BLASTX nr result

ID: Bupleurum21_contig00039317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039317
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD96928.1| hypothetical protein [Cleome spinosa]                  186   2e-45
ref|XP_002871676.1| mitochondrial substrate carrier family prote...   182   3e-44
ref|XP_002530999.1| Mitochondrial carnitine/acylcarnitine carrie...   182   3e-44
ref|NP_568317.1| Mitochondrial substrate carrier family protein ...   182   3e-44
gb|AAM63042.1| putative mitochondrial carrier protein [Arabidops...   182   3e-44

>gb|ABD96928.1| hypothetical protein [Cleome spinosa]
          Length = 321

 Score =  186 bits (471), Expect = 2e-45
 Identities = 87/107 (81%), Positives = 99/107 (92%)
 Frame = -3

Query: 322 KVSEPTQAAIANGVAGMTASVFSQAVVVPIDVVSQKLMVQGYSGHASYNGGLDVARKVLR 143
           K SEPTQAAIANG+AGMTAS+FSQAV VPIDVVSQKLMVQG+SGHA+Y GGLDV RKV++
Sbjct: 116 KFSEPTQAAIANGIAGMTASLFSQAVFVPIDVVSQKLMVQGFSGHATYTGGLDVVRKVMK 175

Query: 142 SDGIRGLYRGFGLSVLTYSPSSAVWWATYGASQRAIWRFLGHDSESD 2
           SDG+RGLYRGFGLSV+TYSPSSA WWA+YG+SQR IWRFLG+  ES+
Sbjct: 176 SDGVRGLYRGFGLSVMTYSPSSAAWWASYGSSQRLIWRFLGYGGESE 222


>ref|XP_002871676.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317513|gb|EFH47935.1| mitochondrial
           substrate carrier family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 323

 Score =  182 bits (461), Expect = 3e-44
 Identities = 84/107 (78%), Positives = 99/107 (92%)
 Frame = -3

Query: 322 KVSEPTQAAIANGVAGMTASVFSQAVVVPIDVVSQKLMVQGYSGHASYNGGLDVARKVLR 143
           ++SEPTQAAIANG+AGMTAS+FSQAV VPIDVVSQKLMVQGYSGHA+Y GG+DVA K+++
Sbjct: 117 ELSEPTQAAIANGIAGMTASLFSQAVFVPIDVVSQKLMVQGYSGHATYTGGIDVATKIIK 176

Query: 142 SDGIRGLYRGFGLSVLTYSPSSAVWWATYGASQRAIWRFLGHDSESD 2
           S G+RGLYRGFGLSV+TYSPSSA WWA+YG+SQR IWRFLG+  +SD
Sbjct: 177 SYGVRGLYRGFGLSVMTYSPSSAAWWASYGSSQRVIWRFLGYGGDSD 223


>ref|XP_002530999.1| Mitochondrial carnitine/acylcarnitine carrier protein, putative
           [Ricinus communis] gi|223529426|gb|EEF31387.1|
           Mitochondrial carnitine/acylcarnitine carrier protein,
           putative [Ricinus communis]
          Length = 339

 Score =  182 bits (461), Expect = 3e-44
 Identities = 82/105 (78%), Positives = 98/105 (93%)
 Frame = -3

Query: 322 KVSEPTQAAIANGVAGMTASVFSQAVVVPIDVVSQKLMVQGYSGHASYNGGLDVARKVLR 143
           K+S+P+QAA ANG+AGMTAS+FSQAV VP+DVVSQKLMVQGYSGHA YNGGLDVARK+++
Sbjct: 116 KLSDPSQAAFANGIAGMTASLFSQAVFVPVDVVSQKLMVQGYSGHAKYNGGLDVARKIMK 175

Query: 142 SDGIRGLYRGFGLSVLTYSPSSAVWWATYGASQRAIWRFLGHDSE 8
           +DGIRG YRGFGLSV+TYSPSSAVWWA+YG+SQR IW+ LGH ++
Sbjct: 176 TDGIRGFYRGFGLSVMTYSPSSAVWWASYGSSQRVIWKLLGHGTD 220


>ref|NP_568317.1| Mitochondrial substrate carrier family protein [Arabidopsis
           thaliana] gi|15292889|gb|AAK92815.1| putative
           mitochondrial carrier protein [Arabidopsis thaliana]
           gi|18252183|gb|AAL61924.1| putative mitochondrial
           carrier protein [Arabidopsis thaliana]
           gi|20258917|gb|AAM14152.1| putative mitochondrial
           carrier protein [Arabidopsis thaliana]
           gi|21386943|gb|AAM47875.1| putative mitochondrial
           carrier protein [Arabidopsis thaliana]
           gi|332004804|gb|AED92187.1| Mitochondrial substrate
           carrier family protein [Arabidopsis thaliana]
          Length = 323

 Score =  182 bits (461), Expect = 3e-44
 Identities = 84/107 (78%), Positives = 99/107 (92%)
 Frame = -3

Query: 322 KVSEPTQAAIANGVAGMTASVFSQAVVVPIDVVSQKLMVQGYSGHASYNGGLDVARKVLR 143
           ++SEPTQAAIANG+AGMTAS+FSQAV VPIDVVSQKLMVQGYSGHA+Y GG+DVA K+++
Sbjct: 117 ELSEPTQAAIANGIAGMTASLFSQAVFVPIDVVSQKLMVQGYSGHATYTGGIDVATKIIK 176

Query: 142 SDGIRGLYRGFGLSVLTYSPSSAVWWATYGASQRAIWRFLGHDSESD 2
           S G+RGLYRGFGLSV+TYSPSSA WWA+YG+SQR IWRFLG+  +SD
Sbjct: 177 SYGVRGLYRGFGLSVMTYSPSSAAWWASYGSSQRVIWRFLGYGGDSD 223


>gb|AAM63042.1| putative mitochondrial carrier protein [Arabidopsis thaliana]
          Length = 323

 Score =  182 bits (461), Expect = 3e-44
 Identities = 84/107 (78%), Positives = 99/107 (92%)
 Frame = -3

Query: 322 KVSEPTQAAIANGVAGMTASVFSQAVVVPIDVVSQKLMVQGYSGHASYNGGLDVARKVLR 143
           ++SEPTQAAIANG+AGMTAS+FSQAV VPIDVVSQKLMVQGYSGHA+Y GG+DVA K+++
Sbjct: 117 ELSEPTQAAIANGIAGMTASLFSQAVFVPIDVVSQKLMVQGYSGHATYTGGIDVATKIIK 176

Query: 142 SDGIRGLYRGFGLSVLTYSPSSAVWWATYGASQRAIWRFLGHDSESD 2
           S G+RGLYRGFGLSV+TYSPSSA WWA+YG+SQR IWRFLG+  +SD
Sbjct: 177 SYGVRGLYRGFGLSVMTYSPSSAAWWASYGSSQRVIWRFLGYGGDSD 223


Top