BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00000064
         (540 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai...   319   3e-85
ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chai...   318   7e-85
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun...   317   1e-84
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox...   313   1e-83
gb|AFS41724.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   313   2e-83
gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   312   3e-83
gb|AEX60841.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   312   3e-83
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   311   5e-83
gb|AFS41729.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   310   1e-82
sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carbox...   310   1e-82
gb|AFS41725.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   310   1e-82
gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   310   1e-82
gb|AFS41732.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   310   2e-82
gb|AFS41754.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   309   2e-82
gb|AFS41756.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   309   3e-82
dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   308   5e-82
dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   308   7e-82
dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   308   7e-82
gb|AFS41733.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   307   9e-82
gb|AEX60843.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   307   9e-82

>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
           precursor, putative [Ricinus communis]
           gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
           carboxylase small chain, chloroplast precursor, putative
           [Ricinus communis]
          Length = 185

 Score =  319 bits (817), Expect = 3e-85
 Identities = 151/180 (83%), Positives = 169/180 (93%), Gaps = 2/180 (1%)
 Frame = -2

Query: 539 MASSMISTAAVAT-TRSSPAQANMVAPFTGLKSAAAFPVTKKS-ADITSLASNGGRVQCM 366
           MASSM+STA VA+  R+SPAQA+MVAPFTGLKS +AFPVT+K+  DIT+LA+NGGRVQCM
Sbjct: 1   MASSMLSTATVASLNRASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCM 60

Query: 365 QVWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGY 186
           QVWPPLGKKK+ETLSYLPDLT EQLAKE++YLLR GW+PCLEFELEHGFVYRENARSPGY
Sbjct: 61  QVWPPLGKKKFETLSYLPDLTREQLAKEVEYLLRKGWVPCLEFELEHGFVYRENARSPGY 120

Query: 185 YDGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPP 6
           YDGRYWTMWKLPMFGC+D+ QVLKEL+EA K YPN+F+RIIGFDNVRQVQCISFIAYKPP
Sbjct: 121 YDGRYWTMWKLPMFGCSDAVQVLKELDEAIKAYPNSFVRIIGFDNVRQVQCISFIAYKPP 180


>ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chain 1B, chloroplast
           precursor, putative [Ricinus communis]
           gi|223539597|gb|EEF41184.1| Ribulose bisphosphate
           carboxylase small chain 1B, chloroplast precursor,
           putative [Ricinus communis]
          Length = 181

 Score =  318 bits (814), Expect = 7e-85
 Identities = 155/178 (87%), Positives = 167/178 (93%), Gaps = 1/178 (0%)
 Frame = -2

Query: 539 MASSMISTAAVATTRSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCMQ 363
           MASSMIS+A+V+  RSSPAQA MVAPFTGLKSAA+FPVT+K+  DITS+ASNGGRVQCMQ
Sbjct: 1   MASSMISSASVS--RSSPAQATMVAPFTGLKSAASFPVTRKANNDITSIASNGGRVQCMQ 58

Query: 362 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 183
           VWPPLGKKK+ETLSYLPDLT EQLAKE+DYLLR GWIPCLEFELEHGFVYREN RSPGYY
Sbjct: 59  VWPPLGKKKFETLSYLPDLTDEQLAKEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYY 118

Query: 182 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKP 9
           DGRYWTMWKLPMFGC+DS QVLKEL+EAKK YPN+FIRIIGFDN RQVQCISFIAYKP
Sbjct: 119 DGRYWTMWKLPMFGCSDSTQVLKELDEAKKAYPNSFIRIIGFDNRRQVQCISFIAYKP 176


>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus
           domestica x Pyrus communis]
          Length = 179

 Score =  317 bits (812), Expect = 1e-84
 Identities = 151/179 (84%), Positives = 163/179 (91%)
 Frame = -2

Query: 539 MASSMISTAAVATTRSSPAQANMVAPFTGLKSAAAFPVTKKSADITSLASNGGRVQCMQV 360
           MASSMIS+  VAT  S+PAQA MVAPFTGLKS++AFPVT+KS DITS+ASNGGRVQCMQV
Sbjct: 1   MASSMISSGTVATV-SAPAQARMVAPFTGLKSSSAFPVTRKSNDITSIASNGGRVQCMQV 59

