BLASTX nr result
ID: Catharanthus22_contig00000050
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00000050
(691 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002315948.2| hypothetical protein POPTR_0010s13740g [Popu... 132 1e-28
ref|XP_002311451.2| hypothetical protein POPTR_0008s11750g [Popu... 130 3e-28
ref|XP_002529130.1| Plastid-specific 30S ribosomal protein 3, ch... 127 4e-27
gb|EXB97159.1| 30S ribosomal protein 3 [Morus notabilis] 126 7e-27
gb|ESW11139.1| hypothetical protein PHAVU_008G005100g [Phaseolus... 125 1e-26
gb|EOY02101.1| Ribosomal protein PSRP-3/Ycf65 [Theobroma cacao] 123 5e-26
gb|EMJ17195.1| hypothetical protein PRUPE_ppa011873mg [Prunus pe... 123 6e-26
ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloropl... 123 6e-26
ref|XP_003620792.1| 30S ribosomal protein [Medicago truncatula] ... 123 6e-26
emb|CBI33662.3| unnamed protein product [Vitis vinifera] 123 6e-26
ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloropl... 122 8e-26
ref|XP_004513065.1| PREDICTED: 30S ribosomal protein 3, chloropl... 122 1e-25
ref|XP_004234566.1| PREDICTED: 30S ribosomal protein 3, chloropl... 122 1e-25
ref|XP_006826814.1| hypothetical protein AMTR_s00010p00055110 [A... 121 2e-25
ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycin... 121 2e-25
ref|XP_006362559.1| PREDICTED: 30S ribosomal protein 3, chloropl... 120 3e-25
ref|XP_006358052.1| PREDICTED: 30S ribosomal protein 3, chloropl... 120 3e-25
ref|XP_004238943.1| PREDICTED: 30S ribosomal protein 3-1, chloro... 120 3e-25
gb|AFK41643.1| unknown [Lotus japonicus] 120 3e-25
ref|XP_006437700.1| hypothetical protein CICLE_v10032902mg [Citr... 120 4e-25
>ref|XP_002315948.2| hypothetical protein POPTR_0010s13740g [Populus trichocarpa]
gi|550329750|gb|EEF02119.2| hypothetical protein
POPTR_0010s13740g [Populus trichocarpa]
Length = 189
Score = 132 bits (331), Expect = 1e-28
Identities = 60/84 (71%), Positives = 70/84 (83%)
Frame = -1
Query: 253 PAPTSKESEPSQPTAVVEKVGRKVEKPKLILKFIWMEKNIGLGLDQKIGGHGTVPLSPYY 74
P+ ++ES P+Q T E + ++VEKP+L+LKFIWMEKNIGL LDQ I GHGTVPLSPY+
Sbjct: 80 PSTETEESIPTQETEKAEVLVKQVEKPRLVLKFIWMEKNIGLALDQVIPGHGTVPLSPYF 139
Query: 73 FWPRKDAWEELKTVLESKPWISQK 2
FWPRKDAWEELK LESKPWISQK
Sbjct: 140 FWPRKDAWEELKATLESKPWISQK 163
>ref|XP_002311451.2| hypothetical protein POPTR_0008s11750g [Populus trichocarpa]
