGLTDSY LDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 228 EADFSTDDIILGKSLVLQS 172
EADF+TDD+IL K LVLQS
Sbjct: 361 EADFTTDDMILSKKLVLQS 379
>dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]
Length = 379
Score = 672 bits (1734), Expect = 0.0
Identities = 323/379 (85%), Positives = 357/379 (94%)
Frame = -3
Query: 1308 MASMVVLQQKQPSFSVLPSSLSEFSGVRLTASVQYKKKVWQPKGALHVSASAAKKILIMG 1129
MA +++LQQ QPSFS+L SSLS+F+G +L VQYK+KV+QPKGAL+VSAS+ KKILIMG
Sbjct: 1 MAKIMMLQQSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPKGALYVSASSEKKILIMG 60
Query: 1128 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKDFD 949
GTRFIGVFLSRLLVKEGHQVTLFTRGK+PI +QLP ESD D+ADF SKILHLKGDRKD+D
Sbjct: 61 GTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120
Query: 948 FVKSSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEVDA 769
FVKSSLSAEGFDVVYDINGREA+EV PI+DALP LEQ+IYCSSAGVYLK+D LPH EVDA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEVDA 180
Query: 768 VDPKSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 589
VDPKSRHKGKLETESLL+++ VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNS
Sbjct: 181 VDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNS 240
Query: 588 GIQITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPEIV 409
GIQI+QLGHVKDLATAF+ VLGNEKAS+++FNISG+KY+TFDGLA+ACAKAGGFPEPEIV
Sbjct: 241 GIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYITFDGLARACAKAGGFPEPEIV 300
Query: 408 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTFRK 229
HYNPKEFDFGKKKAFPFRDQHFFAS+EKAK VLGWKPEFDLVEGLTDSY LDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 228 EADFSTDDIILGKSLVLQS 172
EADF+TDD+IL K LVLQS
Sbjct: 361 EADFTTDDMILSKKLVLQS 379
>gb|EOY11711.1| Chloroplast RNA binding [Theobroma cacao]
Length = 379
Score = 671 bits (1731), Expect = 0.0
Identities = 327/380 (86%), Positives = 355/380 (93%), Gaps = 1/380 (0%)
Frame = -3
Query: 1308 MASMVVLQQ-KQPSFSVLPSSLSEFSGVRLTASVQYKKKVWQPKGALHVSASAAKKILIM 1132
M+ +VV Q KQPS S+LPSSLS+FSG +L QYK+KVWQPKGALHV+A++ KKIL+M
Sbjct: 1 MSKLVVFQPTKQPSISLLPSSLSDFSGTKL-CQFQYKRKVWQPKGALHVAAASTKKILVM 59
Query: 1131 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKDF 952
GGTRFIG+FLSRLLVKEGHQVTLFTRGKAPITQQLP E D++Y+DFKSKILHLKGDRKDF
Sbjct: 60 GGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDSEYSDFKSKILHLKGDRKDF 119
Query: 951 DFVKSSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEVD 772
+FVKSSLSAEGFDVVYDINGREADEV PILDALPNLEQ+IYCSSAGVYLK+D LPH E D
Sbjct: 120 EFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKSDLLPHCETD 179
Query: 771 AVDPKSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 592
AVDPKSRHKGKL TE+LL +R VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN
Sbjct: 180 AVDPKSRHKGKLNTENLLASRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 239
Query: 591 SGIQITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPEI 412
SG+QITQLGHVKDLA AFI+VLGNEKASKQVFNISG+KYVTFDGLA+ACAKA GFPEPEI
Sbjct: 240 SGVQITQLGHVKDLAKAFIQVLGNEKASKQVFNISGEKYVTFDGLARACAKAAGFPEPEI 299
Query: 411 VHYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTFR 232
VHYNPKEFDFGKKKAFPFRDQHFFASIEKAK VLGW+PEFDLVEGL DSY LDFGRGT+R
Sbjct: 300 VHYNPKEFDFGKKKAFPFRDQHFFASIEKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYR 359
Query: 231 KEADFSTDDIILGKSLVLQS 172
KEADFSTDD+ILGK+LVLQS
Sbjct: 360 KEADFSTDDMILGKTLVLQS 379
>ref|XP_006305088.1| hypothetical protein CARUB_v10009455mg [Capsella rubella]
gi|482573799|gb|EOA37986.1| hypothetical protein
CARUB_v10009455mg [Capsella rubella]
Length = 379
Score = 670 bits (1728), Expect = 0.0
Identities = 324/379 (85%), Positives = 355/379 (93%)
Frame = -3
Query: 1308 MASMVVLQQKQPSFSVLPSSLSEFSGVRLTASVQYKKKVWQPKGALHVSASAAKKILIMG 1129
MA M++LQQ QPSFS+L SSLS+F+G +L VQYK+KV QPKGAL+VSAS+ KKILIMG
