BLASTX nr result

ID: Bupleurum21_contig00039361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039361
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317696.1| predicted protein [Populus trichocarpa] gi|2...    58   6e-08
ref|XP_002322110.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06
ref|XP_002311066.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002317696.1| predicted protein [Populus trichocarpa] gi|222858369|gb|EEE95916.1|
           predicted protein [Populus trichocarpa]
          Length = 1018

 Score = 58.2 bits (139), Expect(2) = 6e-08
 Identities = 30/62 (48%), Positives = 39/62 (62%)
 Frame = -3

Query: 374 QLFRLEYFSLCNNSFQGGLPANLSSWVDIVYIGMFGYYLEGRLPTDFSFWSKLDTLDLGK 195
           QLFRL+Y SL NNSFQ  LP NLS   ++ ++GM G  L G++P++    S L    L K
Sbjct: 122 QLFRLQYLSLSNNSFQDELPGNLSHCSNLRFLGMEGNNLTGKIPSELGSLSNLRAPGLLK 181

Query: 194 NH 189
           NH
Sbjct: 182 NH 183



 Score = 23.5 bits (49), Expect(2) = 6e-08
 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
 Frame = -1

Query: 139 FLYLDDNNLVGGIPXXXXXXXXXXXXXXAGNNLSGTLE-----TLHNMSSL 2
           +L L  NNL G +P                NNLSG L      TL N+ +L
Sbjct: 224 YLDLSFNNLSGMVPEELYNISSLSTVAMVSNNLSGRLPLDLGLTLPNLQTL 274


>ref|XP_002322110.1| predicted protein [Populus trichocarpa] gi|222869106|gb|EEF06237.1|
           predicted protein [Populus trichocarpa]
          Length = 1023

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/62 (40%), Positives = 38/62 (61%)
 Frame = -3

Query: 374 QLFRLEYFSLCNNSFQGGLPANLSSWVDIVYIGMFGYYLEGRLPTDFSFWSKLDTLDLGK 195
           QLFRL Y SL NNSFQG LP+ L    +++++ ++G    G++P+     S+L  L L  
Sbjct: 125 QLFRLRYLSLANNSFQGELPSTLGICSNLIFLNLYGNNFRGKIPSALGSLSRLRRLSLAS 184

Query: 194 NH 189
           N+
Sbjct: 185 NN 186


>ref|XP_002311066.1| predicted protein [Populus trichocarpa] gi|222850886|gb|EEE88433.1|
           predicted protein [Populus trichocarpa]
          Length = 1023

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/62 (40%), Positives = 39/62 (62%)
 Frame = -3

Query: 374 QLFRLEYFSLCNNSFQGGLPANLSSWVDIVYIGMFGYYLEGRLPTDFSFWSKLDTLDLGK 195
           +LFR++  SL NN+F G +P N+S   +++ IG+    L G+LP +F   SKL  L+  +
Sbjct: 120 RLFRIQELSLGNNTFSGEIPVNISRCTNLLSIGLASNNLTGKLPAEFGSLSKLQVLNFQR 179

Query: 194 NH 189
           NH
Sbjct: 180 NH 181


Top