Query: 359 WPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYD 180
           WPPLG KK+ETLSYLP L+ E LAKE+DYLLR  W+PCLEFELEHGFVYREN RSPGYYD
Sbjct: 60  WPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENNRSPGYYD 119

Query: 179 GRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 3
           GRYWTMWKLPMFGC DS+QVLKELEEAKK YP +FIRIIGFDNVRQVQCISFIAYKPPG
Sbjct: 120 GRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPPG 178


>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Aralia elata]
          Length = 183

 Score =  313 bits (803), Expect = 1e-83
 Identities = 149/179 (83%), Positives = 166/179 (92%), Gaps = 1/179 (0%)
 Frame = -2

Query: 539 MASSMISTAAVAT-TRSSPAQANMVAPFTGLKSAAAFPVTKKSADITSLASNGGRVQCMQ 363
           MASS+IS+A+VA  +R++PAQA+MVAPFTGLKS AAFPVT+K  DITSL SNGGRVQCM+
Sbjct: 1   MASSVISSASVAAVSRAAPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMK 60

Query: 362 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 183
           VWPPLG KK+ETLSYLP LT E+LAKE+DYLLRSGW+PCLEFELEHG+VYREN RSPGYY
Sbjct: 61  VWPPLGLKKFETLSYLPPLTNEELAKEVDYLLRSGWVPCLEFELEHGWVYRENHRSPGYY 120

Query: 182 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPP 6
           DGRYWTMWKLPMFGC DS+QVL E+EE KKEYPNAFIRIIGFDNVRQVQCISFIA+KPP
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQVLNEVEECKKEYPNAFIRIIGFDNVRQVQCISFIAFKPP 179


>gb|AFS41724.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           (chloroplast) [Gossypium raimondii]
          Length = 182

 Score =  313 bits (801), Expect = 2e-83
 Identities = 155/181 (85%), Positives = 165/181 (91%), Gaps = 2/181 (1%)
 Frame = -2

Query: 539 MASSMISTAAVATT-RSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCM 366
           MASSMIS+A +AT  RSSPAQANMVAPFTGLKSA+AFPVT+K+  DITSLASNGGRVQCM
Sbjct: 1   MASSMISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCM 60

Query: 365 QVWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGY 186
           QVWPPLGKKK+ETLSYLPDLT  QLAKE+DYLLRS WIPCLEFELE GFV+R+ +  P Y
Sbjct: 61  QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSNLPTY 120

Query: 185 YDGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPP 6
           YDGRYWTMWKLPMFGC DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP 
Sbjct: 121 YDGRYWTMWKLPMFGCTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPE 180

Query: 5   G 3
           G
Sbjct: 181 G 181


>gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           (chloroplast) [Gossypium tomentosum]
          Length = 182

 Score =  312 bits (800), Expect = 3e-83
 Identities = 155/181 (85%), Positives = 165/181 (91%), Gaps = 2/181 (1%)
 Frame = -2

Query: 539 MASSMISTAAVATT-RSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCM 366
           MASSMIS+A +AT  RSSPAQANMVAPFTGLKSA+AFPVT+K+  DITSLASNGGRVQCM
Sbjct: 1   MASSMISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCM 60

Query: 365 QVWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGY 186
           QVWPPLGKKK+ETLSYLPDLT  QLAKE+DYLLRS WIPCLEFELE GFV+R+ +  P Y
Sbjct: 61  QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTY 120

Query: 185 YDGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPP 6
           YDGRYWTMWKLPMFGC DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP 
Sbjct: 121 YDGRYWTMWKLPMFGCTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPK 180

Query: 5   G 3
           G
Sbjct: 181 G 181


>gb|AEX60841.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           (chloroplast) [Gossypium hirsutum]
           gi|406366462|gb|AFS41728.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit (chloroplast)
           [Gossypium hirsutum] gi|406366476|gb|AFS41735.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit (chloroplast) [Gossypium barbadense]
           gi|406366492|gb|AFS41743.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit (chloroplast)
           [Gossypium tomentosum] gi|406366506|gb|AFS41750.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit (chloroplast) [Gossypium mustelinum]
           gi|406366520|gb|AFS41757.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit (chloroplast)
           [Gossypium darwinii]
          Length = 182

