BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039297
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]            106   2e-21
gb|AFB73911.1| polyprotein [Citrus sinensis]                           95   7e-18
gb|ACB45081.1| putative polyprotein [Solanum habrochaites]             93   2e-17
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                              93   3e-17
gb|AFB73912.1| polyprotein [Citrus sinensis]                           93   3e-17

>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
          Length = 1428

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 10/166 (6%)
 Frame = -3

Query: 468  ETKQTTNIAQPTWIECDDQTEMREENNTQVTESETSA--AEIQS-LQKSTRQHKVPTWHS 298
            ET      +Q    E   + +M   + T+     T A  + + S +++S+R  K P W  
Sbjct: 824  ETSMVHEDSQGNETESYSENQMSRPSTTEEVSENTHAIPSHVDSYVRRSSRNIKEPMWMK 883

Query: 297  DYNMSANY-------AQKIGEVDVTPQFSCFMAEVSKVHDPKHFNEAIQQSQWLGAMNEE 139
            DY ++  +       A  +    + P+   F++++S+  +PK+F +A Q  +W+ AM +E
Sbjct: 884  DYTITKGHSSTKHPMASYLNYEKLKPECRSFLSKLSEYTEPKNFKQASQDERWIQAMKQE 943

Query: 138  LSALENNNTWEITDLPPGKHVIGSKWLYTTKYDPQRKITRYKARLV 1
            + ALE NNTW++ +LP G H +GSKW+Y  KY    +I R+KARLV
Sbjct: 944  IKALEENNTWQVVELPEGMHAVGSKWIYKVKYKANGEIERFKARLV 989


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
 Frame = -3

Query: 438  PTWIECDDQTEMREENNTQVTESETSAAEIQSLQKSTRQHKVPTWHSDYNMSANYAQKIG 259
            P ++E + +     E   +  E E   +E   +++STR+ + PTWHS+Y    N A    
Sbjct: 727  PVYVENNPENSDSSEAAPEHEEQEPVESEAPEVRRSTRERRPPTWHSEYVTEINVAY--- 783

Query: 258  EVDVTPQFSCFMAEVSKVHDPKHFNEAIQQSQ---WLGAMNEELSALENNNTWEITDLPP 88
                     C + E     +P  F+EA+  S    W+ AM EE+ AL  N TWE+  LP 
Sbjct: 784  ---------CLLTEDG---EPSTFHEALNSSDVALWMTAMQEEIEALHKNKTWELVPLPR 831

Query: 87   GKHVIGSKWLYTTKYDPQRKITRYKARLV 1
            G+  IG+KW+Y  K D   ++ RY+ARLV
Sbjct: 832  GRKAIGNKWVYKIKRDGNDQVERYRARLV 860


>gb|ACB45081.1| putative polyprotein [Solanum habrochaites]
          Length = 559

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/123 (35%), Positives = 68/123 (55%), Gaps = 10/123 (8%)
 Frame = -3

Query: 339 QKSTRQHKVPTWHSDY----------NMSANYAQKIGEVDVTPQFSCFMAEVSKVHDPKH 190
           ++STR  + P W  D+          N   +    I   +++P + C +A +S   +PK 
Sbjct: 276 RQSTRTSRPPIWQKDFVTTFKSRSRSNCLYSLENNIDYKNLSPYYQCCIANLSVDTEPKF 335

Query: 189 FNEAIQQSQWLGAMNEELSALENNNTWEITDLPPGKHVIGSKWLYTTKYDPQRKITRYKA 10
           +++A +  +W+ AM EE+ ALE N TWE+  LP GK  IG KW+Y  KY    ++ R+KA
Sbjct: 336 YHQAAKDKRWIAAMKEEIQALEENKTWEVVTLPIGKKAIGCKWVYKIKYKANGEVERFKA 395

Query: 9   RLV 1
           RLV
Sbjct: 396 RLV 398


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 57/162 (35%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
 Frame = -3

Query: 426  ECDDQTEMREENNTQVT-----ESETSAAE------------IQSLQKSTRQHKVPTWHS 298
            E DD TE  +   TQ+      E ++S AE              + ++S R+ + PTWHS
Sbjct: 703  EVDDSTEKEKPETTQIQVEEEFEQDSSEAEPAHEEPEPESSGAPTTRQSDREKRRPTWHS 762

Query: 297  DYNMSANYAQKIGEVDVTPQFSCFMAEVSKVHDPKHFNEAIQQS---QWLGAMNEELSAL 127
            DY M  N A             C + E     +P  F EAI  S   QW  AM EE+ AL
Sbjct: 763  DYVMEGNVAY------------CLLTEDG---EPSTFQEAINSSDVSQWTAAMQEEIEAL 807

Query: 126  ENNNTWEITDLPPGKHVIGSKWLYTTKYDPQRKITRYKARLV 1
              NNTW++  LP G+  IG+KW++  K +   ++ RY+ARLV
Sbjct: 808  HKNNTWDLVPLPQGRKPIGNKWVFKIKRNGDDQVERYRARLV 849


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
 Frame = -3

Query: 438  PTWIECDDQTEMREENNTQVTESETSAAEIQSLQKSTRQHKVPTWHSDYNMSANYAQKIG 259
            P ++E + +     E   +  E E   +E   +++STR+ + PTWHS+Y    N A    
Sbjct: 727  PVYVENNPENSDSSEAAPEHEEQEPVESEAPEVRRSTRERRPPTWHSEYVTEINVAY--- 783

Query: 258  EVDVTPQFSCFMAEVSKVHDPKHFNEAIQQ---SQWLGAMNEELSALENNNTWEITDLPP 88
                     C + E     +P  F+EA+     + W+ AM EE+ AL  N TWE+  LP 
Sbjct: 784  ---------CLLTEDG---EPSTFHEALNSLDVALWMTAMQEEIEALHKNKTWELVPLPH 831

Query: 87   GKHVIGSKWLYTTKYDPQRKITRYKARLV 1
            G+  IG+KW+Y  K D   ++ RY+ARLV
Sbjct: 832  GRKAIGNKWVYKIKRDGNDQVERYRARLV 860