Sbjct: 1 MAKMMMLQQHQPSFSLLNSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMG 60
Query: 1128 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKDFD 949
GTRFIGVFLSRLLVKEGHQVTLFTRGK PI +QLP ESD D+ADF SKILHLKGDRKD+D
Sbjct: 61 GTRFIGVFLSRLLVKEGHQVTLFTRGKTPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120
Query: 948 FVKSSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEVDA 769
FVKSSLSAEGFDVVYDINGREA+EV PI++ALP LEQ+IYCSSAGVYLK+D LPH E DA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPIIEALPKLEQYIYCSSAGVYLKSDILPHCEEDA 180
Query: 768 VDPKSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 589
VDPKSRHKGKLETESLL+++ VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNS
Sbjct: 181 VDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNS 240
Query: 588 GIQITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPEIV 409
GIQI+QLGHVKDLATAF+KVLGNEKAS+++FNISG+KYVTFDGLA+ACAKAGGFPEPEIV
Sbjct: 241 GIQISQLGHVKDLATAFLKVLGNEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEIV 300
Query: 408 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTFRK 229
HYNPKEFDFGKKKAFPFRDQHFFAS+EKAK VLGWKPEFDLVEGLTDSY LDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 228 EADFSTDDIILGKSLVLQS 172
EADF+TDD+IL K LVLQS
Sbjct: 361 EADFTTDDMILSKKLVLQS 379
>ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
gi|223548502|gb|EEF49993.1| NAD dependent
epimerase/dehydratase, putative [Ricinus communis]
Length = 381
Score = 669 bits (1727), Expect = 0.0
Identities = 330/381 (86%), Positives = 356/381 (93%), Gaps = 2/381 (0%)
Frame = -3
Query: 1308 MASMVVLQQK-QPSFSVLPSSLS-EFSGVRLTASVQYKKKVWQPKGALHVSASAAKKILI 1135
MA ++ +QQ+ QPSFS+L SSLS +F+G RL +Q K++VWQ KGAL V+AS++K ILI
Sbjct: 1 MARLITIQQQTQPSFSLLTSSLSSDFNGTRLHTQIQCKRRVWQAKGALQVTASSSKNILI 60
Query: 1134 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKD 955
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQ+LP ESD DYADF SK+LHLKGDRKD
Sbjct: 61 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQKLPGESDQDYADFSSKVLHLKGDRKD 120
Query: 954 FDFVKSSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEV 775
FDFVKSSLSA+GFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLK+D LPH E
Sbjct: 121 FDFVKSSLSAKGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKSDLLPHSEK 180
Query: 774 DAVDPKSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 595
DAVDPKSRHKGKLETESLLE+ VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 DAVDPKSRHKGKLETESLLESSGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 240
Query: 594 NSGIQITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPE 415
NSGIQITQLGHVKDLA AFI+VLGNEKASKQVFNISG+KYVTFDGLA+ACAKAGGFPEPE
Sbjct: 241 NSGIQITQLGHVKDLAKAFIQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPE 300
Query: 414 IVHYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTF 235
IVHYNPKEFDFGKKKAFPFRDQHFFAS++KAK VLGW+PEFDLVEGL DSY LDFGRGTF
Sbjct: 301 IVHYNPKEFDFGKKKAFPFRDQHFFASVDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTF 360
Query: 234 RKEADFSTDDIILGKSLVLQS 172
RKEADF+TDD+ILGKSLVLQS
Sbjct: 361 RKEADFTTDDMILGKSLVLQS 381
>ref|XP_006347295.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like [Solanum tuberosum]
Length = 379
Score = 669 bits (1726), Expect = 0.0
Identities = 327/379 (86%), Positives = 352/379 (92%)
Frame = -3
Query: 1308 MASMVVLQQKQPSFSVLPSSLSEFSGVRLTASVQYKKKVWQPKGALHVSASAAKKILIMG 1129
MAS+V +Q KQPSFSVLPSS S+F+G RL +S QYK+K KGAL V+AS+ KKILIMG
Sbjct: 1 MASLVAIQPKQPSFSVLPSSHSDFNGARLISSFQYKRKPCLSKGALQVTASSEKKILIMG 60
Query: 1128 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKDFD 949
GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI+QQLP ESD DYADF SK+LHLKGDR DFD
Sbjct: 61 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDQDYADFSSKLLHLKGDRMDFD 120