 Score =  312 bits (800), Expect = 3e-83
 Identities = 155/181 (85%), Positives = 165/181 (91%), Gaps = 2/181 (1%)
 Frame = -2

Query: 539 MASSMISTAAVATT-RSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCM 366
           MASSMIS+A +AT  RSSPAQANMVAPFTGLKSA+AFPVT+K+  DITSLASNGGRVQCM
Sbjct: 1   MASSMISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCM 60

Query: 365 QVWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGY 186
           QVWPPLGKKK+ETLSYLPDLT  QLAKE+DYLLRS WIPCLEFELE GFV+R+ +  P Y
Sbjct: 61  QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTY 120

Query: 185 YDGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPP 6
           YDGRYWTMWKLPMFGC DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP 
Sbjct: 121 YDGRYWTMWKLPMFGCTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPE 180

Query: 5   G 3
           G
Sbjct: 181 G 181


>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Panax ginseng]
          Length = 183

 Score =  311 bits (798), Expect = 5e-83
 Identities = 148/179 (82%), Positives = 164/179 (91%), Gaps = 1/179 (0%)
 Frame = -2

Query: 539 MASSMISTAAVAT-TRSSPAQANMVAPFTGLKSAAAFPVTKKSADITSLASNGGRVQCMQ 363
           MASS+IS+A VA  +R+ PAQA+MVAPFTGLKS AAFPVT+K  DITSL SNGGRVQCM+
Sbjct: 1   MASSVISSATVAAVSRAVPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMK 60

Query: 362 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 183
           VWPPLG KK+ETLSYLP LT EQL+KE+DYLLRSGW+PCLEFELEHGFVYRE+  SPGYY
Sbjct: 61  VWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPGYY 120

Query: 182 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPP 6
           DGRYWTMWKLPMFGC DS+QVLKE+EE KKEYPNA+IRIIGFDNVRQVQCISFIA+KPP
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAFKPP 179


>gb|AFS41729.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           (chloroplast) [Gossypium hirsutum]
           gi|406366478|gb|AFS41736.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit (chloroplast)
           [Gossypium barbadense] gi|406366508|gb|AFS41751.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit (chloroplast) [Gossypium mustelinum]
          Length = 182

 Score =  310 bits (795), Expect = 1e-82
 Identities = 154/181 (85%), Positives = 164/181 (90%), Gaps = 2/181 (1%)
 Frame = -2

Query: 539 MASSMISTAAVATT-RSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCM 366
           MASSMIS+A +AT  RSSPAQANMVAPFTGLKSA+AFPVT+K+  DITSLASNGGRVQCM
Sbjct: 1   MASSMISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCM 60

Query: 365 QVWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGY 186
           QVWPPLGKKK+ETLSYLPDLT  QLAKE+DYLLRS WIPCLEFELE GFV+R+ +  P Y
Sbjct: 61  QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTY 120

Query: 185 YDGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPP 6
           YDGRYWTMWKLPMFGC DSAQVLKELE  KKEYPNAFIRIIGFDNVRQVQCISFIAYKP 
Sbjct: 121 YDGRYWTMWKLPMFGCTDSAQVLKELENCKKEYPNAFIRIIGFDNVRQVQCISFIAYKPK 180

Query: 5   G 3
           G
Sbjct: 181 G 181


>sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|19581|emb|CAA46475.1| ribulose bisphosphate
           carboxylase [Malus sp.]
          Length = 183

 Score =  310 bits (794), Expect = 1e-82
 Identities = 149/182 (81%), Positives = 161/182 (88%), Gaps = 3/182 (1%)
 Frame = -2

Query: 539 MASSMISTAAVATT---RSSPAQANMVAPFTGLKSAAAFPVTKKSADITSLASNGGRVQC 369
           MASSMIS+  VAT    R +PAQA MVAPFTGLKS++A PVT+KS DITS+ASNGGRVQC
Sbjct: 1   MASSMISSGTVATVSADRPAPAQARMVAPFTGLKSSSASPVTRKSNDITSIASNGGRVQC 60

