BLASTX nr result

ID: Bupleurum21_contig00039392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039392
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318360.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
emb|CBI22570.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_002266751.1| PREDICTED: uncharacterized protein LOC100243...    69   4e-10
emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]    69   4e-10
ref|XP_002513608.1| hypothetical protein RCOM_1581370 [Ricinus c...    68   9e-10

>ref|XP_002318360.1| predicted protein [Populus trichocarpa] gi|222859033|gb|EEE96580.1|
           predicted protein [Populus trichocarpa]
          Length = 997

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 50/131 (38%), Positives = 67/131 (51%), Gaps = 23/131 (17%)
 Frame = +1

Query: 4   RNVSPNWHIFLSFLYREGFWASVSILKENGESFKGLLKPFTVHLALLSIINEAI--SMVP 177
           RN +P W I LSFLYREG+WA VS+ K +G    G+LKPFTV  AL  I  +     +V 
Sbjct: 405 RNSTPTWQILLSFLYREGYWALVSLSKGDGNLVTGILKPFTVSSALFFIAGDQFHPPVVA 464

Query: 178 SK-PGIICN----------FERSGHL---------KSGASTSEICATLVDGKRKKIK-KN 294
            K  G+             F++  +L         +SG S  + C  L   KRKK +  N
Sbjct: 465 GKFDGVSMGQVVKKTENEAFKQKINLSHTNGLIGSQSGHSPFDKCGELGGCKRKKKRSSN 524

Query: 295 SLQDLTWNTFC 327
           +L++LTW  FC
Sbjct: 525 TLKELTWRAFC 535


>emb|CBI22570.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 45/113 (39%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
 Frame = +1

Query: 4   RNVSPNWHIFLSFLYREGFWASVSILKENGESFKGLLKPFTVHLALLSIINEAI---SMV 174
           R   P W I LSFL++EG+WA VS+   NG+S  G+LKPFTVH  LLS I+      +MV
Sbjct: 390 RKCEPFWQILLSFLFKEGYWALVSLSNGNGDSCMGILKPFTVHSGLLSTIDNEFYPQNMV 449

Query: 175 PSKPGIICNFERSGHLKSGASTSEICATLVDGKRKKIKKNS--LQDLTWNTFC 327
               G      + GH                GK+K  KK+S   Q L W++FC
Sbjct: 450 DGFCG-----PKVGH----------------GKQKMNKKHSHLHQPLAWSSFC 481


>ref|XP_002266751.1| PREDICTED: uncharacterized protein LOC100243267 [Vitis vinifera]
          Length = 1018

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 24/132 (18%)
 Frame = +1

Query: 4   RNVSPNWHIFLSFLYREGFWASVSILKENGESFKGLLKPFTVHLALLSIINEAI------ 165
           R   P W I LSFL++EG+WA VS+   NG+S  G+LKPFTVH  LLS I+         
Sbjct: 422 RKCEPFWQILLSFLFKEGYWALVSLSNGNGDSCMGILKPFTVHSGLLSTIDNEFYPQNMV 481

Query: 166 ---------SMVPSKPGIICNFERSGHL-------KSGASTSEICATLVDGKRKKIKKNS 297
                      V  +   +C      +        +SG  +S+       GK+K  KK+S
Sbjct: 482 DGFCGPKVGQFVTQRSREVCKHSDDMNASNGIIDSQSGHFSSQESGAPGSGKQKMNKKHS 541

Query: 298 --LQDLTWNTFC 327
              Q L W++FC
Sbjct: 542 HLHQPLAWSSFC 553


>emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 24/132 (18%)
 Frame = +1

Query: 4   RNVSPNWHIFLSFLYREGFWASVSILKENGESFKGLLKPFTVHLALLSIINEAI------ 165
           R   P W I LSFL++EG+WA VS+   NG+S  G+LKPFTVH  LLS I+         
Sbjct: 388 RKCEPFWQILLSFLFKEGYWALVSLSNGNGDSCMGILKPFTVHSGLLSTIDNEFYPQNMV 447

Query: 166 ---------SMVPSKPGIICNFERSGHL-------KSGASTSEICATLVDGKRKKIKKNS 297
                      V  +   +C      +        +SG  +S+       GK+K  KK+S
Sbjct: 448 DGFCGPKVGQFVTQRSREVCKHSDDMNASNGIIDSQSGHFSSQESGAPGSGKQKMNKKHS 507

Query: 298 --LQDLTWNTFC 327
              Q L W++FC
Sbjct: 508 HLHQPLAWSSFC 519


>ref|XP_002513608.1| hypothetical protein RCOM_1581370 [Ricinus communis]
           gi|223547516|gb|EEF49011.1| hypothetical protein
           RCOM_1581370 [Ricinus communis]
          Length = 981

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 48/127 (37%), Positives = 60/127 (47%), Gaps = 20/127 (15%)
 Frame = +1

Query: 4   RNVSPNWHIFLSFLYREGFWASVSILKENGESFKGLLKPFTVHLALLSII---------- 153
           R   P   I  SFLYR+ +WA VS+   NG S +G++KPFTV LALLSI+          
Sbjct: 392 RKSIPILQILFSFLYRQDYWALVSLSNSNGNSLEGIMKPFTVSLALLSIVKFNPNNEFDG 451

Query: 154 --------NEAISMVPSKPGIICNFERSGHLKSGASTSEICATLVDGKRKKIKK--NSLQ 303
                           SK  I  +F   G  +   S S     + D KRKK KK  N LQ
Sbjct: 452 AGFHQSVMKSETKNCESKSDISHSFGLVGS-QFTPSPSNKDVEIEDSKRKKTKKSLNMLQ 510

Query: 304 DLTWNTF 324
           +LTW+ F
Sbjct: 511 ELTWSAF 517


Top