BLASTX nr result

ID: Bupleurum21_contig00039243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039243
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29933.3| unnamed protein product [Vitis vinifera]              134   6e-30
ref|XP_002276958.1| PREDICTED: uncharacterized protein LOC100262...   134   6e-30
emb|CAN71660.1| hypothetical protein VITISV_016185 [Vitis vinifera]   134   6e-30
ref|XP_002325413.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
ref|XP_002319697.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27

>emb|CBI29933.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  134 bits (338), Expect = 6e-30
 Identities = 68/126 (53%), Positives = 91/126 (72%), Gaps = 1/126 (0%)
 Frame = +2

Query: 5   CQGDKMAYVKGAASDALQTAKKIVGENGSNFKRDAGAYCGSSFIKSNNHRRRNLSDADDQ 184
           CQ D+MAYV+GAA +ALQTA+++V E GS F +D G + GS+ ++ ++ +R+NL    DQ
Sbjct: 378 CQSDQMAYVRGAAYEALQTARRVVSEKGSKFDKDMGLFAGSNVVRGDHIQRKNLLSNGDQ 437

Query: 185 LPLFTSPESQTVDSFAGYDSFIGSPIANSYASGDLNYD-GSENWQLWRRNENGGVDISLK 361
            P   SPESQT+DSF  Y+S I SPI+    S +L+YD GS N +LWR   NGGVD+SLK
Sbjct: 438 SPFSGSPESQTLDSFVEYESLIESPISTRQVSRNLDYDRGSANRKLWRYG-NGGVDVSLK 496

Query: 362 DGLFTE 379
           DGLF+E
Sbjct: 497 DGLFSE 502


>ref|XP_002276958.1| PREDICTED: uncharacterized protein LOC100262437 [Vitis vinifera]
          Length = 615

 Score =  134 bits (338), Expect = 6e-30
 Identities = 68/126 (53%), Positives = 91/126 (72%), Gaps = 1/126 (0%)
 Frame = +2

Query: 5   CQGDKMAYVKGAASDALQTAKKIVGENGSNFKRDAGAYCGSSFIKSNNHRRRNLSDADDQ 184
           CQ D+MAYV+GAA +ALQTA+++V E GS F +D G + GS+ ++ ++ +R+NL    DQ
Sbjct: 270 CQSDQMAYVRGAAYEALQTARRVVSEKGSKFDKDMGLFAGSNVVRGDHIQRKNLLSNGDQ 329

Query: 185 LPLFTSPESQTVDSFAGYDSFIGSPIANSYASGDLNYD-GSENWQLWRRNENGGVDISLK 361
            P   SPESQT+DSF  Y+S I SPI+    S +L+YD GS N +LWR   NGGVD+SLK
Sbjct: 330 SPFSGSPESQTLDSFVEYESLIESPISTRQVSRNLDYDRGSANRKLWRYG-NGGVDVSLK 388

Query: 362 DGLFTE 379
           DGLF+E
Sbjct: 389 DGLFSE 394


>emb|CAN71660.1| hypothetical protein VITISV_016185 [Vitis vinifera]
          Length = 615

 Score =  134 bits (338), Expect = 6e-30
 Identities = 68/126 (53%), Positives = 91/126 (72%), Gaps = 1/126 (0%)
 Frame = +2

Query: 5   CQGDKMAYVKGAASDALQTAKKIVGENGSNFKRDAGAYCGSSFIKSNNHRRRNLSDADDQ 184
           CQ D+MAYV+GAA +ALQTA+++V E GS F +D G + GS+ ++ ++ +R+NL    DQ
Sbjct: 270 CQSDQMAYVRGAAYEALQTARRVVSEKGSKFDKDMGLFAGSNVVRGDHIQRKNLLSNGDQ 329

Query: 185 LPLFTSPESQTVDSFAGYDSFIGSPIANSYASGDLNYD-GSENWQLWRRNENGGVDISLK 361
            P   SPESQT+DSF  Y+S I SPI+    S +L+YD GS N +LWR   NGGVD+SLK
Sbjct: 330 SPFSGSPESQTLDSFVEYESLIESPISTRQVSRNLDYDRGSANRKLWRYG-NGGVDVSLK 388

Query: 362 DGLFTE 379
           DGLF+E
Sbjct: 389 DGLFSE 394


>ref|XP_002325413.1| predicted protein [Populus trichocarpa] gi|222862288|gb|EEE99794.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score =  127 bits (319), Expect = 9e-28
 Identities = 71/135 (52%), Positives = 90/135 (66%), Gaps = 1/135 (0%)
 Frame = +2

Query: 8   QGDKMAYVKGAASDALQTAKKIVGENGSNFKRDAGAYCGSSFIKSNNHRRRNLSDA-DDQ 184
           Q D MAYV GAA +ALQTAKKI  E GS F++ +G+  GS+F + ++  RRNLS A  DQ
Sbjct: 271 QSDPMAYVSGAAFEALQTAKKIAAEKGSKFEKSSGSITGSNFGRRDHRGRRNLSSAYGDQ 330

Query: 185 LPLFTSPESQTVDSFAGYDSFIGSPIANSYASGDLNYDGSENWQLWRRNENGGVDISLKD 364
            P   SPESQT+DSF  Y+SFI SPI+ +  S      GS N +LW   ENGGVD+SLKD
Sbjct: 331 SPASISPESQTLDSFMEYESFIESPISTTNTSSSEYDRGSVNRKLW-SFENGGVDVSLKD 389

Query: 365 GLFTEATSKAVMENF 409
           GLF+E+    + + F
Sbjct: 390 GLFSESQGSPIHDAF 404


>ref|XP_002319697.1| predicted protein [Populus trichocarpa] gi|222858073|gb|EEE95620.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score =  124 bits (311), Expect = 8e-27
 Identities = 69/127 (54%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
 Frame = +2

Query: 2   KCQGDKMAYVKGAASDALQTAKKIVGENGSNFKRDAGAYCGSSFIKSNNHRRRNLSDA-D 178
           KCQ D+MA+V GAA +ALQTAKKI  E G+ F++ +G+  GS+F + ++  RRNLS A  
Sbjct: 269 KCQSDQMAFVSGAAFEALQTAKKIATEKGTKFEKSSGSVSGSNFGRRDHRGRRNLSSAYG 328

Query: 179 DQLPLFTSPESQTVDSFAGYDSFIGSPIANSYASGDLNYDGSENWQLWRRNENGGVDISL 358
           DQ P   SPESQT+D F  Y+SF  SPI+ +  S +    GS N +LW   ENGGVDISL
Sbjct: 329 DQSPASVSPESQTLDFFMEYESFTESPISTTNVSSNECDRGSVNRKLW-SFENGGVDISL 387

Query: 359 KDGLFTE 379
           KDGLF+E
Sbjct: 388 KDGLFSE 394


Top