Query: 368 MQVWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPG 189
           MQVWPPLG KK+ETLSYLP L+ E LAKE+DYLLR  W+PCLEFELEHGFVYREN RSPG
Sbjct: 61  MQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPG 120

Query: 188 YYDGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKP 9
           YYDGRYWTMWKLPMFGC DS+QVLKELEEAKK YP +FIRIIGFDNVRQVQCISFIAYKP
Sbjct: 121 YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKP 180

Query: 8   PG 3
            G
Sbjct: 181 AG 182


>gb|AFS41725.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           (chloroplast) [Gossypium raimondii]
          Length = 179

 Score =  310 bits (794), Expect = 1e-82
 Identities = 152/180 (84%), Positives = 164/180 (91%), Gaps = 1/180 (0%)
 Frame = -2

Query: 539 MASSMISTAAVATTRSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCMQ 363
           MASSMIS+A +AT  +SPAQANMVAPFTGLKSA+AFPVT+K+  DITSLASNGGRVQCMQ
Sbjct: 1   MASSMISSATIAT--ASPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQ 58

Query: 362 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 183
           VWPP GKKK+ETLSYLPDLT  QLAKE+DYLLRS W+PCLEFELE GFV+R+ +  P YY
Sbjct: 59  VWPPTGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWVPCLEFELEEGFVHRKYSNLPTYY 118

Query: 182 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 3
           DGRYWTMWKLPMFGC DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG
Sbjct: 119 DGRYWTMWKLPMFGCTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 178


>gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 1A
           [Corchorus olitorius]
          Length = 183

 Score =  310 bits (794), Expect = 1e-82
 Identities = 150/179 (83%), Positives = 164/179 (91%), Gaps = 1/179 (0%)
 Frame = -2

Query: 539 MASSMISTAAVATTRSSPAQANMVAPFTGLKSAAAFPVTKKS-ADITSLASNGGRVQCMQ 363
           MAS+M+S+A V   R+SPAQA +VAPFTGLKSA+AFP T+K+  DITS+ASNGGRVQCMQ
Sbjct: 1   MASAMMSSATVVN-RASPAQATLVAPFTGLKSASAFPTTRKNNRDITSIASNGGRVQCMQ 59

Query: 362 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 183
           VWPPLGKKK+ETLSYLPDLT  QLAKE+DYLLRSGWIPCLEFELEHGFVYRE+  SPGYY
Sbjct: 60  VWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSGWIPCLEFELEHGFVYREHHHSPGYY 119

Query: 182 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPP 6
           DGRYWTMWKLPMFGC DS+QVLKELEEAKK YP+AFIRIIGFDN RQVQCISFIAYKPP
Sbjct: 120 DGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPDAFIRIIGFDNRRQVQCISFIAYKPP 178


>gb|AFS41732.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           (chloroplast) [Gossypium hirsutum]
           gi|406366486|gb|AFS41740.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit (chloroplast)
           [Gossypium barbadense] gi|406366528|gb|AFS41761.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit (chloroplast) [Gossypium darwinii]
          Length = 179

 Score =  310 bits (793), Expect = 2e-82
 Identities = 152/180 (84%), Positives = 164/180 (91%), Gaps = 1/180 (0%)
 Frame = -2

Query: 539 MASSMISTAAVATTRSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCMQ 363
           MASSMIS+A +AT  +SPAQANMVAPFTGLKSA+AFPVT+K+  DITSLASNGGRVQCMQ
Sbjct: 1   MASSMISSATIAT--ASPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQ 58

Query: 362 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 183
           VWPP GKKK+ETLSYLPDLT  QLAKE+DYLLRS W+PCLEFELE GFV+R+ +  P YY
Sbjct: 59  VWPPTGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWVPCLEFELEEGFVHRKYSSLPTYY 118

Query: 182 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 3
           DGRYWTMWKLPMFGC DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG
Sbjct: 119 DGRYWTMWKLPMFGCTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 178


>gb|AFS41754.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           (chloroplast) [Gossypium mustelinum]
          Length = 179

 Score =  309 bits (792), Expect = 2e-82
 Identities = 152/180 (84%), Positives = 164/180 (91%), Gaps = 1/180 (0%)
 Frame = -2

Query: 539 MASSMISTAAVATTRSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCMQ 363
           MASSMIS+A +AT  +SPAQANMVAPFTGLKSA+AFPVT+K+  DITSLASNGGRVQCMQ
Sbjct: 1   MASSMISSATIAT--ASPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQ 58

Query: 362 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 183
           VWPP GKKK+ETLSYLPDLT  QLAKE+DYLLRS W+PCLEFELE GFV+R+ +  P YY
Sbjct: 59  VWPPTGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWVPCLEFELEDGFVHRKYSSLPTYY 118

Query: 182 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 3
           DGRYWTMWKLPMFGC DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG
Sbjct: 119 DGRYWTMWKLPMFGCTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 178


>gb|AFS41756.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           (chloroplast) [Gossypium darwinii]
          Length = 182

 Score =  309 bits (791), Expect = 3e-82
 Identities = 153/181 (84%), Positives = 164/181 (90%), Gaps = 2/181 (1%)
 Frame = -2

Query: 539 MASSMISTAAVATTR-SSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCM 366
           MASSMIS+A +AT   SSPAQANMVAPFTGLKSA+AFPVT+K+  DITSLASNGGRVQCM
Sbjct: 1   MASSMISSATIATVNCSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCM 60

Query: 365 QVWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGY 186
           QVWPPLGKKK+ETLSYLPDLT  QLAKE+DYLLRS WIPCLEFELE GFV+R+ +  P Y
Sbjct: 61  QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTY 120

Query: 185 YDGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPP 6
           YDGRYWTMWKLPMFGC DSAQVL+ELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP 
Sbjct: 121 YDGRYWTMWKLPMFGCTDSAQVLEELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPE 180

Query: 5   G 3
           G
Sbjct: 181 G 181


>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Eucalyptus globulus]
          Length = 181

 Score =  308 bits (789), Expect = 5e-82
 Identities = 146/180 (81%), Positives = 163/180 (90%), Gaps = 1/180 (0%)
 Frame = -2

Query: 539 MASSMISTAAVATT-RSSPAQANMVAPFTGLKSAAAFPVTKKSADITSLASNGGRVQCMQ 363
           MASS++S+AAVA   R+SPAQA+MVAPFTGLKSA+AFPVT+KSADITSLASNGGRVQCMQ
Sbjct: 1   MASSIVSSAAVAAVNRASPAQASMVAPFTGLKSASAFPVTRKSADITSLASNGGRVQCMQ 60

Query: 362 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 183
           VWPP+GKKK+ETLSYLP L+ E+L KEI+YLLR  W+PCLEFELE GFVYR+N +SPGYY
Sbjct: 61  VWPPIGKKKFETLSYLPPLSREELLKEIEYLLRMNWVPCLEFELEKGFVYRDNHKSPGYY 120

Query: 182 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 3
           DGRYWTMWKLPMFGC D  QV KEL+EA K YPNAF+RIIGFDN RQVQCISFIAYKPPG
Sbjct: 121 DGRYWTMWKLPMFGCTDPLQVFKELDEAIKTYPNAFVRIIGFDNKRQVQCISFIAYKPPG 180


>dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Eucalyptus globulus]
          Length = 179

 Score =  308 bits (788), Expect = 7e-82
 Identities = 148/179 (82%), Positives = 164/179 (91%), Gaps = 1/179 (0%)
 Frame = -2

Query: 536 ASSMISTAAVATTRSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCMQV 360
           ++SM+S+ AV   R++PAQA MVAPFTGLKSA+AFPVT+KS+ DITSL+SNGGRVQCMQV
Sbjct: 3   SASMLSSPAV---RATPAQATMVAPFTGLKSASAFPVTRKSSEDITSLSSNGGRVQCMQV 59

Query: 359 WPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYD 180
           WPP+GKKK+ETLSYLP L+ E LAKE+DYLLRSGW+PCLEFELEHGFVYRE+  SPGYYD
Sbjct: 60  WPPIGKKKFETLSYLPPLSPESLAKEVDYLLRSGWVPCLEFELEHGFVYREHHSSPGYYD 119