gi|550332879|gb|EEE88818.2| hypothetical protein
POPTR_0008s11750g [Populus trichocarpa]
Length = 189
Score = 130 bits (328), Expect = 3e-28
Identities = 60/84 (71%), Positives = 68/84 (80%)
Frame = -1
Query: 253 PAPTSKESEPSQPTAVVEKVGRKVEKPKLILKFIWMEKNIGLGLDQKIGGHGTVPLSPYY 74
P+ + ES P Q T E V ++VEKP+L+LKF+WMEKNIGL LDQ I GHGTVPLSPY+
Sbjct: 80 PSNAAGESIPIQETEKAELVVKRVEKPRLVLKFVWMEKNIGLALDQVIPGHGTVPLSPYF 139
Query: 73 FWPRKDAWEELKTVLESKPWISQK 2
FWPRKDAWEELK LESKPWISQK
Sbjct: 140 FWPRKDAWEELKATLESKPWISQK 163
>ref|XP_002529130.1| Plastid-specific 30S ribosomal protein 3, chloroplast precursor,
putative [Ricinus communis] gi|223531409|gb|EEF33243.1|
Plastid-specific 30S ribosomal protein 3, chloroplast
precursor, putative [Ricinus communis]
Length = 180
Score = 127 bits (318), Expect = 4e-27
Identities = 60/84 (71%), Positives = 70/84 (83%), Gaps = 5/84 (5%)
Frame = -1
Query: 238 KESEPSQPTA--VVEKVG---RKVEKPKLILKFIWMEKNIGLGLDQKIGGHGTVPLSPYY 74
K SE +P + ++EKV ++VEKP+L+LKFIWMEKNIGL LDQ I GHGT+PLSPY+
Sbjct: 72 KTSETEEPISDDIIEKVEVAVKQVEKPRLVLKFIWMEKNIGLALDQVIPGHGTIPLSPYF 131
Query: 73 FWPRKDAWEELKTVLESKPWISQK 2
FWPRKDAWEELKT LESKPWISQK
Sbjct: 132 FWPRKDAWEELKTTLESKPWISQK 155
>gb|EXB97159.1| 30S ribosomal protein 3 [Morus notabilis]
Length = 181
Score = 126 bits (316), Expect = 7e-27
Identities = 72/154 (46%), Positives = 88/154 (57%)
Frame = -1
Query: 463 PSFIPSKNHHPCFLPFRTSVISINPTRASTYKHSSSTINLNLKHQTLNITARKFXXXXXX 284
PS PSK H P +TS+ + T ++ S S T ++RKF
Sbjct: 15 PSTWPSKTHFHIPKPIQTSLFAKPRTFSNMNSRSFSEFKPT---PTATHSSRKFALSASA 71
Query: 283 XXXXXXXXSDPAPTSKESEPSQPTAVVEKVGRKVEKPKLILKFIWMEKNIGLGLDQKIGG 104
T+ + + T + V + V KP+LILKFIWMEKNIG+GLDQ I G
Sbjct: 72 VAAED--------TTVDDSTVEDTEKLGVVVKPVAKPRLILKFIWMEKNIGIGLDQVIPG 123
Query: 103 HGTVPLSPYYFWPRKDAWEELKTVLESKPWISQK 2
HGT+PLSPYYFWPRKDAWEELK +LESKPWISQK
Sbjct: 124 HGTIPLSPYYFWPRKDAWEELKVLLESKPWISQK 157
>gb|ESW11139.1| hypothetical protein PHAVU_008G005100g [Phaseolus vulgaris]
Length = 164
Score = 125 bits (315), Expect = 1e-26
Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 3/86 (3%)
Frame = -1
Query: 250 APTSKESEPSQPTAVVEKVG---RKVEKPKLILKFIWMEKNIGLGLDQKIGGHGTVPLSP 80
A T+ E + PT EK+G + EKP+++LKFIWMEKNIG+ LDQ I GHGT+PLSP
Sbjct: 55 AETAVVQEEAPPTPQPEKLGVVVKATEKPRIVLKFIWMEKNIGIALDQTIPGHGTIPLSP 114
Query: 79 YYFWPRKDAWEELKTVLESKPWISQK 2
