BLASTX nr result

ID: Bupleurum21_contig00039211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039211
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like...   125   3e-27
ref|XP_002521028.1| ring finger protein, putative [Ricinus commu...   120   2e-25
ref|XP_002517366.1| ring finger protein, putative [Ricinus commu...   114   6e-24
ref|XP_003551186.1| PREDICTED: RING-H2 finger protein ATL46-like...   113   2e-23
ref|XP_003634250.1| PREDICTED: receptor-like protein kinase HSL1...   112   3e-23

>ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
          Length = 393

 Score =  125 bits (315), Expect = 3e-27
 Identities = 64/100 (64%), Positives = 74/100 (74%), Gaps = 7/100 (7%)
 Frame = +2

Query: 8   GEPSNSNLDARRCYSMGSCQYVVADSELQVAFCPSSRG-------RSVKGRTGQNGNSSI 166
           GE S SNLDARRC+SMGS QYVVA+S+LQVA CP+          + +KGR G  GNSS 
Sbjct: 277 GETSCSNLDARRCFSMGSFQYVVANSDLQVALCPNRADAGSDAVVKLMKGRGGHTGNSST 336

Query: 167 DGDSEGKKINNRSKGESFSVSKIWLWPKKDKFPNTEDPHM 286
           DGD EGKKI+  SK ESFSVSKIWLWPKK KFP++ D H+
Sbjct: 337 DGDVEGKKISIGSKDESFSVSKIWLWPKKGKFPSSSDTHI 376


>ref|XP_002521028.1| ring finger protein, putative [Ricinus communis]
           gi|223539865|gb|EEF41445.1| ring finger protein,
           putative [Ricinus communis]
          Length = 374

 Score =  120 bits (300), Expect = 2e-25
 Identities = 65/118 (55%), Positives = 77/118 (65%), Gaps = 7/118 (5%)
 Frame = +2

Query: 8   GEPSNSNLDARRCYSMGSCQYVVADSELQVAFCP-----SSRGRSVKGRTGQNGNSSID- 169
           GE S+SNLDARRC+SMGS QYVVAD  LQVA CP     +   + VK + GQNGN+S + 
Sbjct: 257 GETSSSNLDARRCFSMGSYQYVVADLNLQVALCPGRNVGTGSFKLVKSKNGQNGNTSSND 316

Query: 170 -GDSEGKKINNRSKGESFSVSKIWLWPKKDKFPNTEDPHMXXXXXXXXXXXXXRTEIT 340
            GD+EGKKIN RSKGESFSVSKIW W +K K P++ D +M             RT  T
Sbjct: 317 IGDAEGKKINIRSKGESFSVSKIWQWSRKGKLPSSSDTYMGSSPLAVGLPWSDRTHCT 374


>ref|XP_002517366.1| ring finger protein, putative [Ricinus communis]
           gi|223543377|gb|EEF44908.1| ring finger protein,
           putative [Ricinus communis]
          Length = 376

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/95 (61%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
 Frame = +2

Query: 8   GEPSNSNLDARRCYSMGSCQYVVADSELQVAFCPSSRGRSVKGRTG--QNGNSSIDGDSE 181
           GE S+SNLDARRC+SMGS QYV+ DS+L+VA C     RSVK   G  QNG+  +DGD E
Sbjct: 263 GETSSSNLDARRCFSMGSYQYVLGDSDLRVALCTDRHARSVKPEKGNDQNGSVLVDGDLE 322

Query: 182 GKKINNRSKGESFSVSKIWLWPKKDKFPNTEDPHM 286
           GKKI+  +K ESFSVSKIWLW KK KF ++ D  M
Sbjct: 323 GKKISRVTKRESFSVSKIWLWSKKGKFSSSTDAQM 357


>ref|XP_003551186.1| PREDICTED: RING-H2 finger protein ATL46-like [Glycine max]
          Length = 384

 Score =  113 bits (282), Expect = 2e-23
 Identities = 62/102 (60%), Positives = 69/102 (67%), Gaps = 9/102 (8%)
 Frame = +2

Query: 8   GEPSNSNLDARRCYSMGSCQYVVADSELQVAFCPS---------SRGRSVKGRTGQNGNS 160
           GE S SNLD RRCYSMGS QYVVADS+LQVA CP+         S  R +KGR    GNS
Sbjct: 266 GESSTSNLDVRRCYSMGSFQYVVADSDLQVALCPNRGDGGGVSDSSMRQLKGRLTNYGNS 325

Query: 161 SIDGDSEGKKINNRSKGESFSVSKIWLWPKKDKFPNTEDPHM 286
           S D D EGKKIN   KGESFSVSKIW W KKDK   +++ H+
Sbjct: 326 STD-DVEGKKINITRKGESFSVSKIWQWSKKDKVSISQENHL 366


>ref|XP_003634250.1| PREDICTED: receptor-like protein kinase HSL1 [Vitis vinifera]
          Length = 976

 Score =  112 bits (280), Expect = 3e-23
 Identities = 60/95 (63%), Positives = 70/95 (73%), Gaps = 5/95 (5%)
 Frame = +2

Query: 17   SNSNLDARRCYSMGSCQYVVADSELQVAFC----PSSRGRSVKGRTGQNGNSSIDG-DSE 181
            S+S LDARRCYSMG CQYVV DS LQVA       SS  +  K R  Q+GN S D  D+E
Sbjct: 877  SSSYLDARRCYSMGPCQYVVGDSNLQVALSHDNGASSEEKHAKARD-QHGNCSTDHEDAE 935

Query: 182  GKKINNRSKGESFSVSKIWLWPKKDKFPNTEDPHM 286
            GKKI++R +GESFSVSKIWLWPKK+K P++ DPHM
Sbjct: 936  GKKISSRIRGESFSVSKIWLWPKKNKVPSSSDPHM 970


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