Query: 179 GRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 3
           GRYWTMWKLPMFGC DSAQVLKELEEAKK YP AFIRIIGFDN RQVQCISFIAYKPPG
Sbjct: 120 GRYWTMWKLPMFGCTDSAQVLKELEEAKKAYPTAFIRIIGFDNKRQVQCISFIAYKPPG 178


>dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Eucalyptus globulus]
          Length = 181

 Score =  308 bits (788), Expect = 7e-82
 Identities = 149/180 (82%), Positives = 160/180 (88%), Gaps = 1/180 (0%)
 Frame = -2

Query: 539 MASSMISTAAVATTRS-SPAQANMVAPFTGLKSAAAFPVTKKSADITSLASNGGRVQCMQ 363
           MASSM+S+AAVA  +S SP QA MVAPFTGLKSA+AFPVT+KS DITSL SNGGRVQCMQ
Sbjct: 1   MASSMLSSAAVAAVKSTSPVQAAMVAPFTGLKSASAFPVTRKSNDITSLPSNGGRVQCMQ 60

Query: 362 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 183
           VWPP+G KK+ETLSYLP LT  QLAKEIDYLLRSGW+PCLEFE E GFVYRE+  SPGYY
Sbjct: 61  VWPPVGLKKFETLSYLPPLTPTQLAKEIDYLLRSGWVPCLEFETEKGFVYREHHHSPGYY 120

Query: 182 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 3
           DGRYWTMWKLPMFGC DSAQVLKELEE KK YP AF+RIIGFDN RQVQCISFIA+KPPG
Sbjct: 121 DGRYWTMWKLPMFGCTDSAQVLKELEECKKAYPTAFVRIIGFDNKRQVQCISFIAFKPPG 180


>gb|AFS41733.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           (chloroplast) [Gossypium hirsutum]
          Length = 179

 Score =  307 bits (787), Expect = 9e-82
 Identities = 151/180 (83%), Positives = 163/180 (90%), Gaps = 1/180 (0%)
 Frame = -2

Query: 539 MASSMISTAAVATTRSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCMQ 363
           MASSMIS+A +AT  +SPAQANMVAPFTGLKSA+AFPVT+K+  DITSLASNGGRVQCMQ
Sbjct: 1   MASSMISSATIAT--ASPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQ 58

Query: 362 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 183
           VWPP GKKK+ETLSYLPDLT  QLAKE+DYLLRS W+PCLEFELE GFV+R+ +  P YY
Sbjct: 59  VWPPTGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWVPCLEFELEEGFVHRKYSSLPTYY 118

Query: 182 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 3
           DGRYWTMWKLPMFGC DSAQVLKELEE KK YPNAFIRIIGFDNVRQVQCISFIAYKPPG
Sbjct: 119 DGRYWTMWKLPMFGCTDSAQVLKELEECKKAYPNAFIRIIGFDNVRQVQCISFIAYKPPG 178


>gb|AEX60843.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           (chloroplast) [Gossypium hirsutum]
           gi|406366484|gb|AFS41739.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit (chloroplast)
           [Gossypium barbadense] gi|406366500|gb|AFS41747.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit (chloroplast) [Gossypium tomentosum]
           gi|406366526|gb|AFS41760.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit (chloroplast)
           [Gossypium darwinii]
          Length = 179

 Score =  307 bits (787), Expect = 9e-82
 Identities = 151/180 (83%), Positives = 163/180 (90%), Gaps = 1/180 (0%)
 Frame = -2

Query: 539 MASSMISTAAVATTRSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCMQ 363
           MASSMIS+A +AT  +SPAQANMVAPFTGLKSA+AFPV +K+  DITSLASNGGRVQCMQ
Sbjct: 1   MASSMISSATIAT--ASPAQANMVAPFTGLKSASAFPVIRKANNDITSLASNGGRVQCMQ 58

Query: 362 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 183
           VWPP GKKK+ETLSYLPDLT  QLAKE+DYLLRS W+PCLEFELE GFV+R+ +  P YY
Sbjct: 59  VWPPTGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWVPCLEFELEEGFVHRKYSSLPTYY 118

Query: 182 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 3
           DGRYWTMWKLPMFGC DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG
Sbjct: 119 DGRYWTMWKLPMFGCTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 178