BLASTX nr result

ID: Bupleurum21_contig00038976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038976
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308143.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
emb|CBI30577.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_002313448.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
ref|XP_002269811.1| PREDICTED: uncharacterized protein LOC100266...   109   2e-22
ref|XP_002881008.1| hypothetical protein ARALYDRAFT_320665 [Arab...   103   2e-20

>ref|XP_002308143.1| predicted protein [Populus trichocarpa] gi|222854119|gb|EEE91666.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/86 (60%), Positives = 68/86 (79%)
 Frame = +3

Query: 3   SAEMDREHMMWRMRLETAVRTAMACTIVGCTTLYGPSHLRNHVQFPAFSYVTAILILSDA 182
           +A  D    +W  RL +++RTA+ACTIVGCTTLYGP+ LR+ + +PAFSYVTAILI+SDA
Sbjct: 4   AAGKDSVKALWLERLSSSLRTALACTIVGCTTLYGPARLRHFLAYPAFSYVTAILIVSDA 63

Query: 183 TLGDTLRGSWNAFCATVQVVPVSILS 260
           TL DTLRG WNA  AT+QV+ + +L+
Sbjct: 64  TLDDTLRGCWNALYATIQVMILCLLT 89


>emb|CBI30577.3| unnamed protein product [Vitis vinifera]
          Length = 556

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/81 (62%), Positives = 65/81 (80%)
 Frame = +3

Query: 24  HMMWRMRLETAVRTAMACTIVGCTTLYGPSHLRNHVQFPAFSYVTAILILSDATLGDTLR 203
           H +W  RL +A+RT +AC+IVGCTTL+GP  L+  + FPAFSYVTA+LI+SDA LGDTLR
Sbjct: 13  HAVWLCRLGSALRTVLACSIVGCTTLFGPPPLQRLLAFPAFSYVTAVLIVSDARLGDTLR 72

Query: 204 GSWNAFCATVQVVPVSILSLY 266
           G W+  CATVQVV  ++LSL+
Sbjct: 73  GCWHVLCATVQVVVPAMLSLW 93


>ref|XP_002313448.1| predicted protein [Populus trichocarpa] gi|222849856|gb|EEE87403.1|
           predicted protein [Populus trichocarpa]
          Length = 807

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/88 (60%), Positives = 66/88 (75%)
 Frame = +3

Query: 3   SAEMDREHMMWRMRLETAVRTAMACTIVGCTTLYGPSHLRNHVQFPAFSYVTAILILSDA 182
           SA  +R   +W   L +A RTA+ACTIVGCTTLYGP+ +R+H+ FPAFSYVT ILI++DA
Sbjct: 2   SAATERARAVWLRCLASAFRTALACTIVGCTTLYGPASIRHHIAFPAFSYVTVILIVTDA 61

Query: 183 TLGDTLRGSWNAFCATVQVVPVSILSLY 266
           TLGD L G W A  ATVQ V  ++LSL+
Sbjct: 62  TLGDALHGCWLALYATVQSVGPALLSLW 89


>ref|XP_002269811.1| PREDICTED: uncharacterized protein LOC100266589 [Vitis vinifera]
          Length = 823

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/81 (62%), Positives = 65/81 (80%)
 Frame = +3

Query: 24  HMMWRMRLETAVRTAMACTIVGCTTLYGPSHLRNHVQFPAFSYVTAILILSDATLGDTLR 203
           H +W  RL +A+RT +AC+IVGCTTL+GP  L+  + FPAFSYVTA+LI+SDA LGDTLR
Sbjct: 13  HAVWLCRLGSALRTVLACSIVGCTTLFGPPPLQRLLAFPAFSYVTAVLIVSDARLGDTLR 72

Query: 204 GSWNAFCATVQVVPVSILSLY 266
           G W+  CATVQVV  ++LSL+
Sbjct: 73  GCWHVLCATVQVVVPAMLSLW 93


>ref|XP_002881008.1| hypothetical protein ARALYDRAFT_320665 [Arabidopsis lyrata subsp.
           lyrata] gi|297326847|gb|EFH57267.1| hypothetical protein
           ARALYDRAFT_320665 [Arabidopsis lyrata subsp. lyrata]
          Length = 795

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/83 (61%), Positives = 60/83 (72%)
 Frame = +3

Query: 15  DREHMMWRMRLETAVRTAMACTIVGCTTLYGPSHLRNHVQFPAFSYVTAILILSDATLGD 194
           +R   MWR  L +A RTA+ACTIVG  TLYGP  +  HV FPAFSYVT ILI++DATLGD
Sbjct: 5   ERGRAMWRTCLASAFRTALACTIVGSATLYGPEWINRHVAFPAFSYVTVILIITDATLGD 64

Query: 195 TLRGSWNAFCATVQVVPVSILSL 263
           TLRG W A  AT Q V  +I++L
Sbjct: 65  TLRGCWLALYATCQSVGPAIITL 87


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