YYFWPRKDAWEELK +LESKPWISQK
Sbjct: 115 YYFWPRKDAWEELKELLESKPWISQK 140
>gb|EOY02101.1| Ribosomal protein PSRP-3/Ycf65 [Theobroma cacao]
Length = 181
Score = 123 bits (309), Expect = 5e-26
Identities = 64/86 (74%), Positives = 71/86 (82%), Gaps = 3/86 (3%)
Frame = -1
Query: 250 APTSKESE-PSQPTAV-VEKVG-RKVEKPKLILKFIWMEKNIGLGLDQKIGGHGTVPLSP 80
A TS E+E PS T+ EKV ++VEK +L+LKFIWMEKNIGLGLDQ I GHGTVPLSP
Sbjct: 72 AETSTETEIPSVTTSPETEKVVVKQVEKSRLVLKFIWMEKNIGLGLDQVIPGHGTVPLSP 131
Query: 79 YYFWPRKDAWEELKTVLESKPWISQK 2
Y+FWPRKDAWEELK LESKPWISQK
Sbjct: 132 YFFWPRKDAWEELKATLESKPWISQK 157
>gb|EMJ17195.1| hypothetical protein PRUPE_ppa011873mg [Prunus persica]
Length = 192
Score = 123 bits (308), Expect = 6e-26
Identities = 66/152 (43%), Positives = 87/152 (57%), Gaps = 1/152 (0%)
Frame = -1
Query: 454 IPSKNHHPCFLPFRTSVISINPTRAS-TYKHSSSTINLNLKHQTLNITARKFXXXXXXXX 278
+P + H + ++ P ++ + HS S + L L T N+ K
Sbjct: 23 LPQQKHKLLLVNNNQRALNFKPRTSNFSVSHSLSELKLRLTQTTRNV---KLSAAAESLV 79
Query: 277 XXXXXXSDPAPTSKESEPSQPTAVVEKVGRKVEKPKLILKFIWMEKNIGLGLDQKIGGHG 98
+D T++ + VV K +EKP+L+LKFIWMEKNIG+ LDQ I GHG
Sbjct: 80 AEETAAADDNLTTETPLEKEKLGVVVK---PIEKPRLVLKFIWMEKNIGIALDQMIPGHG 136
Query: 97 TVPLSPYYFWPRKDAWEELKTVLESKPWISQK 2
++PLSPYYFWPRKDAWEELK +LESKPWISQK
Sbjct: 137 SIPLSPYYFWPRKDAWEELKVLLESKPWISQK 168
>ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform 1
[Vitis vinifera] gi|359488272|ref|XP_003633730.1|
PREDICTED: 30S ribosomal protein 3, chloroplastic-like
isoform 2 [Vitis vinifera]
Length = 176
Score = 123 bits (308), Expect = 6e-26
Identities = 76/177 (42%), Positives = 101/177 (57%), Gaps = 3/177 (1%)
Frame = -1
Query: 523 MSSMAAIPSGSVKPGGTLTYPSFIPSKNHHPCFLPFRTSVISINPTRASTYKHSSSTINL 344
M SMA P+ P L +F S N + + ++ +S+ TR S++ NL
Sbjct: 2 MLSMAVQPN----PNAALKSYTFPMSSNRNHRLMFKSSNALSLYSTR-------SASTNL 50
Query: 343 NLKHQTLNITARKFXXXXXXXXXXXXXXSDPAPTSKESEPSQPTAVVEKVG---RKVEKP 173
L+ + A S+ + +ES + P V EK+G + +EKP
Sbjct: 51 RLRASPAPVVA--------------VAVSEQSSAPQESLSASPLDV-EKLGVVVKPMEKP 95
Query: 172 KLILKFIWMEKNIGLGLDQKIGGHGTVPLSPYYFWPRKDAWEELKTVLESKPWISQK 2
+L+LKFIWMEKNIG+ LDQ I GHGT+PLSPYYFWPRKDAWEE+K +LESKPWISQK
Sbjct: 96 RLVLKFIWMEKNIGVALDQAIPGHGTIPLSPYYFWPRKDAWEEIKVLLESKPWISQK 152
>ref|XP_003620792.1| 30S ribosomal protein [Medicago truncatula]
gi|217075300|gb|ACJ86010.1| unknown [Medicago
truncatula] gi|355495807|gb|AES77010.1| 30S ribosomal
