BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039175
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634341.1| PREDICTED: pentatricopeptide repeat-containi...   161   5e-38
emb|CBI40755.3| unnamed protein product [Vitis vinifera]              161   5e-38
ref|XP_003549322.1| PREDICTED: pentatricopeptide repeat-containi...   157   9e-37
ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containi...   155   4e-36
ref|XP_003534689.1| PREDICTED: pentatricopeptide repeat-containi...   154   6e-36

>ref|XP_003634341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 767

 Score =  161 bits (408), Expect = 5e-38
 Identities = 74/114 (64%), Positives = 95/114 (83%)
 Frame = -2

Query: 347 LSLGGQLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISA 168
           +S+G QLH      G D S+ V NAL+TMY KCGD+  AN+AFE+MP++DIISWTAMI+A
Sbjct: 376 ISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITA 435

Query: 167 FSQIGNVDKAREYFNEMPDRNVITWNSMLATYVQHGYFEEGLKLYQLMRQKGVK 6
           FSQ G+V+KAREYF++MP+RNVI+WNSMLATY+Q GY+EEGLK+Y  M ++GVK
Sbjct: 436 FSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVK 489



 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/115 (37%), Positives = 64/115 (55%)
 Frame = -2

Query: 347 LSLGGQLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISA 168
           L L  QLHGFA K    +   V  +++ MY KCG M  A   F   P   +  W +MI  
Sbjct: 143 LKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYG 202

Query: 167 FSQIGNVDKAREYFNEMPDRNVITWNSMLATYVQHGYFEEGLKLYQLMRQKGVKP 3
           +S+ G+V KA E F +MP+R+ ++WN+M++   QHG+  E L  +  M  +G +P
Sbjct: 203 YSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRP 257



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/108 (31%), Positives = 59/108 (54%)
 Frame = -2

Query: 347 LSLGGQLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISA 168
           + +  +LH     +G   SI + N L+ MY  CG +  A   F  +   ++ SW  MIS 
Sbjct: 10  IPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMISG 69

Query: 167 FSQIGNVDKAREYFNEMPDRNVITWNSMLATYVQHGYFEEGLKLYQLM 24
           F+  G + +A + F +MP+R+ ++WNSM++ Y  +G  E  +K++  M
Sbjct: 70  FADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKVFVSM 117



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/77 (35%), Positives = 47/77 (61%)
 Frame = -2

Query: 347 LSLGGQLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISA 168
           L LG Q+   A K+G   +++V N+++TMY +CG +  A   F  + +K+++SW AM++ 
Sbjct: 508 LILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAG 567

Query: 167 FSQIGNVDKAREYFNEM 117
           ++Q G   K  E F +M
Sbjct: 568 YAQNGQGRKVIEIFEKM 584


>emb|CBI40755.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  161 bits (408), Expect = 5e-38
 Identities = 74/114 (64%), Positives = 95/114 (83%)
 Frame = -2

Query: 347 LSLGGQLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISA 168
           +S+G QLH      G D S+ V NAL+TMY KCGD+  AN+AFE+MP++DIISWTAMI+A
Sbjct: 363 ISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITA 422

Query: 167 FSQIGNVDKAREYFNEMPDRNVITWNSMLATYVQHGYFEEGLKLYQLMRQKGVK 6
           FSQ G+V+KAREYF++MP+RNVI+WNSMLATY+Q GY+EEGLK+Y  M ++GVK
Sbjct: 423 FSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVK 476



 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/115 (37%), Positives = 64/115 (55%)
 Frame = -2

Query: 347 LSLGGQLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISA 168
           L L  QLHGFA K    +   V  +++ MY KCG M  A   F   P   +  W +MI  
Sbjct: 130 LKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYG 189

Query: 167 FSQIGNVDKAREYFNEMPDRNVITWNSMLATYVQHGYFEEGLKLYQLMRQKGVKP 3
           +S+ G+V KA E F +MP+R+ ++WN+M++   QHG+  E L  +  M  +G +P
Sbjct: 190 YSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRP 244



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/103 (32%), Positives = 56/103 (54%)
 Frame = -2

Query: 347 LSLGGQLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISA 168
           + +  +LH     +G   SI + N L+ MY  CG +  A   F  +   ++ SW  MIS 
Sbjct: 20  IPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMISG 79

Query: 167 FSQIGNVDKAREYFNEMPDRNVITWNSMLATYVQHGYFEEGLK 39
           F+  G + +A + F +MP+R+ ++WNSM++ Y  +G  E  +K
Sbjct: 80  FADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIK 122



