BLASTX nr result

ID: Bupleurum21_contig00039205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039205
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606036.1| Photosystem I P700 chlorophyll a apoprotein ...   181   5e-44
ref|XP_003599572.1| Photosystem I P700 chlorophyll a apoprotein ...   181   5e-44
gb|ADD63104.1| photosystem I P700 apoprotein A2 [Microlaena stip...   177   8e-43
gb|ADD63037.1| photosystem I P700 apoprotein A2 [Potamophila par...   177   8e-43
gb|AAS46120.1| photosystem I P700 apoprotein A2 [Oryza sativa Ja...   177   8e-43

>ref|XP_003606036.1| Photosystem I P700 chlorophyll a apoprotein [Medicago truncatula]
           gi|355507091|gb|AES88233.1| Photosystem I P700
           chlorophyll a apoprotein [Medicago truncatula]
          Length = 1460

 Score =  181 bits (459), Expect = 5e-44
 Identities = 84/86 (97%), Positives = 85/86 (98%)
 Frame = -3

Query: 260 EDLKGIMALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQL 81
           EDLK IMALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQL
Sbjct: 721 EDLKSIMALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQL 780

Query: 80  AIIFLWTSGNLFHVAWQGNFESWVQD 3
           AIIFLWTSGNLFHVAWQGNFE+WVQD
Sbjct: 781 AIIFLWTSGNLFHVAWQGNFEAWVQD 806



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
 Frame = -3

Query: 221 FSQGLAQDP-TTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLWTSGNLF 45
           FS+ +A+ P TT  IW   A AHDF+SH    EE + + +F++HFGQL+IIFLW SG  F
Sbjct: 40  FSRTIAKGPDTTTWIWNLHADAHDFDSHTSDLEE-ISRKVFSAHFGQLSIIFLWLSGMYF 98

Query: 44  HVAWQGNFESWVQD 3
           H A   N+E+W+ D
Sbjct: 99  HGARFSNYEAWLND 112


>ref|XP_003599572.1| Photosystem I P700 chlorophyll a apoprotein [Medicago truncatula]
            gi|355488620|gb|AES69823.1| Photosystem I P700
            chlorophyll a apoprotein [Medicago truncatula]
          Length = 1487

 Score =  181 bits (459), Expect = 5e-44
 Identities = 84/86 (97%), Positives = 85/86 (98%)
 Frame = -3

Query: 260  EDLKGIMALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQL 81
            EDLK IMALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQL
Sbjct: 748  EDLKSIMALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQL 807

Query: 80   AIIFLWTSGNLFHVAWQGNFESWVQD 3
            AIIFLWTSGNLFHVAWQGNFE+WVQD
Sbjct: 808  AIIFLWTSGNLFHVAWQGNFEAWVQD 833



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
 Frame = -3

Query: 221 FSQGLAQDP-TTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLWTSGNLF 45
           FS+ +A+ P TT  IW   A AHDF+SH    EE + + +F++HFGQL+IIFLW SG  F
Sbjct: 40  FSRTIAKGPDTTTWIWNLHADAHDFDSHTSDLEE-ISRKVFSAHFGQLSIIFLWLSGMYF 98

Query: 44  HVAWQGNFESWVQD 3
           H A   N+E+W+ D
Sbjct: 99  HGARFSNYEAWLND 112


>gb|ADD63104.1| photosystem I P700 apoprotein A2 [Microlaena stipoides]
          Length = 738

 Score =  177 bits (449), Expect = 8e-43
 Identities = 81/84 (96%), Positives = 83/84 (98%)
 Frame = -3

Query: 254 LKGIMALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAI 75
           +KGIM LRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAI
Sbjct: 1   MKGIMELRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAI 60

Query: 74  IFLWTSGNLFHVAWQGNFESWVQD 3
           IFLWTSGNLFHVAWQGNFESW+QD
Sbjct: 61  IFLWTSGNLFHVAWQGNFESWIQD 84


>gb|ADD63037.1| photosystem I P700 apoprotein A2 [Potamophila parviflora]
          Length = 738

 Score =  177 bits (449), Expect = 8e-43
 Identities = 81/84 (96%), Positives = 83/84 (98%)
 Frame = -3

Query: 254 LKGIMALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAI 75
           +KGIM LRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAI
Sbjct: 1   MKGIMELRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAI 60

Query: 74  IFLWTSGNLFHVAWQGNFESWVQD 3
           IFLWTSGNLFHVAWQGNFESW+QD
Sbjct: 61  IFLWTSGNLFHVAWQGNFESWIQD 84


>gb|AAS46120.1| photosystem I P700 apoprotein A2 [Oryza sativa Japonica Group]
           gi|42795618|gb|AAS46183.1| photosystem I P700 apoprotein
           A2 [Oryza sativa Japonica Group]
           gi|290790573|gb|ADD62833.1| photosystem I P700
           apoprotein A2 [Oryza sativa Japonica Group]
           gi|290790642|gb|ADD62901.1| photosystem I P700
           apoprotein A2 [Oryza meridionalis]
           gi|290790711|gb|ADD62969.1| photosystem I P700
           apoprotein A2 [Oryza australiensis]
          Length = 738

 Score =  177 bits (449), Expect = 8e-43
 Identities = 81/84 (96%), Positives = 83/84 (98%)
 Frame = -3

Query: 254 LKGIMALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAI 75
           +KGIM LRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAI
Sbjct: 1   MKGIMELRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAI 60

Query: 74  IFLWTSGNLFHVAWQGNFESWVQD 3
           IFLWTSGNLFHVAWQGNFESW+QD
Sbjct: 61  IFLWTSGNLFHVAWQGNFESWIQD 84


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