BLASTX nr result

ID: Bupleurum21_contig00039382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039382
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI98629.1| hypothetical protein 111O18.16 [Coffea canephora]       69   5e-10
gb|AAG01117.1|AF273333_2 BAC19.2 [Solanum lycopersicum]                68   9e-10
ref|XP_002310219.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
emb|CBI17537.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002270563.1| PREDICTED: putative F-box protein At3g23950 ...    67   2e-09

>gb|AEI98629.1| hypothetical protein 111O18.16 [Coffea canephora]
          Length = 360

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 42/121 (34%), Positives = 67/121 (55%)
 Frame = +1

Query: 1   QLIRIHSNPNSTLGIMDGKLCAAYTTR*TVKVSTLSNVHSNTMQMGSNVIMWEHKYAFQL 180
           QLI+ +     TLG ++GKLC+       + +  L+NVHSNTMQM S+V MWE K+   +
Sbjct: 239 QLIQGYYGAKGTLGNVNGKLCSVSWCGRELYLHALANVHSNTMQMTSHVKMWEQKHV--V 296

Query: 181 HHSSFSVTAPDRRSVAYIGDGLVLVQKDQMMFSYDIKKKETKLLSSNCDYNVTTVPYVNS 360
             S F         V + G  ++++Q    ++ +++K +ETK LS     +   +PYVNS
Sbjct: 297 LESRFLGGDVADAKVIFAGGDMLVIQCRSSIYLHNLKTQETKALSILIKNHSRCLPYVNS 356

Query: 361 L 363
           +
Sbjct: 357 I 357


>gb|AAG01117.1|AF273333_2 BAC19.2 [Solanum lycopersicum]
          Length = 358

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/112 (34%), Positives = 54/112 (48%)
 Frame = +1

Query: 37  LGIMDGKLCAAYTTR*TVKVSTLSNVHSNTMQMGSNVIMWEHKYAFQLHHSSFSVTAPDR 216
           LG   GKLC    +   + ++ L+N HSNTMQ+GS + MW  K    L        A   
Sbjct: 247 LGTFSGKLCKVDVSGDIISLNVLANTHSNTMQIGSQIKMWSEKEIVVLDSEIVGDGAARN 306

Query: 217 RSVAYIGDGLVLVQKDQMMFSYDIKKKETKLLSSNCDYNVTTVPYVNSLTLL 372
            +V ++   +++V   +   SYD K + TK LSS         PYVNSL  L
Sbjct: 307 HTVLHVDSDIMVVLCGRRTCSYDFKSRLTKFLSSKVGILDRCFPYVNSLVSL 358


>ref|XP_002310219.1| predicted protein [Populus trichocarpa] gi|222853122|gb|EEE90669.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 2/119 (1%)
 Frame = +1

Query: 13  IHSNPNSTLGIMDGKLCAAYTTR*TVKVSTLSNVHSNTMQMGSNVIMWEHKYAFQLHH-- 186
           I++N  S+LG ++GKL  A      + V+ LSN ++NTMQM S+   W+ K+A  L+   
Sbjct: 239 IYNNGCSSLGAVNGKLHTACVQGSKLSVNELSNAYANTMQMNSSTKTWQAKHAVTLNFPV 298

Query: 187 SSFSVTAPDRRSVAYIGDGLVLVQKDQMMFSYDIKKKETKLLSSNCDYNVTTVPYVNSL 363
                 + D+ +V ++G  +V+++ ++ + SY++K KE   + +  D     VPYVNSL
Sbjct: 299 PDLYPRSYDKETVLFLGGDMVVMRFEKKLISYNMKTKEFTEVFTEEDTYSRMVPYVNSL 357


>emb|CBI17537.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/109 (36%), Positives = 55/109 (50%)
 Frame = +1

Query: 37  LGIMDGKLCAAYTTR*TVKVSTLSNVHSNTMQMGSNVIMWEHKYAFQLHHSSFSVTAPDR 216
           L +M GKLC+      TV V+ LSNV+SNTM+M S    W  K    L  S+    +  +
Sbjct: 303 LCVMQGKLCSVSMHGWTVTVNVLSNVYSNTMEMHSKARTWVQKRLINLDPSALGAGSCKQ 362

Query: 217 RSVAYIGDGLVLVQKDQMMFSYDIKKKETKLLSSNCDYNVTTVPYVNSL 363
            SV +     V++     +FSYD+K KET  L S        + YVN+L
Sbjct: 363 PSVVFADSDTVVIHDGTTIFSYDMKSKETSALGS--AVGTRLIAYVNNL 409


>ref|XP_002270563.1| PREDICTED: putative F-box protein At3g23950 [Vitis vinifera]
          Length = 357

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/109 (36%), Positives = 55/109 (50%)
 Frame = +1

Query: 37  LGIMDGKLCAAYTTR*TVKVSTLSNVHSNTMQMGSNVIMWEHKYAFQLHHSSFSVTAPDR 216
           L +M GKLC+      TV V+ LSNV+SNTM+M S    W  K    L  S+    +  +
Sbjct: 248 LCVMQGKLCSVSMHGWTVTVNVLSNVYSNTMEMHSKARTWVQKRLINLDPSALGAGSCKQ 307

Query: 217 RSVAYIGDGLVLVQKDQMMFSYDIKKKETKLLSSNCDYNVTTVPYVNSL 363
            SV +     V++     +FSYD+K KET  L S        + YVN+L
Sbjct: 308 PSVVFADSDTVVIHDGTTIFSYDMKSKETSALGS--AVGTRLIAYVNNL 354


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