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 7/122 (5%)
 Frame = -2

Query: 347 LSLGGQLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISA 168
           L LG Q+   A K+G   +++V N+++TMY +CG +  A   F  + +K+++SW AM++ 
Sbjct: 495 LILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAG 554

Query: 167 FSQIGNVDKAREYFNEM------PDRNVITWNSMLATYVQHGYFEEGLKLY-QLMRQKGV 9
           ++Q G   K  E F +M      PD+  I++ S+L+     G+  EG   +  + +  G+
Sbjct: 555 YAQNGQGRKVIEIFEKMLNIGNVPDQ--ISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGI 612

Query: 8   KP 3
            P
Sbjct: 613 SP 614


>ref|XP_003549322.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 921

 Score =  157 bits (397), Expect = 9e-37
 Identities = 72/112 (64%), Positives = 90/112 (80%)
 Frame = -2

Query: 338 GGQLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISAFSQ 159
           G  LHG+A K G D S+ VGNA+ITMY +CGD   A+ AF  MP++D ISWTAMI+AFSQ
Sbjct: 394 GELLHGYAIKSGMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQ 453

Query: 158 IGNVDKAREYFNEMPDRNVITWNSMLATYVQHGYFEEGLKLYQLMRQKGVKP 3
            G++D+AR+ F+ MP+RNVITWNSML+TY+QHG+ EEG+KLY LMR K VKP
Sbjct: 454 NGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKP 505



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/110 (29%), Positives = 55/110 (50%)
 Frame = -2

Query: 332 QLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISAFSQIG 153
           QLH    K+       + N+L+ MY KCG +  A   F  +    +  W +MI  +SQ+ 
Sbjct: 163 QLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETIFLNIESPSLFCWNSMIYGYSQLY 222

Query: 152 NVDKAREYFNEMPDRNVITWNSMLATYVQHGYFEEGLKLYQLMRQKGVKP 3
              +A   F  MP+R+ ++WN++++ + Q+G+    L  +  M   G KP
Sbjct: 223 GPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKP 272



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/77 (37%), Positives = 47/77 (61%)
 Frame = -2

Query: 347 LSLGGQLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISA 168
           + LG Q+     K G    ++V N+++TMY +CG +  A   F+ + VK++ISW AM++A
Sbjct: 523 IKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAA 582

Query: 167 FSQIGNVDKAREYFNEM 117
           F+Q G  +KA E +  M
Sbjct: 583 FAQNGLGNKAIETYEAM 599



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
 Frame = -2

Query: 332 QLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISAFSQIG 153
           +LH      G D S+ + N L+ +Y  CG +  A   F      +I +W  M+ AF   G
Sbjct: 25  KLHAQLILSGLDASLFLLNNLLHVYSNCGMVDDAFRVFREANHANIFTWNTMLHAFFDSG 84

Query: 152 NVDKAREYFNEMP--DRNVITWNSMLATYVQHGYFEEGLKLYQLM 24
            + +A   F+EMP   R+ ++W +M++ Y Q+G     +K +  M
Sbjct: 85  RMREAENLFDEMPLIVRDSVSWTTMISGYCQNGLPGHSIKTFMSM 129



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 31/91 (34%), Positives = 44/91 (48%)
 Frame = -2

Query: 347 LSLGGQLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISA 168
           L  G  LH    ++   L   +G+ LI MY KCG +  A   F  +  ++ +SWT  IS 
Sbjct: 290 LKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQNQVSWTCFISG 349

Query: 167 FSQIGNVDKAREYFNEMPDRNVITWNSMLAT 75
            +Q G  D A   FN+M   +V+     LAT
Sbjct: 350 VAQFGLGDDALALFNQMRQASVVLDEFTLAT 380


>ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 836

 Score =  155 bits (391), Expect = 4e-36
 Identities = 71/112 (63%), Positives = 89/112 (79%)
 Frame = -2

Query: 338 GGQLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISAFSQ 159
           G  LHG+A K G D  + VGNA+ITMY +CGD   A+ AF  MP++D ISWTAMI+AFSQ
Sbjct: 394 GELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQ 453

Query: 158 IGNVDKAREYFNEMPDRNVITWNSMLATYVQHGYFEEGLKLYQLMRQKGVKP 3
            G++D+AR+ F+ MP+RNVITWNSML+TY+QHG+ EEG+KLY LMR K VKP
Sbjct: 454 NGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKP 505



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/77 (37%), Positives = 48/77 (62%)
 Frame = -2

Query: 347 LSLGGQLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISA 168
           + LG Q+     K G    ++V N+++TMY +CG +  A   F+ + VK++ISW AM++A
Sbjct: 523 IKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAA 582

