BLASTX nr result
ID: Catharanthus22_contig00000059
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00000059
(357 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBY05833.1| Ribulose 1,5-bisphosphate carboxylase small subu... 77 2e-12
dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 77 3e-12
emb|CAD11990.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 75 7e-12
gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 74 3e-11
gb|AFS41729.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 74 3e-11
gb|AFS41724.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 74 3e-11
gb|AEX60841.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 74 3e-11
gb|AEX60836.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 74 3e-11
sp|P16032.2|RBS1_MESCR RecName: Full=Ribulose bisphosphate carbo... 72 6e-11
sp|P31333.2|RBS_GOSHI RecName: Full=Ribulose bisphosphate carbox... 72 1e-10
gb|AFS41756.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 72 1e-10
gb|AFS41727.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 72 1e-10
gb|AEX60835.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 72 1e-10
sp|Q43832.1|RBS2_SPIOL RecName: Full=Ribulose bisphosphate carbo... 71 1e-10
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun... 71 2e-10
gb|AAA33035.1| ribulose-1-5-bisphosphate carboxylase [Mesembryan... 71 2e-10
dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 71 2e-10
gb|AFS41754.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 70 3e-10
gb|AFS41733.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 70 3e-10
gb|AFS41732.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 70 3e-10
>emb|CBY05833.1| Ribulose 1,5-bisphosphate carboxylase small subunit precursor
[Coffea canephora] gi|336478343|emb|CBY89197.1| ribulose
1,5-bisphosphate carboxylase small subunit precursor
[Coffea canephora]
Length = 181
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/51 (80%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = +3
Query: 207 MASSMISTAAVATT-RSSPAQANMVAPFTGLKSATAFPITKKSADITSLAS 356
MASSMIS+AAVATT R+SPAQA+MVAPFTGLK+A++FPI+KKS DITSLA+
Sbjct: 1 MASSMISSAAVATTTRASPAQASMVAPFTGLKAASSFPISKKSVDITSLAT 51
>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 76.6 bits (187), Expect = 3e-12
Identities = 40/51 (78%), Positives = 48/51 (94%), Gaps = 1/51 (1%)
Frame = +3
Query: 207 MASSMISTAAVATT-RSSPAQANMVAPFTGLKSATAFPITKKSADITSLAS 356
MASS++S+AAVA R+SPAQA+MVAPFTGLKSA+AFP+T+KSADITSLAS
Sbjct: 1 MASSIVSSAAVAAVNRASPAQASMVAPFTGLKSASAFPVTRKSADITSLAS 51
>emb|CAD11990.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Coffea arabica] gi|24940140|emb|CAD11991.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Coffea arabica]
Length = 181
Score = 75.5 bits (184), Expect = 7e-12
Identities = 40/51 (78%), Positives = 48/51 (94%), Gaps = 1/51 (1%)
Frame = +3
Query: 207 MASSMISTAAVATT-RSSPAQANMVAPFTGLKSATAFPITKKSADITSLAS 356
MASSMIS+AAVATT R+SPAQA+MVAPF GLK+A++FPI+KKS DITSLA+
Sbjct: 1 MASSMISSAAVATTTRASPAQASMVAPFNGLKAASSFPISKKSVDITSLAT 51
>gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium tomentosum]
Length = 182
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/52 (78%), Positives = 47/52 (90%), Gaps = 2/52 (3%)
Frame = +3
Query: 207 MASSMISTAAVATT-RSSPAQANMVAPFTGLKSATAFPITKK-SADITSLAS 356
MASSMIS+A +AT RSSPAQANMVAPFTGLKSA+AFP+T+K + DITSLAS
Sbjct: 1 MASSMISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLAS 52
>gb|AFS41729.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366478|gb|AFS41736.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366508|gb|AFS41751.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium mustelinum]
Length = 182
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/52 (78%), Positives = 47/52 (90%), Gaps = 2/52 (3%)
Frame = +3
Query: 207 MASSMISTAAVATT-RSSPAQANMVAPFTGLKSATAFPITKK-SADITSLAS 356