Query: 948 FVKSSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEVDA 769
FVKSSLSAEG+DVVYDINGREA EV PILDALPNLEQ+IYCSSAGVYLKTDYLPH+EVDA
Sbjct: 121 FVKSSLSAEGYDVVYDINGREATEVEPILDALPNLEQYIYCSSAGVYLKTDYLPHFEVDA 180
Query: 768 VDPKSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 589
DPKSRHKGKLETESLL +RDVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS
Sbjct: 181 GDPKSRHKGKLETESLLVSRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 240
Query: 588 GIQITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPEIV 409
G+QITQLGHVKDLA AF++VLGNEKASKQVFNISG+KYVTFDGLAKACAKAGGFPEPE+V
Sbjct: 241 GMQITQLGHVKDLAKAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAGGFPEPELV 300
Query: 408 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTFRK 229
HYNPKEFDFGKKKAFPFRDQHFF SIEK+K++LGWKP+FDLVEGLTDSY LDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFTSIEKSKALLGWKPDFDLVEGLTDSYNLDFGRGTFRK 360
Query: 228 EADFSTDDIILGKSLVLQS 172
ADFSTDD+IL K LV QS
Sbjct: 361 AADFSTDDMILEKKLVPQS 379
>gb|AFK36692.1| unknown [Medicago truncatula]
Length = 378
Score = 667 bits (1722), Expect = 0.0
Identities = 325/376 (86%), Positives = 350/376 (93%)
Frame = -3
Query: 1308 MASMVVLQQKQPSFSVLPSSLSEFSGVRLTASVQYKKKVWQPKGALHVSASAAKKILIMG 1129
MA +V LQQ Q SF L SSLS+F+G RL +Q K+K WQPKG+L VSAS+ KKILIMG
Sbjct: 1 MARLVALQQNQLSFPPLASSLSDFNGARLQTHIQLKRKTWQPKGSLIVSASSTKKILIMG 60
Query: 1128 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKDFD 949
GTRFIGVFLSR LVKEGHQVTLFTRGKAPITQQLP ESD D+ADF SKILHLKGDRKD+D
Sbjct: 61 GTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRKDYD 120
Query: 948 FVKSSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEVDA 769
FVKSSLSAEGFDVVYDINGREA+EV PILDALPNLEQFIYCSSAGVYLK+D LPH E+DA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEIDA 180
Query: 768 VDPKSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 589
VDPKSRHKGKLETESLL+++DVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP S
Sbjct: 181 VDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGS 240
Query: 588 GIQITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPEIV 409
GIQITQLGHVKDLATAF+KVLGNEKASKQ+FNISGDKYVTFDGLA+ACAKAGGFPEPEI+
Sbjct: 241 GIQITQLGHVKDLATAFLKVLGNEKASKQIFNISGDKYVTFDGLARACAKAGGFPEPEII 300
Query: 408 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTFRK 229
HYNPK+FDFGKKK+FPFRDQHFFAS+EKAKSVLG +P++ LVEGLTDSY LDFGRGTFRK
Sbjct: 301 HYNPKDFDFGKKKSFPFRDQHFFASVEKAKSVLGLEPDYGLVEGLTDSYNLDFGRGTFRK 360
Query: 228 EADFSTDDIILGKSLV 181
EADFSTDDIILGKSLV
Sbjct: 361 EADFSTDDIILGKSLV 376
>ref|XP_002889743.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp.
lyrata] gi|297335585|gb|EFH66002.1| catalytic/ coenzyme
binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 378
Score = 667 bits (1722), Expect = 0.0
Identities = 322/378 (85%), Positives = 352/378 (93%)
Frame = -3
Query: 1308 MASMVVLQQKQPSFSVLPSSLSEFSGVRLTASVQYKKKVWQPKGALHVSASAAKKILIMG 1129
MA M++LQQ QPSFS+L SSLS+F+G +L VQYK+KV QPKGALHVSAS+ KKILIMG
Sbjct: 1 MAKMMMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALHVSASSEKKILIMG 60
Query: 1128 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKDFD 949
GTRFIGVFLSRLLVK GHQVTLFTRGK+PI +QLP ESD D+ADF SKILHLKGDRKD+D
Sbjct: 61 GTRFIGVFLSRLLVKGGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120
Query: 948 FVKSSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEVDA 769
FVKSSLSAEGFDVVYDINGREA+EV PI+DALP LEQ+IYCSSAGVYLK+D LPH E DA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEEDA 180
Query: 768 VDPKSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 589
VDPKSRHKGKLETESLL+++ VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNS
Sbjct: 181 VDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNS 240
Query: 588 GIQITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPEIV 409