protein [Medicago truncatula]
gi|388491518|gb|AFK33825.1| unknown [Medicago
truncatula]
Length = 161
Score = 123 bits (308), Expect = 6e-26
Identities = 60/86 (69%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Frame = -1
Query: 256 DPAPTSKESEP-SQPTAVVEKVGRKVEKPKLILKFIWMEKNIGLGLDQKIGGHGTVPLSP 80
D A S + P SQ VV K +KP+L+LKFIWMEKNIG+GLDQ I GHGT+PLSP
Sbjct: 54 DAAAVSLQPPPQSQKLGVVVK---PTDKPRLVLKFIWMEKNIGIGLDQMIPGHGTIPLSP 110
Query: 79 YYFWPRKDAWEELKTVLESKPWISQK 2
YYFWPRKDAWEELK +LESKPWISQK
Sbjct: 111 YYFWPRKDAWEELKELLESKPWISQK 136
>emb|CBI33662.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 123 bits (308), Expect = 6e-26
Identities = 76/177 (42%), Positives = 101/177 (57%), Gaps = 3/177 (1%)
Frame = -1
Query: 523 MSSMAAIPSGSVKPGGTLTYPSFIPSKNHHPCFLPFRTSVISINPTRASTYKHSSSTINL 344
M SMA P+ P L +F S N + + ++ +S+ TR S++ NL
Sbjct: 1 MLSMAVQPN----PNAALKSYTFPMSSNRNHRLMFKSSNALSLYSTR-------SASTNL 49
Query: 343 NLKHQTLNITARKFXXXXXXXXXXXXXXSDPAPTSKESEPSQPTAVVEKVG---RKVEKP 173
L+ + A S+ + +ES + P V EK+G + +EKP
Sbjct: 50 RLRASPAPVVA--------------VAVSEQSSAPQESLSASPLDV-EKLGVVVKPMEKP 94
Query: 172 KLILKFIWMEKNIGLGLDQKIGGHGTVPLSPYYFWPRKDAWEELKTVLESKPWISQK 2
+L+LKFIWMEKNIG+ LDQ I GHGT+PLSPYYFWPRKDAWEE+K +LESKPWISQK
Sbjct: 95 RLVLKFIWMEKNIGVALDQAIPGHGTIPLSPYYFWPRKDAWEEIKVLLESKPWISQK 151
>ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cucumis
sativus] gi|449484535|ref|XP_004156909.1| PREDICTED: 30S
ribosomal protein 3, chloroplastic-like [Cucumis
sativus]
Length = 192
Score = 122 bits (307), Expect = 8e-26
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 3/81 (3%)
Frame = -1
Query: 235 ESEPSQPTAVVEKVG---RKVEKPKLILKFIWMEKNIGLGLDQKIGGHGTVPLSPYYFWP 65
+ S + V EK+G + +EKP+L+LKFIWMEKNIG+ LDQ I GHGT+PLSPYYFWP
Sbjct: 88 DDSDSVSSPVKEKLGVVVKPMEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWP 147
Query: 64 RKDAWEELKTVLESKPWISQK 2
RKDAWEELK +LESKPWISQK
Sbjct: 148 RKDAWEELKVLLESKPWISQK 168
>ref|XP_004513065.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cicer
arietinum]
Length = 164
Score = 122 bits (306), Expect = 1e-25
Identities = 54/80 (67%), Positives = 65/80 (81%)
Frame = -1
Query: 241 SKESEPSQPTAVVEKVGRKVEKPKLILKFIWMEKNIGLGLDQKIGGHGTVPLSPYYFWPR 62
S +S PS + + V + +KP+L+LKF+WMEKNIG+ LDQ + GHGTVPLSPYYFWPR
Sbjct: 61 SLQSSPSLQSQKLGVVVKPTDKPRLVLKFVWMEKNIGIALDQMVPGHGTVPLSPYYFWPR 120
