BLASTX nr result

ID: Bupleurum21_contig00039466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039466
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317561.1| predicted protein [Populus trichocarpa] gi|2...    47   1e-09
emb|CBI38489.3| unnamed protein product [Vitis vinifera]               46   6e-08
ref|XP_002265270.2| PREDICTED: uncharacterized protein At4g38062...    46   2e-07
ref|XP_002319798.1| predicted protein [Populus trichocarpa] gi|2...    42   2e-07

>ref|XP_002317561.1| predicted protein [Populus trichocarpa] gi|222860626|gb|EEE98173.1|
           predicted protein [Populus trichocarpa]
          Length = 1187

 Score = 47.4 bits (111), Expect(2) = 1e-09
 Identities = 28/66 (42%), Positives = 31/66 (46%)
 Frame = -2

Query: 207 ANDKLRTSHAXXXXXXXXXXXXXXXXXXXENAKNIDSEKKIRRLEEAIEGLKGVVSVSQK 28
           ANDKLR                        N KNID E+KI      IEGLKG++S SQK
Sbjct: 88  ANDKLRVDCGEKYKKWEEEKRAIVLALDEANEKNIDQEQKINVFMAEIEGLKGLLSASQK 147

Query: 27  KCAGAE 10
           KC  AE
Sbjct: 148 KCLEAE 153



 Score = 40.0 bits (92), Expect(2) = 1e-09
 Identities = 16/33 (48%), Positives = 27/33 (81%)
 Frame = -1

Query: 310 ESYEKDHEVSEMKQVLEDLKCSLNEKQGILLRV 212
           ES  K+ E+S++K++ EDL+CSLNEK+ ++ R+
Sbjct: 53  ESNGKEEEISKVKRMCEDLQCSLNEKESVIRRL 85


>emb|CBI38489.3| unnamed protein product [Vitis vinifera]
          Length = 791

 Score = 45.8 bits (107), Expect(2) = 6e-08
 Identities = 27/66 (40%), Positives = 33/66 (50%)
 Frame = -2

Query: 207 ANDKLRTSHAXXXXXXXXXXXXXXXXXXXENAKNIDSEKKIRRLEEAIEGLKGVVSVSQK 28
           ANDKLR                        N KN+D E+KI   +E IEGLK ++SVS+K
Sbjct: 91  ANDKLRVDCDEKFRKWEEENRKQVLALDEANEKNMDQEQKIHFFKEEIEGLKRLLSVSKK 150

Query: 27  KCAGAE 10
           KC  AE
Sbjct: 151 KCLEAE 156



 Score = 35.8 bits (81), Expect(2) = 6e-08
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -1

Query: 310 ESYEKDHEVSEMKQVLEDLKCSLNEKQGILLRVR 209
           E  EK  E S  KQ+ E+LKC LNEK+ I+  ++
Sbjct: 56  ELNEKSEEASTAKQMYEELKCCLNEKESIIKHLK 89


>ref|XP_002265270.2| PREDICTED: uncharacterized protein At4g38062-like, partial [Vitis
           vinifera]
          Length = 988

 Score = 45.8 bits (107), Expect(2) = 2e-07
 Identities = 27/66 (40%), Positives = 33/66 (50%)
 Frame = -2

Query: 207 ANDKLRTSHAXXXXXXXXXXXXXXXXXXXENAKNIDSEKKIRRLEEAIEGLKGVVSVSQK 28
           ANDKLR                        N KN+D E+KI   +E IEGLK ++SVS+K
Sbjct: 34  ANDKLRVDCDEKFWKWEEENRKQVLALDEANEKNMDQEQKIHFFKEEIEGLKRLLSVSKK 93

Query: 27  KCAGAE 10
           KC  AE
Sbjct: 94  KCLEAE 99



 Score = 34.3 bits (77), Expect(2) = 2e-07
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -1

Query: 301 EKDHEVSEMKQVLEDLKCSLNEKQGILLRVR 209
           EK  E S  KQ  E+LKC LNEK+ I+  ++
Sbjct: 2   EKSEEASTAKQKYEELKCCLNEKESIIKHLK 32


>ref|XP_002319798.1| predicted protein [Populus trichocarpa] gi|222858174|gb|EEE95721.1|
           predicted protein [Populus trichocarpa]
          Length = 1024

 Score = 42.0 bits (97), Expect(2) = 2e-07
 Identities = 25/66 (37%), Positives = 29/66 (43%)
 Frame = -2

Query: 207 ANDKLRTSHAXXXXXXXXXXXXXXXXXXXENAKNIDSEKKIRRLEEAIEGLKGVVSVSQK 28
           ANDKL+                        N KNID E+KI      IE  KG++S SQK
Sbjct: 91  ANDKLKVDCGEKYKKWEEEKRGLVLALDESNEKNIDQEQKIHVFMAEIERYKGLLSASQK 150

Query: 27  KCAGAE 10
           KC  AE
Sbjct: 151 KCLAAE 156



 Score = 37.7 bits (86), Expect(2) = 2e-07
 Identities = 15/29 (51%), Positives = 24/29 (82%)
 Frame = -1

Query: 298 KDHEVSEMKQVLEDLKCSLNEKQGILLRV 212
           K+ E+S +K++ EDL+CSLNEK+ I+ R+
Sbjct: 60  KEEEISTVKRMCEDLQCSLNEKESIIRRL 88


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