GIQI+QLGHVKDL TAF+ VLGNEKAS+++FNISG+KYVTFDGLAKACAKAGGFPEPEIV
Sbjct: 241 GIQISQLGHVKDLGTAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEIV 300
Query: 408 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTFRK 229
HYNPKEFDFGKKKAFPFRDQHFFAS+EKAK VLGWKPEFDLVEGLTDSY LDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 228 EADFSTDDIILGKSLVLQ 175
EADF+TDD++L K LVLQ
Sbjct: 361 EADFTTDDMVLSKKLVLQ 378
>ref|NP_172405.1| chloroplast stem-loop binding protein [Arabidopsis thaliana]
gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName:
Full=Chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic; Short=CSP41-b; AltName:
Full=Heteroglycan-interacting protein 1.3; AltName:
Full=Protein CHLOROPLAST RNA BINDING; AltName:
Full=Protein Gb5f; Flags: Precursor
gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340
[Arabidopsis thaliana]
gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6
[Arabidopsis thaliana] gi|4337177|gb|AAD18098.1|
Identical to gb|Y10557 g5bf gene from Arabidopsis
thaliana. ESTs gb|R30578, gb|R90475, gb|T22384,
gb|T22425, gb|N64934 and gb|T46767 come from this gene
[Arabidopsis thaliana] gi|14334754|gb|AAK59555.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|17979099|gb|AAL47493.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|332190310|gb|AEE28431.1|
chloroplast stem-loop binding protein [Arabidopsis
thaliana]
Length = 378
Score = 667 bits (1721), Expect = 0.0
Identities = 322/378 (85%), Positives = 354/378 (93%)
Frame = -3
Query: 1308 MASMVVLQQKQPSFSVLPSSLSEFSGVRLTASVQYKKKVWQPKGALHVSASAAKKILIMG 1129
MA M++LQQ QPSFS+L SSLS+F+G +L VQYK+KV QPKGAL+VSAS+ KKILIMG
Sbjct: 1 MAKMMMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMG 60
Query: 1128 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKDFD 949
GTRFIG+FLSR+LVKEGHQVTLFTRGK+PI +QLP ESD D+ADF SKILHLKGDRKD+D
Sbjct: 61 GTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120
Query: 948 FVKSSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEVDA 769
FVKSSLSAEGFDVVYDINGREA+EV PIL+ALP LEQ+IYCSSAGVYLK+D LPH E DA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDA 180
Query: 768 VDPKSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 589
VDPKSRHKGKLETESLL+++ VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNS
Sbjct: 181 VDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNS 240
Query: 588 GIQITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPEIV 409
GIQI+QLGHVKDLATAF+ VLGNEKAS+++FNISG+KYVTFDGLAKACAKAGGFPEPEIV
Sbjct: 241 GIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEIV 300
Query: 408 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTFRK 229
HYNPKEFDFGKKKAFPFRDQHFFAS+EKAK VLGWKPEFDLVEGLTDSY LDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 228 EADFSTDDIILGKSLVLQ 175
EADF+TDD+IL K LVLQ
Sbjct: 361 EADFTTDDMILSKKLVLQ 378
>ref|XP_004241412.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like [Solanum lycopersicum]
Length = 379
Score = 667 bits (1720), Expect = 0.0
Identities = 326/379 (86%), Positives = 351/379 (92%)
Frame = -3
Query: 1308 MASMVVLQQKQPSFSVLPSSLSEFSGVRLTASVQYKKKVWQPKGALHVSASAAKKILIMG 1129
MAS+V +Q KQPSFS+LPSS S+F+G RL +S QYK+K KGAL V+AS+ KKILIMG
Sbjct: 1 MASLVAIQPKQPSFSLLPSSNSDFNGARLISSFQYKRKPCLSKGALQVTASSEKKILIMG 60
Query: 1128 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKDFD 949
GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI+QQLP ESD DYADF SK+LHLKGDR DFD
Sbjct: 61 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDQDYADFSSKLLHLKGDRMDFD 120
Query: 948 FVKSSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEVDA 769
FVKSSLSAEG+DVVYDINGREA EV PILDALPNLEQ+IYCSSAGVYLKTDYLPH+EVDA
Sbjct: 121 FVKSSLSAEGYDVVYDINGREATEVEPILDALPNLEQYIYCSSAGVYLKTDYLPHFEVDA 180
Query: 768 VDPKSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 589