MASSMIS+A +AT RSSPAQANMVAPFTGLKSA+AFP+T+K + DITSLAS
Sbjct: 1 MASSMISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLAS 52
>gb|AFS41724.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium raimondii]
Length = 182
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/52 (78%), Positives = 47/52 (90%), Gaps = 2/52 (3%)
Frame = +3
Query: 207 MASSMISTAAVATT-RSSPAQANMVAPFTGLKSATAFPITKK-SADITSLAS 356
MASSMIS+A +AT RSSPAQANMVAPFTGLKSA+AFP+T+K + DITSLAS
Sbjct: 1 MASSMISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLAS 52
>gb|AEX60841.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366462|gb|AFS41728.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium hirsutum] gi|406366476|gb|AFS41735.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium barbadense]
gi|406366492|gb|AFS41743.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium tomentosum] gi|406366506|gb|AFS41750.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium mustelinum]
gi|406366520|gb|AFS41757.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium darwinii]
Length = 182
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/52 (78%), Positives = 47/52 (90%), Gaps = 2/52 (3%)
Frame = +3
Query: 207 MASSMISTAAVATT-RSSPAQANMVAPFTGLKSATAFPITKK-SADITSLAS 356
MASSMIS+A +AT RSSPAQANMVAPFTGLKSA+AFP+T+K + DITSLAS
Sbjct: 1 MASSMISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLAS 52
>gb|AEX60836.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit,
partial (chloroplast) [Gossypium raimondii]
Length = 168
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/52 (78%), Positives = 47/52 (90%), Gaps = 2/52 (3%)
Frame = +3
Query: 207 MASSMISTAAVATT-RSSPAQANMVAPFTGLKSATAFPITKK-SADITSLAS 356
MASSMIS+A +AT RSSPAQANMVAPFTGLKSA+AFP+T+K + DITSLAS
Sbjct: 1 MASSMISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLAS 52
>sp|P16032.2|RBS1_MESCR RecName: Full=Ribulose bisphosphate carboxylase small chain 1,
chloroplastic; Short=RuBisCO small subunit 1; Flags:
Precursor gi|304442|gb|AAA03693.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Mesembryanthemum crystallinum]
gi|228311|prf||1802403A RuBisCO:SUBUNIT=small
Length = 182
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/50 (70%), Positives = 43/50 (86%)
Frame = +3
Query: 207 MASSMISTAAVATTRSSPAQANMVAPFTGLKSATAFPITKKSADITSLAS 356
MASSM+S+AAVAT +PAQA+MVAPF GLKS AFP+TKK+ DITS+A+
Sbjct: 1 MASSMVSSAAVATVNRTPAQASMVAPFNGLKSVAAFPVTKKNNDITSVAT 50
>sp|P31333.2|RBS_GOSHI RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|450505|emb|CAA38026.1| ribulose
bisphosphate carboxylase [Gossypium hirsutum]
gi|371942044|gb|AEX60834.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium hirsutum] gi|406366448|gb|AFS41721.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium arboreum]
gi|406366458|gb|AFS41726.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium hirsutum] gi|406366488|gb|AFS41741.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium tomentosum]
gi|406366504|gb|AFS41749.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium mustelinum] gi|406366516|gb|AFS41755.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium darwinii]
Length = 182
Score = 71.6 bits (174), Expect = 1e-10
Identities = 40/52 (76%), Positives = 46/52 (88%), Gaps = 2/52 (3%)
Frame = +3
Query: 207 MASSMISTAAVATTR-SSPAQANMVAPFTGLKSATAFPITKK-SADITSLAS 356
MASSMIS+A +AT SSPAQANMVAPFTGLKSA+AFP+T+K + DITSLAS
Sbjct: 1 MASSMISSATIATVNCSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLAS 52
>gb|AFS41756.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium darwinii]
Length = 182
Score = 71.6 bits (174), Expect = 1e-10
Identities = 40/52 (76%), Positives = 46/52 (88%), Gaps = 2/52 (3%)
Frame = +3
Query: 207 MASSMISTAAVATTR-SSPAQANMVAPFTGLKSATAFPITKK-SADITSLAS 356
MASSMIS+A +AT SSPAQANMVAPFTGLKSA+AFP+T+K + DITSLAS
Sbjct: 1 MASSMISSATIATVNCSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLAS 52
