BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039161
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containin...    97   1e-18
ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containin...    97   1e-18
ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containin...    87   1e-15
ref|XP_002304341.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
ref|XP_002527651.1| nucleic acid binding protein, putative [Rici...    75   7e-12

>ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cucumis sativus]
          Length = 350

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 54/122 (44%), Positives = 73/122 (59%), Gaps = 4/122 (3%)
 Frame = +3

Query: 99  FSSGDVIHIVPGEQKNNTKSQGLGSIDHEIRATTENYEVCNR----ELCADASSIFDGRL 266
           +S G+V+H++ G    N           E+ AT + Y   N      +   ++S +D R 
Sbjct: 3   YSGGNVVHVISGTSNENWPG--------EVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQ 54

Query: 267 SQNRSESEFTNKIPRISQPGDIQSSNRSTEIAKMFYKTRLCSKFQAGICPYITDCHYAHS 446
           SQ+RS SE  NK  R SQ  D+ SSNRS  I KMF+KT+LC KF+AG CPYIT+C++AHS
Sbjct: 55  SQSRSGSEPPNKKSRSSQ--DVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHS 112

Query: 447 IE 452
           IE
Sbjct: 113 IE 114


>ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cucumis sativus]
          Length = 339

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 54/122 (44%), Positives = 73/122 (59%), Gaps = 4/122 (3%)
 Frame = +3

Query: 99  FSSGDVIHIVPGEQKNNTKSQGLGSIDHEIRATTENYEVCNR----ELCADASSIFDGRL 266
           +S G+V+H++ G    N           E+ AT + Y   N      +   ++S +D R 
Sbjct: 3   YSGGNVVHVISGTSNENWPG--------EVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQ 54

Query: 267 SQNRSESEFTNKIPRISQPGDIQSSNRSTEIAKMFYKTRLCSKFQAGICPYITDCHYAHS 446
           SQ+RS SE  NK  R SQ  D+ SSNRS  I KMF+KT+LC KF+AG CPYIT+C++AHS
Sbjct: 55  SQSRSGSEPPNKKSRSSQ--DVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHS 112

Query: 447 IE 452
           IE
Sbjct: 113 IE 114


>ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Vitis vinifera]
          Length = 372

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 12/107 (11%)
 Frame = +3

Query: 168 GSIDHEIRATTENYEVCNRELCAD--ASSIFDGRLSQNRSESEFTNKIPRISQPGDIQS- 338
           GS D  + AT ++Y V N +   D  ++S ++GR SQ+RS SE  NK  R SQ  D Q  
Sbjct: 23  GSSDQLVWATEDDYAVWNGDGSGDTPSNSNYEGRQSQSRSGSEPPNKKSRNSQVVDSQGN 82

Query: 339 ---------SNRSTEIAKMFYKTRLCSKFQAGICPYITDCHYAHSIE 452
                    SNRS  I KMF+KT+LC KF+AG CPY+T+C++AHSI+
Sbjct: 83  VFGRDRDLPSNRSKAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHSIQ 129


>ref|XP_002304341.1| predicted protein [Populus trichocarpa] gi|222841773|gb|EEE79320.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 48/120 (40%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
 Frame = +3

Query: 99  FSSGDVIHIVPGEQKNNTKSQGLGSIDHE-IRATTENYEVCNR-ELCADASSIFDGRLSQ 272
           FS G+V+H++P    ++ +S  L S D   + AT ++Y   N  ++  D +S      S 
Sbjct: 7   FSGGNVVHVIP---ISDPESWILNSSDSSSVWATEDDYRDWNNSDILNDNASSNSNYQSS 63

Query: 273 NRSESEFTNKIPRISQPGDIQSSNRSTEIAKMFYKTRLCSKFQAGICPYITDCHYAHSIE 452
            RS SE  NK        + Q  N    I KMF+KT+LC KF+AG CPYIT+C++AHSIE
Sbjct: 64  TRSGSEPPNK----KSKNNSQELNSKKSIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIE 119


>ref|XP_002527651.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223532956|gb|EEF34722.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 349

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
 Frame = +3

Query: 99  FSSGDVIHIVPGEQKNNTKSQGLGSIDHEIRATTENYEVCNRELCADASSIFDGRLSQNR 278
           +S  +V+H++PG   +N       S    + AT ++Y++ N           DG      
Sbjct: 3   YSRDNVVHVIPGTGPDNWLPNSADS--GVVWATEDDYQMWNNS---------DGPNDNTP 51

Query: 279 SESEFTNKIPRISQPGDIQSSNRSTE------IAKMFYKTRLCSKFQAGICPYITDCHYA 440
           S S F ++    S+P + +S N S E      I KMF+KT+LC KF+AG CPYIT+C++A
Sbjct: 52  SNSSFQSRSG--SEPPNKKSKNNSQELSSKKSIGKMFFKTKLCCKFRAGTCPYITNCNFA 109

Query: 441 HSIE 452
           HSIE
Sbjct: 110 HSIE 113