DPKSRHKGKLETESLL +RDVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS
Sbjct: 181 GDPKSRHKGKLETESLLVSRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 240
Query: 588 GIQITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPEIV 409
G+QITQLGHVKDLA AF++VLGNEKASKQVFNISG+KYVTFDGLAKACAKAGGFPEPE+V
Sbjct: 241 GMQITQLGHVKDLAKAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAGGFPEPELV 300
Query: 408 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTFRK 229
HYNPKEFDFGKKKAFPFRDQHFF SIEK+K+ LGWKP+FDLVEGLTDSY LDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFTSIEKSKAELGWKPDFDLVEGLTDSYNLDFGRGTFRK 360
Query: 228 EADFSTDDIILGKSLVLQS 172
ADFSTDD+IL K LV QS
Sbjct: 361 AADFSTDDMILEKKLVPQS 379
>gb|EXB53004.1| hypothetical protein L484_018888 [Morus notabilis]
Length = 380
Score = 666 bits (1718), Expect = 0.0
Identities = 328/376 (87%), Positives = 350/376 (93%)
Frame = -3
Query: 1299 MVVLQQKQPSFSVLPSSLSEFSGVRLTASVQYKKKVWQPKGALHVSASAAKKILIMGGTR 1120
MVV QQ + S+LPSSLS+F+G +L A VQ+KK+ QPKGAL V+AS+ KKILIMGGTR
Sbjct: 5 MVVQQQHKTPLSLLPSSLSDFNGTKLHAQVQFKKRDSQPKGALQVTASSTKKILIMGGTR 64
Query: 1119 FIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKDFDFVK 940
FIGVFLSRLLVKEGHQVTLFTRGKAPI+QQLP ESDADY DF SKILHLKGDRKD D VK
Sbjct: 65 FIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDADYTDFSSKILHLKGDRKDSDVVK 124
Query: 939 SSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEVDAVDP 760
S LSAEGFDVVYDINGREADEVAPILDALPNLEQ+IYCSSAGVYLK+D LPH+E DAVDP
Sbjct: 125 SGLSAEGFDVVYDINGREADEVAPILDALPNLEQYIYCSSAGVYLKSDLLPHFETDAVDP 184
Query: 759 KSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQ 580
KSRHKGKLETESLL R VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQ
Sbjct: 185 KSRHKGKLETESLLALRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQ 244
Query: 579 ITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPEIVHYN 400
ITQLGHVKDLA AF++VLGNEKASKQVFNISG+KYVTFDGLA+ACAKAGGFPEPEI+HYN
Sbjct: 245 ITQLGHVKDLARAFVQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPEIIHYN 304
Query: 399 PKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTFRKEAD 220
PKEFDFGKKKAFPFRDQHFFAS+EKAKSVLG+KPEFDLVEGL DSY LDFGRGT+RKEAD
Sbjct: 305 PKEFDFGKKKAFPFRDQHFFASVEKAKSVLGFKPEFDLVEGLADSYILDFGRGTYRKEAD 364
Query: 219 FSTDDIILGKSLVLQS 172
FSTDDIILGKSLVLQS
Sbjct: 365 FSTDDIILGKSLVLQS 380
>gb|ESW35301.1| hypothetical protein PHAVU_001G223800g [Phaseolus vulgaris]
Length = 378
Score = 666 bits (1718), Expect = 0.0
Identities = 322/376 (85%), Positives = 350/376 (93%)
Frame = -3
Query: 1308 MASMVVLQQKQPSFSVLPSSLSEFSGVRLTASVQYKKKVWQPKGALHVSASAAKKILIMG 1129
MA +V LQQ Q SFS L SSLS+FSG RL +Q K+K+WQPKG+ +VSAS+ KKILIMG
Sbjct: 1 MARLVALQQNQLSFSPLASSLSDFSGTRLPTQLQLKRKLWQPKGSFYVSASSTKKILIMG 60
Query: 1128 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKDFD 949
GTRFIGVFLSRLLVKEGHQVTLFTRGK P+TQQLP ESD+DYADF SKILHLKGDRKDF+
Sbjct: 61 GTRFIGVFLSRLLVKEGHQVTLFTRGKTPVTQQLPGESDSDYADFSSKILHLKGDRKDFE 120
Query: 948 FVKSSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEVDA 769
FVKSSLSAEGF+VVYDINGREADEV PILDALPNLEQFIYCSSAGVYLK+D LPH E DA
Sbjct: 121 FVKSSLSAEGFEVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAETDA 180
Query: 768 VDPKSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 589
VDPKSRHKGKLETESLL+++DVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP+S
Sbjct: 181 VDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPSS 240
Query: 588 GIQITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPEIV 409
GIQITQLGHVKDLA AF++VLGN+KASK+VFNISG+KYVTFDGLAKACAKAGGFPEPE+V
Sbjct: 241 GIQITQLGHVKDLARAFVQVLGNDKASKEVFNISGEKYVTFDGLAKACAKAGGFPEPELV 300
Query: 408 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTFRK 229
HYNPK+FDFGKKK+FPFRDQHFFASIEKAK ++GW+PEFDLV GL DSY LDFGRGTFRK