Query: 61 KDAWEELKTVLESKPWISQK 2
KDAWEELK +LESKPWISQK
Sbjct: 121 KDAWEELKELLESKPWISQK 140
>ref|XP_004234566.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Solanum
lycopersicum]
Length = 176
Score = 122 bits (306), Expect = 1e-25
Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 3/84 (3%)
Frame = -1
Query: 244 TSKESEPSQPTAVVEKVG---RKVEKPKLILKFIWMEKNIGLGLDQKIGGHGTVPLSPYY 74
TS S + EK+G + +EKP+L+LKFIWMEKNIG+ LDQ I GHGT+PLSPYY
Sbjct: 69 TSTRDSISSDSLQKEKLGVLVKPLEKPRLVLKFIWMEKNIGISLDQVIPGHGTIPLSPYY 128
Query: 73 FWPRKDAWEELKTVLESKPWISQK 2
FWPRKDAWEELK +LESKPWISQK
Sbjct: 129 FWPRKDAWEELKVMLESKPWISQK 152
>ref|XP_006826814.1| hypothetical protein AMTR_s00010p00055110 [Amborella trichopoda]
gi|548831243|gb|ERM94051.1| hypothetical protein
AMTR_s00010p00055110 [Amborella trichopoda]
Length = 189
Score = 121 bits (304), Expect = 2e-25
Identities = 56/78 (71%), Positives = 65/78 (83%)
Frame = -1
Query: 235 ESEPSQPTAVVEKVGRKVEKPKLILKFIWMEKNIGLGLDQKIGGHGTVPLSPYYFWPRKD 56
E EP + TA + V + KP+L+LKFIW+EKNIGLGLDQ I GHGT+PLSPYYFWPRKD
Sbjct: 90 EIEPEE-TATAKVVVKTPTKPRLVLKFIWLEKNIGLGLDQVIPGHGTIPLSPYYFWPRKD 148
Query: 55 AWEELKTVLESKPWISQK 2
AWEEL++ LESKPWISQK
Sbjct: 149 AWEELRSKLESKPWISQK 166
>ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycine max]
gi|255628049|gb|ACU14369.1| unknown [Glycine max]
Length = 158
Score = 121 bits (304), Expect = 2e-25
Identities = 54/75 (72%), Positives = 63/75 (84%), Gaps = 3/75 (4%)
Frame = -1
Query: 217 PTAVVEKVG---RKVEKPKLILKFIWMEKNIGLGLDQKIGGHGTVPLSPYYFWPRKDAWE 47
PT EK+G + EKP+L+LKFIWMEKNIG+ LDQ + GHGT+PLSPYYFWPRKDAWE
Sbjct: 60 PTPQPEKLGVVVKPTEKPRLVLKFIWMEKNIGIALDQMVPGHGTIPLSPYYFWPRKDAWE 119
Query: 46 ELKTVLESKPWISQK 2
ELK +LE+KPWISQK
Sbjct: 120 ELKELLENKPWISQK 134
>ref|XP_006362559.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Solanum
tuberosum]
Length = 167
Score = 120 bits (302), Expect = 3e-25
Identities = 55/71 (77%), Positives = 62/71 (87%), Gaps = 3/71 (4%)
Frame = -1
Query: 205 VEKVGRK---VEKPKLILKFIWMEKNIGLGLDQKIGGHGTVPLSPYYFWPRKDAWEELKT 35
+EKV K +EKP+L+LKFIWMEKNIGLGLDQ + HG+VPLSPY+FWPRKDAWEELKT
Sbjct: 73 IEKVDMKKKVIEKPRLVLKFIWMEKNIGLGLDQVLPDHGSVPLSPYFFWPRKDAWEELKT 132
Query: 34 VLESKPWISQK 2
LESKPWISQK
Sbjct: 133 TLESKPWISQK 143
>ref|XP_006358052.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Solanum
tuberosum]
Length = 176
