BLASTX nr result

ID: Bupleurum21_contig00039156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039156
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306256.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002306258.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002309923.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_002516308.1| pentatricopeptide repeat-containing protein,...    78   7e-13
ref|XP_003632538.1| PREDICTED: uncharacterized protein LOC100853...    77   2e-12

>ref|XP_002306256.1| predicted protein [Populus trichocarpa] gi|222855705|gb|EEE93252.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 54/119 (45%), Positives = 77/119 (64%), Gaps = 6/119 (5%)
 Frame = -1

Query: 375 EFNFWGRKETKKCEDDGDVQSSQLEFQTE-KGDYSAYSPPLWASSSHVN-----SNLLPH 214
           EF+FWG  ET+   +D    +S++EFQ + + D+  YS PLW +    N     S LLP 
Sbjct: 12  EFDFWGASETQYYSNDRG--ASEVEFQAQVEEDFVDYSLPLWKTDMSRNVRNESSPLLPR 69

Query: 213 DHHYSSPSPKSRSQLIQNGRKELMEMVQGMPESSYELSLQDIVDDGKRIRDAKHDKDKK 37
            HHYS+ SP+SR Q++  GR++LME+V  MPESSYELSL+DIVD+ +    A+ +  K+
Sbjct: 70  GHHYSNISPRSRLQVMAEGRRKLMEIVHSMPESSYELSLKDIVDEQQISEGAQDEMPKQ 128


>ref|XP_002306258.1| predicted protein [Populus trichocarpa] gi|222855707|gb|EEE93254.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 53/119 (44%), Positives = 78/119 (65%), Gaps = 6/119 (5%)
 Frame = -1

Query: 375 EFNFWGRKETKKCEDDGDVQSSQLEFQTE-KGDYSAYSPPLWASSSHVN-----SNLLPH 214
           EF+FWG  ET+   +D    +S++EFQ + + D++ YS PLW +    N     S LLP 
Sbjct: 12  EFDFWGASETQYYSNDRG--ASEVEFQAQVEEDFADYSLPLWKTDMSRNVRNESSPLLPR 69

Query: 213 DHHYSSPSPKSRSQLIQNGRKELMEMVQGMPESSYELSLQDIVDDGKRIRDAKHDKDKK 37
            HHYS+ SP+SR +++  GR++LME+V  MPESSYELSL+DIVD+ +    A+ +  K+
Sbjct: 70  GHHYSNISPRSRLKVMAEGRRKLMEIVHSMPESSYELSLKDIVDEQQISEGAQDEMPKQ 128


>ref|XP_002309923.1| predicted protein [Populus trichocarpa] gi|222852826|gb|EEE90373.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 54/125 (43%), Positives = 74/125 (59%), Gaps = 6/125 (4%)
 Frame = -1

Query: 375 EFNFWGRKETKKCEDDGDVQSSQLEFQTE-KGDYSAYSPPLWASSSHVN-----SNLLPH 214
           +F FWG  ET+   D G    S + FQ + + D+  YS PL  +   +N     S L P 
Sbjct: 26  DFVFWGASETQYYGDRG---CSDVGFQAQFEEDFVDYSSPLRETDVSINVRNESSPLSPR 82

Query: 213 DHHYSSPSPKSRSQLIQNGRKELMEMVQGMPESSYELSLQDIVDDGKRIRDAKHDKDKKI 34
            HH SS SP+SR Q++  GRK+LMEMV  MPE SYELSL+DIVD  +   +A+  ++  I
Sbjct: 83  SHHNSSISPRSRLQVMAEGRKKLMEMVHSMPECSYELSLKDIVDVQQISEEAR--EEMAI 140

Query: 33  ERNNS 19
           +R +S
Sbjct: 141 QRTSS 145


>ref|XP_002516308.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544538|gb|EEF46055.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 13/106 (12%)
 Frame = -1

Query: 357 RKETKKCEDDGDVQ-------SSQLEFQTE-KGDYSAYSPPLWASSSHVN-----SNLLP 217
           R+ ++ C+  GDV+       S + E Q     ++  YS  LW +++  N      +LLP
Sbjct: 364 RQVSRNCDSKGDVEFNSWDENSGETELQEHFDEEFDDYSVGLWKTNTSRNFKTETDHLLP 423

Query: 216 HDHHYSSPSPKSRSQLIQNGRKELMEMVQGMPESSYELSLQDIVDD 79
           H++ YS+ SP+SR Q I   RKELM  +  MPESSYELSL+DIVDD
Sbjct: 424 HNYSYSNISPRSRLQAISEARKELMYRIHDMPESSYELSLKDIVDD 469


>ref|XP_003632538.1| PREDICTED: uncharacterized protein LOC100853376 [Vitis vinifera]
          Length = 267

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/108 (42%), Positives = 66/108 (61%), Gaps = 9/108 (8%)
 Frame = -1

Query: 375 EFNFWGRKETKKCEDDGDVQSSQLEFQTE---KGDYSAYSPPLW------ASSSHVNSNL 223
           +F F   ++T+     G    S++EFQ +   +    A SPPLW       S+ +  S+L
Sbjct: 11  DFGFLANRKTRNHGSFG----SEIEFQPQICVEDGVGASSPPLWNRKNMSESTRNETSHL 66

Query: 222 LPHDHHYSSPSPKSRSQLIQNGRKELMEMVQGMPESSYELSLQDIVDD 79
           LPHDH +S  S  S+ + I +GR+ELMEMV+ M ES+YELSL+DIVD+
Sbjct: 67  LPHDHCFSHLSRASQLERIADGRRELMEMVKNMSESTYELSLKDIVDE 114


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