Sbjct: 301 HYNPKDFDFGKKKSFPFRDQHFFASIEKAKRLVGWEPEFDLVGGLADSYNLDFGRGTFRK 360
Query: 228 EADFSTDDIILGKSLV 181
EADFSTDDIILGK LV
Sbjct: 361 EADFSTDDIILGKKLV 376
>emb|CAA71589.1| g5bf [Arabidopsis thaliana]
Length = 378
Score = 666 bits (1718), Expect = 0.0
Identities = 322/378 (85%), Positives = 353/378 (93%)
Frame = -3
Query: 1308 MASMVVLQQKQPSFSVLPSSLSEFSGVRLTASVQYKKKVWQPKGALHVSASAAKKILIMG 1129
MA M++LQQ QPSFS+L SSLS+F+G +L VQYK+KV QPKGAL+VSAS+ KKILIMG
Sbjct: 1 MAKMMMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMG 60
Query: 1128 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKDFD 949
GTRFIG+FLSR+LVKEGHQVTLFTRGK+PI +QLP ESD D+ADF SKILHLKGDRKD+D
Sbjct: 61 GTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120
Query: 948 FVKSSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEVDA 769
FVKSSLSAEGFDVVYDINGREA+EV PIL+ALP LEQ+IYCSSAGVYLK D LPH E DA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKFDILPHCEEDA 180
Query: 768 VDPKSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 589
VDPKSRHKGKLETESLL+++ VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNS
Sbjct: 181 VDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNS 240
Query: 588 GIQITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPEIV 409
GIQI+QLGHVKDLATAF+ VLGNEKAS+++FNISG+KYVTFDGLAKACAKAGGFPEPEIV
Sbjct: 241 GIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEIV 300
Query: 408 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTFRK 229
HYNPKEFDFGKKKAFPFRDQHFFAS+EKAK VLGWKPEFDLVEGLTDSY LDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 228 EADFSTDDIILGKSLVLQ 175
EADF+TDD+IL K LVLQ
Sbjct: 361 EADFTTDDMILSKKLVLQ 378
>ref|XP_003554610.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like isoform X1 [Glycine max]
Length = 378
Score = 666 bits (1718), Expect = 0.0
Identities = 326/376 (86%), Positives = 349/376 (92%)
Frame = -3
Query: 1308 MASMVVLQQKQPSFSVLPSSLSEFSGVRLTASVQYKKKVWQPKGALHVSASAAKKILIMG 1129
MA +V LQQ Q SFS L SSL +FSG RL +Q+K+K+ PKG+ +VSAS+ KKILIMG
Sbjct: 1 MARVVALQQNQLSFSPLASSLFDFSGTRLQTQLQFKRKLCHPKGSFYVSASSTKKILIMG 60
Query: 1128 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKDFD 949
GTRFIGVFLSRLLVKEGHQVTLFTRGKAP+TQQLP ESD DYADF SKILHLKGDRKDFD
Sbjct: 61 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDNDYADFSSKILHLKGDRKDFD 120
Query: 948 FVKSSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEVDA 769
FVKSSLSAEGFDVVYDINGREADEV PILDALPNLEQFIYCSSAGVYLK+D LPH E DA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAETDA 180
Query: 768 VDPKSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 589
VDPKSRHKGKLETESLL+AR VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP+S
Sbjct: 181 VDPKSRHKGKLETESLLQARGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPSS 240
Query: 588 GIQITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPEIV 409
G+QITQLGHVKDLATAFI+VLGNEKASK+VFNISG+KYVTFDGLA+ACAKAGGFPEPEI+
Sbjct: 241 GLQITQLGHVKDLATAFIQVLGNEKASKEVFNISGEKYVTFDGLARACAKAGGFPEPEII 300
Query: 408 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTFRK 229
HYNPK+FDFGKKK+FPFRDQHFFASIEKAK VLGW+PEF LVEGL DSY LDFGRGT+RK
Sbjct: 301 HYNPKDFDFGKKKSFPFRDQHFFASIEKAKRVLGWEPEFGLVEGLADSYNLDFGRGTYRK 360
Query: 228 EADFSTDDIILGKSLV 181
EADFSTDDIILGKSLV
Sbjct: 361 EADFSTDDIILGKSLV 376
>gb|AAL32648.1| g5bf protein [Arabidopsis thaliana]
Length = 378
Score = 665 bits (1717), Expect = 0.0
Identities = 321/378 (84%), Positives = 354/378 (93%)
Frame = -3
Query: 1308 MASMVVLQQKQPSFSVLPSSLSEFSGVRLTASVQYKKKVWQPKGALHVSASAAKKILIMG 1129
MA M++LQQ QPSFS+L SSLS+F+G +L VQYK+KV QPKGAL+VSAS+ KKILIMG
Sbjct: 1 MAKMMMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMG 60
Query: 1128 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKDFD 949