Score = 120 bits (302), Expect = 3e-25
Identities = 56/84 (66%), Positives = 66/84 (78%), Gaps = 3/84 (3%)
Frame = -1
Query: 244 TSKESEPSQPTAVVEKVG---RKVEKPKLILKFIWMEKNIGLGLDQKIGGHGTVPLSPYY 74
TS S + EK+G + +EKP+L+LKFIWMEKNIG+ LDQ I GHGT+PLSPYY
Sbjct: 69 TSTHDSISSDSHQKEKLGVVVKPLEKPRLVLKFIWMEKNIGISLDQVIPGHGTIPLSPYY 128
Query: 73 FWPRKDAWEELKTVLESKPWISQK 2
FWPRKDAWEELK +LESKPWIS+K
Sbjct: 129 FWPRKDAWEELKVMLESKPWISEK 152
>ref|XP_004238943.1| PREDICTED: 30S ribosomal protein 3-1, chloroplastic-like [Solanum
lycopersicum]
Length = 167
Score = 120 bits (302), Expect = 3e-25
Identities = 55/71 (77%), Positives = 62/71 (87%), Gaps = 3/71 (4%)
Frame = -1
Query: 205 VEKVGRK---VEKPKLILKFIWMEKNIGLGLDQKIGGHGTVPLSPYYFWPRKDAWEELKT 35
+EKV K +EKP+L+LKFIWMEKNIGLGLDQ + HG+VPLSPY+FWPRKDAWEELKT
Sbjct: 73 IEKVDMKKKVIEKPRLVLKFIWMEKNIGLGLDQVLPDHGSVPLSPYFFWPRKDAWEELKT 132
Query: 34 VLESKPWISQK 2
LESKPWISQK
Sbjct: 133 TLESKPWISQK 143
>gb|AFK41643.1| unknown [Lotus japonicus]
Length = 175
Score = 120 bits (302), Expect = 3e-25
Identities = 69/146 (47%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
Frame = -1
Query: 436 HPCFLPFRTSVISINPTRA-STYKHSSSTINLNLKHQTLNITARKFXXXXXXXXXXXXXX 260
HP P S I N + + S++ HS S + +L N + +
Sbjct: 12 HPTLKPLTLSPIKFNTSSSFSSHSHSHSHSHSHLCPS--NPSRFRLAVSAAETPSAAVAV 69
Query: 259 SDPAPTSKESEPSQPTAVVEKVGRKVEKPKLILKFIWMEKNIGLGLDQKIGGHGTVPLSP 80
++ TS S P Q VV K +KP+L+LKFIWMEKNIG+ LDQ + GHGT+PLSP
Sbjct: 70 AEQDDTSL-SPPPQKLGVVVK---PTDKPRLVLKFIWMEKNIGIALDQAVPGHGTIPLSP 125
Query: 79 YYFWPRKDAWEELKTVLESKPWISQK 2
YYFWPRKDAWEELK +LESKPWISQK
Sbjct: 126 YYFWPRKDAWEELKELLESKPWISQK 151
>ref|XP_006437700.1| hypothetical protein CICLE_v10032902mg [Citrus clementina]
gi|568861902|ref|XP_006484438.1| PREDICTED: 30S
ribosomal protein 3-1, chloroplastic-like isoform X2
[Citrus sinensis] gi|557539896|gb|ESR50940.1|
hypothetical protein CICLE_v10032902mg [Citrus
clementina]
Length = 173
Score = 120 bits (301), Expect = 4e-25
Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
Frame = -1
Query: 244 TSKESEPSQPTAVVEKVG-RKVEKPKLILKFIWMEKNIGLGLDQKIGGHGTVPLSPYYFW 68
TS E+ P+ P V +++EKP+L+LKFIWMEKNIGL LDQ I G+GT+PLS Y+FW
Sbjct: 67 TSTETIPATPVETKAGVSVKQLEKPRLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFW 126
Query: 67 PRKDAWEELKTVLESKPWISQK 2
PRKDAWEELKT LESKPWISQK
Sbjct: 127 PRKDAWEELKTTLESKPWISQK 148