BLASTX nr result

ID: Bupleurum21_contig00038988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038988
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603826.1| Helicase-like protein [Medicago truncatula] ...    86   3e-15
ref|XP_003605542.1| Helicase-like protein [Medicago truncatula] ...    82   3e-14
ref|XP_003605523.1| Helicase-like protein [Medicago truncatula] ...    82   3e-14
ref|XP_003605521.1| Helicase-like protein [Medicago truncatula] ...    82   3e-14
ref|XP_003638005.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    82   5e-14

>ref|XP_003603826.1| Helicase-like protein [Medicago truncatula]
            gi|355492874|gb|AES74077.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1679

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/101 (40%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
 Frame = +1

Query: 1    VIDDQQLEFLTLHDVDQQLRKRGKSL-DDFPTMPKLDPGLHQKSLNTLLYEENMYDRNVL 177
            V+DD QL+  TL ++D+ LR  GKS+ +D+PTMP+ D  L  +S N L+Y+E  Y++ +L
Sbjct: 1143 VLDDDQLKNYTLAEIDRLLRSHGKSMKEDYPTMPRTDISLIHESRNRLIYDELNYNQQLL 1202

Query: 178  AIEGEKCRAILNEKQAHIFESIVNNVRSNKGGLFFVNGHGG 300
             IE +K  + +  +Q +++E I++ V  N  G+FF+ G+GG
Sbjct: 1203 EIEHKKLMSTMTAEQKNVYEKIISRVDDNLPGIFFLYGYGG 1243


>ref|XP_003605542.1| Helicase-like protein [Medicago truncatula]
            gi|355506597|gb|AES87739.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1641

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/101 (38%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
 Frame = +1

Query: 1    VIDDQQLEFLTLHDVDQQLRKRGKSL-DDFPTMPKLDPGLHQKSLNTLLYEENMYDRNVL 177
            V+DD QL+  TL ++++ L   GKSL +D+PTMP+ D  L  +S N L+Y+E  Y++N+L
Sbjct: 1034 VLDDDQLKSYTLAEIERLLHSHGKSLKEDYPTMPRTDISLIHESRNRLIYDEMNYNQNML 1093

Query: 178  AIEGEKCRAILNEKQAHIFESIVNNVRSNKGGLFFVNGHGG 300
             IE  +  + +  +Q  +++ I++ V +N  G+FF+ G+GG
Sbjct: 1094 EIEHNQLMSTMTAEQRGVYDKIISRVDANLPGIFFLYGYGG 1134


>ref|XP_003605523.1| Helicase-like protein [Medicago truncatula]
            gi|355506578|gb|AES87720.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1585

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/101 (38%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
 Frame = +1

Query: 1    VIDDQQLEFLTLHDVDQQLRKRGKSL-DDFPTMPKLDPGLHQKSLNTLLYEENMYDRNVL 177
            V+DD QL+  TL ++++ L   GKSL +D+PTMP+ D  L  +S N L+Y+E  Y++N+L
Sbjct: 1034 VLDDDQLKSYTLAEIERLLHSHGKSLKEDYPTMPRTDISLIHESRNRLIYDEMNYNQNML 1093

Query: 178  AIEGEKCRAILNEKQAHIFESIVNNVRSNKGGLFFVNGHGG 300
             IE  +  + +  +Q  +++ I++ V +N  G+FF+ G+GG
Sbjct: 1094 EIEHNQLMSTMTAEQRGVYDKIISRVDANLPGIFFLYGYGG 1134


>ref|XP_003605521.1| Helicase-like protein [Medicago truncatula]
            gi|355506576|gb|AES87718.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1262

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/101 (38%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
 Frame = +1

Query: 1    VIDDQQLEFLTLHDVDQQLRKRGKSL-DDFPTMPKLDPGLHQKSLNTLLYEENMYDRNVL 177
            V+DD QL+  TL ++++ L   GKSL +D+PTMP+ D  L  +S N L+Y+E  Y++N+L
Sbjct: 1034 VLDDDQLKSYTLAEIERLLHSHGKSLKEDYPTMPRTDISLIHESRNRLIYDEMNYNQNML 1093

Query: 178  AIEGEKCRAILNEKQAHIFESIVNNVRSNKGGLFFVNGHGG 300
             IE  +  + +  +Q  +++ I++ V +N  G+FF+ G+GG
Sbjct: 1094 EIEHNQLMSTMTAEQRGVYDKIISRVDANLPGIFFLYGYGG 1134


>ref|XP_003638005.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355503940|gb|AES85143.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 841

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/101 (38%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
 Frame = +1

Query: 1   VIDDQQLEFLTLHDVDQQLRKRGKSL-DDFPTMPKLDPGLHQKSLNTLLYEENMYDRNVL 177
           V+DD QL+   L +V++ LR  G+S+ DD+P MP+ D  +  +  N L+Y+E  YD+N+L
Sbjct: 315 VLDDHQLQSYALAEVEKLLRGHGQSMKDDYPMMPQPDASMINRVRNMLMYDELKYDKNIL 374

Query: 178 AIEGEKCRAILNEKQAHIFESIVNNVRSNKGGLFFVNGHGG 300
             E +     + ++Q  +++ I++ V +NK GLFFV G+GG
Sbjct: 375 KKEHKSLMLTMTQEQRSVYDKIISRVDANKPGLFFVYGYGG 415


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