BLASTX nr result

ID: Bupleurum21_contig00039255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039255
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633845.1| PREDICTED: transmembrane emp24 domain-contai...   119   1e-37
ref|XP_002283884.1| PREDICTED: transmembrane emp24 domain-contai...   119   1e-37
ref|XP_002267401.1| PREDICTED: transmembrane emp24 domain-contai...   111   2e-36
emb|CAN83809.1| hypothetical protein VITISV_026964 [Vitis vinifera]   112   4e-36
ref|XP_002530004.1| Transmembrane protein Tmp21 precursor, putat...   108   3e-35

>ref|XP_003633845.1| PREDICTED: transmembrane emp24 domain-containing protein bai
           isoform 2 [Vitis vinifera]
          Length = 217

 Score =  119 bits (298), Expect(2) = 1e-37
 Identities = 55/75 (73%), Positives = 65/75 (86%), Gaps = 1/75 (1%)
 Frame = +3

Query: 162 DHY-SGTFAFTAAESGDYMACYLVPEHKPPVTHSIEFDWKSDVAGKDWSKVAKKGQVEVM 338
           DH  SG FAFTAAE GDY AC+  P+HKPP+T +I+FDW++ VA KDWSKVAKKGQVEVM
Sbjct: 80  DHIESGNFAFTAAEEGDYTACFWAPQHKPPLTVTIDFDWRTGVAAKDWSKVAKKGQVEVM 139

Query: 339 EVKLKKLFDTVTSIH 383
           E++LKKL+DTVTSIH
Sbjct: 140 ELELKKLYDTVTSIH 154



 Score = 63.2 bits (152), Expect(2) = 1e-37
 Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
 Frame = +1

Query: 1   VILMISWSTFVQAMRFHLKSGSTKCITEDIKSSAMTVGKYNVI--SDSSPTPDSHKITIP 174
           ++++    T   +MRF L SG TKCI+EDIK++AM+VGKY+VI  ++  P PD+HKIT  
Sbjct: 8   IVIVGLMCTAADSMRFDLTSGGTKCISEDIKTNAMSVGKYSVINPNEGFPLPDTHKITAQ 67

Query: 175 V 177
           V
Sbjct: 68  V 68


>ref|XP_002283884.1| PREDICTED: transmembrane emp24 domain-containing protein bai
           isoform 1 [Vitis vinifera]
          Length = 210

 Score =  119 bits (298), Expect(2) = 1e-37
 Identities = 55/75 (73%), Positives = 65/75 (86%), Gaps = 1/75 (1%)
 Frame = +3

Query: 162 DHY-SGTFAFTAAESGDYMACYLVPEHKPPVTHSIEFDWKSDVAGKDWSKVAKKGQVEVM 338
           DH  SG FAFTAAE GDY AC+  P+HKPP+T +I+FDW++ VA KDWSKVAKKGQVEVM
Sbjct: 80  DHIESGNFAFTAAEEGDYTACFWAPQHKPPLTVTIDFDWRTGVAAKDWSKVAKKGQVEVM 139

Query: 339 EVKLKKLFDTVTSIH 383
           E++LKKL+DTVTSIH
Sbjct: 140 ELELKKLYDTVTSIH 154



 Score = 63.2 bits (152), Expect(2) = 1e-37
 Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
 Frame = +1

Query: 1   VILMISWSTFVQAMRFHLKSGSTKCITEDIKSSAMTVGKYNVI--SDSSPTPDSHKITIP 174
           ++++    T   +MRF L SG TKCI+EDIK++AM+VGKY+VI  ++  P PD+HKIT  
Sbjct: 8   IVIVGLMCTAADSMRFDLTSGGTKCISEDIKTNAMSVGKYSVINPNEGFPLPDTHKITAQ 67

Query: 175 V 177
           V
Sbjct: 68  V 68


>ref|XP_002267401.1| PREDICTED: transmembrane emp24 domain-containing protein bai-like
           [Vitis vinifera]
          Length = 218

 Score =  111 bits (277), Expect(2) = 2e-36
 Identities = 51/71 (71%), Positives = 61/71 (85%)
 Frame = +3