GTRFIG+FLSR+LVKEGHQVTLFTRGK+PI +QLP ESD D+ADF SKILHLKGDRKD+D
Sbjct: 61 GTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120
Query: 948 FVKSSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEVDA 769
FVKSSLSAEGFDVVYDINGREA+EV PIL+ALP LEQ+IYCSSAGVYLK+D LPH E DA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDA 180
Query: 768 VDPKSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 589
VDPKSRHKGKLETESLL+++ VNWTSIRPVYIYGPLNYNPVE+WFFHRLKAGRPIP+PNS
Sbjct: 181 VDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEKWFFHRLKAGRPIPVPNS 240
Query: 588 GIQITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPEIV 409
GIQI+QLGHVKDLATAF+ VLGNEKAS+++FNISG+KYVTFDGLAKACAKAGGFPEPEIV
Sbjct: 241 GIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEIV 300
Query: 408 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTFRK 229
HYNPKEFDFGKKKAFPFRDQHFFAS+EKAK VLGWKPEFDLVEGLTDSY LDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 228 EADFSTDDIILGKSLVLQ 175
EADF+TDD+IL K LVLQ
Sbjct: 361 EADFTTDDMILSKKLVLQ 378
>ref|XP_004302291.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 380
Score = 665 bits (1716), Expect = 0.0
Identities = 329/381 (86%), Positives = 357/381 (93%), Gaps = 2/381 (0%)
Frame = -3
Query: 1308 MASMVVLQQKQPSFSVLP-SSLSEFSGVRLTAS-VQYKKKVWQPKGALHVSASAAKKILI 1135
MA +V +Q + PS S+LP SSLS+F+G RL S +Q+K++V QP+GAL VSAS+AKKILI
Sbjct: 1 MAKLVSVQ-RHPSVSLLPPSSLSDFNGTRLLHSHLQFKRRVSQPRGALQVSASSAKKILI 59
Query: 1134 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKD 955
MGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPITQQLP ESD+DY DF SKILHLKGDRKD
Sbjct: 60 MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDSDYTDFASKILHLKGDRKD 119
Query: 954 FDFVKSSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEV 775
FDFVKSSLSAEGFDVVYDINGREA+E+ PILD LP LEQ+IYCSSAGVYLK+D LPH+E+
Sbjct: 120 FDFVKSSLSAEGFDVVYDINGREAEEIVPILDGLPKLEQYIYCSSAGVYLKSDQLPHFEI 179
Query: 774 DAVDPKSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 595
DAVDPKSRHKGKLETESLLE+R VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 239
Query: 594 NSGIQITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPE 415
NSGIQITQLGHVKDLATAF+KVL NEKASK+VFNISG+KYVTFDGLAKACAKA GFPEPE
Sbjct: 240 NSGIQITQLGHVKDLATAFVKVLCNEKASKEVFNISGEKYVTFDGLAKACAKAAGFPEPE 299
Query: 414 IVHYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTF 235
IVHYNPKEFDFGKKKAFPFRDQHFFASI+KAKSVLGWKPE+DLVEGL DSY LDFGRGTF
Sbjct: 300 IVHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEYDLVEGLADSYNLDFGRGTF 359
Query: 234 RKEADFSTDDIILGKSLVLQS 172
RKEADFSTDD+ILGKSLVLQS
Sbjct: 360 RKEADFSTDDMILGKSLVLQS 380
>gb|AAM65150.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 378
Score = 665 bits (1715), Expect = 0.0
Identities = 321/378 (84%), Positives = 353/378 (93%)
Frame = -3
Query: 1308 MASMVVLQQKQPSFSVLPSSLSEFSGVRLTASVQYKKKVWQPKGALHVSASAAKKILIMG 1129
MA M++LQQ QPSFS+L SSLS+F+G +L VQYK+KV QPKGAL+VSAS+ KKILIMG
Sbjct: 1 MAKMMMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMG 60
Query: 1128 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKDFD 949
GTRFIG+FLSR+LVKEGHQVTLFTRGK+PI +QLP ESD D+ADF SKILHLKGDRKD+D
Sbjct: 61 GTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120
Query: 948 FVKSSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEVDA 769
FVKSSLSAEGFDVVYDINGREA+EV PIL+ALP LEQ+IYCSSAGVYLK+D LPH E DA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDA 180
Query: 768 VDPKSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 589
VDPKSRHKGKLETESLL+++ VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNS
Sbjct: 181 VDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNS 240
Query: 588 GIQITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPEIV 409
GIQI+QLGHVKDLATAF+ VLGNEKAS+++FNISG+KYVTFDGLA ACAKAGGFPEPEIV