Query: 167 FSQIGNVDKAREYFNEM 117
           F+Q G  +KA E + +M
Sbjct: 583 FAQNGLGNKAIETYEDM 599



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/110 (29%), Positives = 55/110 (50%)
 Frame = -2

Query: 332 QLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISAFSQIG 153
           QLH    K+       + N+L+ MY KCG +  A   F  +    +  W +MI  +SQ+ 
Sbjct: 163 QLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLY 222

Query: 152 NVDKAREYFNEMPDRNVITWNSMLATYVQHGYFEEGLKLYQLMRQKGVKP 3
              +A   F  MP+R+ ++WN++++ + Q+G+    L  +  M   G KP
Sbjct: 223 GPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKP 272



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
 Frame = -2

Query: 332 QLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISAFSQIG 153
           +LH      G D S+ + N L+ MY  CG +  A   F      +I +W  M+ AF   G
Sbjct: 25  KLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTMLHAFFDSG 84

Query: 152 NVDKAREYFNEMPD--RNVITWNSMLATYVQHGYFEEGLKLYQLM 24
            + +A   F+EMP   R+ ++W +M++ Y Q+G     +K +  M
Sbjct: 85  RMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSM 129



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/91 (34%), Positives = 45/91 (49%)
 Frame = -2

Query: 347 LSLGGQLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISA 168
           L  G  LH    ++   L   +G+ LI MY KCG +  A   F  +  ++ +SWT +IS 
Sbjct: 290 LKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQNQVSWTCLISG 349

Query: 167 FSQIGNVDKAREYFNEMPDRNVITWNSMLAT 75
            +Q G  D A   FN+M   +V+     LAT
Sbjct: 350 VAQFGLRDDALALFNQMRQASVVLDEFTLAT 380


>ref|XP_003534689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 948

 Score =  154 bits (390), Expect = 6e-36
 Identities = 71/112 (63%), Positives = 89/112 (79%)
 Frame = -2

Query: 338 GGQLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISAFSQ 159
           G  LHG+A K G D S+ VGNA+ITMY +CGD   A+ AF  MP++D ISWTAMI+AFSQ
Sbjct: 394 GELLHGYAIKNGMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQ 453

Query: 158 IGNVDKAREYFNEMPDRNVITWNSMLATYVQHGYFEEGLKLYQLMRQKGVKP 3
            G++D+AR+ F+  P+RNVITWNSML+TY+QHG+ EEG+KLY LMR K VKP
Sbjct: 454 NGDIDRARQCFDMTPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKP 505



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/77 (37%), Positives = 48/77 (62%)
 Frame = -2

Query: 347 LSLGGQLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISA 168
           + LG Q+     K G    ++V N+++TMY +CG +  A   F+ + VK++ISW AM++A
Sbjct: 523 IKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAA 582

Query: 167 FSQIGNVDKAREYFNEM 117
           F+Q G  +KA E + +M
Sbjct: 583 FAQNGLGNKAIETYEDM 599



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/110 (29%), Positives = 53/110 (48%)
 Frame = -2

Query: 332 QLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISAFSQIG 153
           QLH    K+       + N+L+ MY KCG +  A   F  +    +  W +MI  +SQ+ 
Sbjct: 163 QLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLY 222

Query: 152 NVDKAREYFNEMPDRNVITWNSMLATYVQHGYFEEGLKLYQLMRQKGVKP 3
              +A   F  MP  + ++WN++++ + Q+G+    L  Y  M   G KP
Sbjct: 223 GPYEALHVFTRMPKHDHVSWNTLISVFSQYGHGIRCLSTYVEMCNLGFKP 272



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
 Frame = -2

Query: 332 QLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISAFSQIG 153
           +LH      G D S+ + N L+ MY  CG +  A   F      +I +W  M+ AF   G
Sbjct: 25  KLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFCVFREANHANIFTWNTMLHAFFDSG 84

Query: 152 NVDKAREYFNEMPD--RNVITWNSMLATYVQHGYFEEGLKLYQLM 24
            + +A   F+EMP   R+ ++W +M++ Y Q+G     +K +  M
Sbjct: 85  RMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSM 129



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/91 (32%), Positives = 44/91 (48%)
 Frame = -2

Query: 347 LSLGGQLHGFAAKIGADLSITVGNALITMYGKCGDMGSANYAFEMMPVKDIISWTAMISA 168
           L  G  LH    ++   L   +G+ LI MY KCG +  A   F  +  ++ +SWT +IS 
Sbjct: 290 LKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQNQVSWTCLISG 349

Query: 167 FSQIGNVDKAREYFNEMPDRNVITWNSMLAT 75
            +Q G  D A   FN+M   +V+     L T
Sbjct: 350 VAQFGLGDDALALFNQMRQASVVLDEFTLVT 380