>gb|AFS41727.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366474|gb|AFS41734.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366490|gb|AFS41742.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium tomentosum]
Length = 182
Score = 71.6 bits (174), Expect = 1e-10
Identities = 40/52 (76%), Positives = 46/52 (88%), Gaps = 2/52 (3%)
Frame = +3
Query: 207 MASSMISTAAVATTR-SSPAQANMVAPFTGLKSATAFPITKK-SADITSLAS 356
MASSMIS+A +AT SSPAQANMVAPFTGLKSA+AFP+T+K + DITSLAS
Sbjct: 1 MASSMISSATIATVNCSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLAS 52
>gb|AEX60835.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit,
partial (chloroplast) [Gossypium herbaceum]
Length = 171
Score = 71.6 bits (174), Expect = 1e-10
Identities = 40/52 (76%), Positives = 46/52 (88%), Gaps = 2/52 (3%)
Frame = +3
Query: 207 MASSMISTAAVATTR-SSPAQANMVAPFTGLKSATAFPITKK-SADITSLAS 356
MASSMIS+A +AT SSPAQANMVAPFTGLKSA+AFP+T+K + DITSLAS
Sbjct: 1 MASSMISSATIATVNCSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLAS 52
>sp|Q43832.1|RBS2_SPIOL RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
chloroplastic; Short=RuBisCO small subunit 2; Flags:
Precursor gi|1297052|emb|CAA66201.1|
ribulose-bisphosphate carboxylase [Spinacia oleracea]
Length = 180
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = +3
Query: 207 MASSMISTAAVATTRSSPAQANMVAPFTGLKSATAFPITKKSADITSLAS 356
MASS++S+AAVAT +PAQA+MVAPFTGLKS FP TKK+ DITSLAS
Sbjct: 1 MASSVLSSAAVATVSRTPAQASMVAPFTGLKSTVGFPATKKNDDITSLAS 50
>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus
domestica x Pyrus communis]
Length = 179
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = +3
Query: 207 MASSMISTAAVATTRSSPAQANMVAPFTGLKSATAFPITKKSADITSLAS 356
MASSMIS+ VAT S+PAQA MVAPFTGLKS++AFP+T+KS DITS+AS
Sbjct: 1 MASSMISSGTVATV-SAPAQARMVAPFTGLKSSSAFPVTRKSNDITSIAS 49
>gb|AAA33035.1| ribulose-1-5-bisphosphate carboxylase [Mesembryanthemum
crystallinum]
Length = 182
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/50 (68%), Positives = 42/50 (84%)
Frame = +3
Query: 207 MASSMISTAAVATTRSSPAQANMVAPFTGLKSATAFPITKKSADITSLAS 356
MASSM+S+AAVAT +PAQA+MV PF GLKS AFP+TKK+ DITS+A+
Sbjct: 1 MASSMVSSAAVATVNRTPAQASMVVPFNGLKSVAAFPVTKKNNDITSVAT 50
>dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/51 (74%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Frame = +3
Query: 207 MASSMISTAAVATTRS-SPAQANMVAPFTGLKSATAFPITKKSADITSLAS 356
MASSM+S+AAVA +S SP QA MVAPFTGLKSA+AFP+T+KS DITSL S
Sbjct: 1 MASSMLSSAAVAAVKSTSPVQAAMVAPFTGLKSASAFPVTRKSNDITSLPS 51
>gb|AFS41754.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium mustelinum]
Length = 179
Score = 70.1 bits (170), Expect = 3e-10
Identities = 39/51 (76%), Positives = 46/51 (90%), Gaps = 1/51 (1%)
Frame = +3
Query: 207 MASSMISTAAVATTRSSPAQANMVAPFTGLKSATAFPITKK-SADITSLAS 356
MASSMIS+A +AT +SPAQANMVAPFTGLKSA+AFP+T+K + DITSLAS
Sbjct: 1 MASSMISSATIAT--ASPAQANMVAPFTGLKSASAFPVTRKANNDITSLAS 49
>gb|AFS41733.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
Length = 179
Score = 70.1 bits (170), Expect = 3e-10
Identities = 39/51 (76%), Positives = 46/51 (90%), Gaps = 1/51 (1%)
Frame = +3
Query: 207 MASSMISTAAVATTRSSPAQANMVAPFTGLKSATAFPITKK-SADITSLAS 356
MASSMIS+A +AT +SPAQANMVAPFTGLKSA+AFP+T+K + DITSLAS
Sbjct: 1 MASSMISSATIAT--ASPAQANMVAPFTGLKSASAFPVTRKANNDITSLAS 49
>gb|AFS41732.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366486|gb|AFS41740.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366528|gb|AFS41761.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium darwinii]
Length = 179
Score = 70.1 bits (170), Expect = 3e-10
Identities = 39/51 (76%), Positives = 46/51 (90%), Gaps = 1/51 (1%)
Frame = +3
Query: 207 MASSMISTAAVATTRSSPAQANMVAPFTGLKSATAFPITKK-SADITSLAS 356
MASSMIS+A +AT +SPAQANMVAPFTGLKSA+AFP+T+K + DITSLAS
Sbjct: 1 MASSMISSATIAT--ASPAQANMVAPFTGLKSASAFPVTRKANNDITSLAS 49