Sbjct: 241 GIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAXACAKAGGFPEPEIV 300
Query: 408 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTFRK 229
HYNPKEFDFGKKKAFPFRDQHFFAS+EKAK VLGWKPEFDLVEGLTDSY LDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 228 EADFSTDDIILGKSLVLQ 175
EADF+TDD+IL K LVLQ
Sbjct: 361 EADFTTDDMILSKKLVLQ 378
>ref|XP_006604786.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like isoform X2 [Glycine max]
Length = 376
Score = 664 bits (1714), Expect = 0.0
Identities = 325/375 (86%), Positives = 348/375 (92%)
Frame = -3
Query: 1308 MASMVVLQQKQPSFSVLPSSLSEFSGVRLTASVQYKKKVWQPKGALHVSASAAKKILIMG 1129
MA +V LQQ Q SFS L SSL +FSG RL +Q+K+K+ PKG+ +VSAS+ KKILIMG
Sbjct: 1 MARVVALQQNQLSFSPLASSLFDFSGTRLQTQLQFKRKLCHPKGSFYVSASSTKKILIMG 60
Query: 1128 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKDFD 949
GTRFIGVFLSRLLVKEGHQVTLFTRGKAP+TQQLP ESD DYADF SKILHLKGDRKDFD
Sbjct: 61 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDNDYADFSSKILHLKGDRKDFD 120
Query: 948 FVKSSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEVDA 769
FVKSSLSAEGFDVVYDINGREADEV PILDALPNLEQFIYCSSAGVYLK+D LPH E DA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAETDA 180
Query: 768 VDPKSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 589
VDPKSRHKGKLETESLL+AR VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP+S
Sbjct: 181 VDPKSRHKGKLETESLLQARGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPSS 240
Query: 588 GIQITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPEIV 409
G+QITQLGHVKDLATAFI+VLGNEKASK+VFNISG+KYVTFDGLA+ACAKAGGFPEPEI+
Sbjct: 241 GLQITQLGHVKDLATAFIQVLGNEKASKEVFNISGEKYVTFDGLARACAKAGGFPEPEII 300
Query: 408 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTFRK 229
HYNPK+FDFGKKK+FPFRDQHFFASIEKAK VLGW+PEF LVEGL DSY LDFGRGT+RK
Sbjct: 301 HYNPKDFDFGKKKSFPFRDQHFFASIEKAKRVLGWEPEFGLVEGLADSYNLDFGRGTYRK 360
Query: 228 EADFSTDDIILGKSL 184
EADFSTDDIILGKSL
Sbjct: 361 EADFSTDDIILGKSL 375
>ref|XP_002281395.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic [Vitis
vinifera] gi|147773479|emb|CAN73432.1| hypothetical
protein VITISV_032681 [Vitis vinifera]
gi|296089806|emb|CBI39625.3| unnamed protein product
[Vitis vinifera]
Length = 378
Score = 664 bits (1713), Expect = 0.0
Identities = 324/377 (85%), Positives = 349/377 (92%)
Frame = -3
Query: 1308 MASMVVLQQKQPSFSVLPSSLSEFSGVRLTASVQYKKKVWQPKGALHVSASAAKKILIMG 1129
MA +VV Q QPSFS+LPSSLS+F+G+RLT +Q ++KV QPKGALHV+AS KKIL+MG
Sbjct: 1 MARLVVQHQNQPSFSLLPSSLSDFNGIRLTNHIQCRRKVCQPKGALHVTASGEKKILMMG 60
Query: 1128 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPDESDADYADFKSKILHLKGDRKDFD 949
GTRFIGVFL+RLLVKEGHQVTLFTRGKA ITQQLP ESD DYA+F SK+LHLKGDRKDF+
Sbjct: 61 GTRFIGVFLARLLVKEGHQVTLFTRGKAAITQQLPGESDKDYAEFSSKVLHLKGDRKDFE 120
Query: 948 FVKSSLSAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKTDYLPHYEVDA 769
FVK+SL+AEGFDVVYDINGREA E+ PILDALPNL+Q+IYCSSAGVY K+D LPH E DA
Sbjct: 121 FVKTSLAAEGFDVVYDINGREAVEIEPILDALPNLQQYIYCSSAGVYKKSDLLPHCETDA 180
Query: 768 VDPKSRHKGKLETESLLEARDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 589
VDPKSRHKGKLETESLL++R VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS
Sbjct: 181 VDPKSRHKGKLETESLLDSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 240
Query: 588 GIQITQLGHVKDLATAFIKVLGNEKASKQVFNISGDKYVTFDGLAKACAKAGGFPEPEIV 409
GIQITQLGHVKDLA AF+ VL NEKASKQVFNISG+KYVTFDGLA+ACAK GFPEPEIV
Sbjct: 241 GIQITQLGHVKDLAKAFLLVLSNEKASKQVFNISGEKYVTFDGLARACAKGAGFPEPEIV 300
Query: 408 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLTDSYKLDFGRGTFRK 229
HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGL DSY LDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRK 360
Query: 228 EADFSTDDIILGKSLVL 178
EADFSTDDIILGKSLVL
Sbjct: 361 EADFSTDDIILGKSLVL 377