Query: 171 SGTFAFTAAESGDYMACYLVPEHKPPVTHSIEFDWKSDVAGKDWSKVAKKGQVEVMEVKL 350
           SG FAF AAE+GDYMAC+ V  HKPP+T +I+ DWK+ VA KDWS VAKKGQV+VME++L
Sbjct: 92  SGQFAFPAAEAGDYMACFWVVYHKPPLTLTIDLDWKTGVAAKDWSNVAKKGQVDVMELEL 151

Query: 351 KKLFDTVTSIH 383
           KKL+DTVTSIH
Sbjct: 152 KKLYDTVTSIH 162



 Score = 67.0 bits (162), Expect(2) = 2e-36
 Identities = 31/51 (60%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
 Frame = +1

Query: 31  VQAMRFHLKSGSTKCITEDIKSSAMTVGKYNVI--SDSSPTPDSHKITIPV 177
           VQ++RF L+SG TKCI EDIK+ +MTVGKY+V+  +D  P PDSHK+T+ V
Sbjct: 26  VQSIRFELESGHTKCIAEDIKADSMTVGKYSVVNPNDGYPIPDSHKVTVRV 76


>emb|CAN83809.1| hypothetical protein VITISV_026964 [Vitis vinifera]
          Length = 202

 Score =  112 bits (280), Expect(2) = 4e-36
 Identities = 51/71 (71%), Positives = 62/71 (87%)
 Frame = +3

Query: 171 SGTFAFTAAESGDYMACYLVPEHKPPVTHSIEFDWKSDVAGKDWSKVAKKGQVEVMEVKL 350
           SG FAF AAE+GDYMAC+ V +HKPP+T +I+ DWK+ VA KDWS VAKKGQV+VME++L
Sbjct: 82  SGQFAFPAAEAGDYMACFWVLDHKPPLTLTIDLDWKTGVAAKDWSNVAKKGQVDVMELEL 141

Query: 351 KKLFDTVTSIH 383
           KKL+DTVTSIH
Sbjct: 142 KKLYDTVTSIH 152



 Score = 64.7 bits (156), Expect(2) = 4e-36
 Identities = 30/51 (58%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
 Frame = +1

Query: 31  VQAMRFHLKSGSTKCITEDIKSSAMTVGKYNVI--SDSSPTPDSHKITIPV 177
           VQ++RF L+S  TKCI EDIK+ +MTVGKY+V+  +D  P PDSHK+T+ V
Sbjct: 16  VQSIRFELQSAHTKCIAEDIKADSMTVGKYSVVNPNDGYPIPDSHKVTVRV 66


>ref|XP_002530004.1| Transmembrane protein Tmp21 precursor, putative [Ricinus communis]
           gi|223530483|gb|EEF32366.1| Transmembrane protein Tmp21
           precursor, putative [Ricinus communis]
          Length = 190

 Score =  108 bits (271), Expect(2) = 3e-35
 Identities = 50/75 (66%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
 Frame = +3

Query: 162 DHY-SGTFAFTAAESGDYMACYLVPEHKPPVTHSIEFDWKSDVAGKDWSKVAKKGQVEVM 338
           DH  SG FAFTAAE+GDY  C+   EH+P VT +I+F+W++ VA KDWSKVAKKGQ+E+M
Sbjct: 60  DHVESGNFAFTAAEAGDYTTCFWAIEHRPEVTLTIDFEWRTGVAAKDWSKVAKKGQIEIM 119

Query: 339 EVKLKKLFDTVTSIH 383
           E++LKKL DTVTSIH
Sbjct: 120 ELELKKLLDTVTSIH 134



 Score = 65.5 bits (158), Expect(2) = 3e-35
 Identities = 29/46 (63%), Positives = 39/46 (84%), Gaps = 2/46 (4%)
 Frame = +1

Query: 40  MRFHLKSGSTKCITEDIKSSAMTVGKYNVI--SDSSPTPDSHKITI 171
           MRF L SG TKCI+EDIKS++MTVGKY+++  +D SP PD+HK+T+
Sbjct: 1   MRFDLNSGHTKCISEDIKSNSMTVGKYSIVNPNDGSPLPDTHKLTV 46


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