BLASTX nr result

ID: Bupleurum21_contig00038970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038970
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEK71547.1| NADH-plastoquinone oxidoreductase subunit 2 [Picr...    84   2e-14
ref|YP_087011.1| NADH dehydrogenase subunit 2 [Panax ginseng] gi...    83   2e-14
ref|YP_004222691.1| NADH-plastoquinone oxidoreductase subunit 2 ...    83   2e-14
ref|YP_740162.1| NADH-plastoquinone oxidoreductase subunit 2 [Da...    83   2e-14
tpg|DAA54955.1| TPA: hypothetical protein ZEAMMB73_762850 [Zea m...    83   3e-14

>gb|AEK71547.1| NADH-plastoquinone oxidoreductase subunit 2 [Picramnia pentandra]
          Length = 500

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/43 (97%), Positives = 42/43 (97%)
 Frame = +1

Query: 1   NYRRSPFRSNNSIELSMIVCVIASTILGISMNPIIAIAQDTLF 129
           NYRRSP RSNNSIELSMIVCVIASTILGISMNPIIAIAQDTLF
Sbjct: 458 NYRRSPLRSNNSIELSMIVCVIASTILGISMNPIIAIAQDTLF 500


>ref|YP_087011.1| NADH dehydrogenase subunit 2 [Panax ginseng]
           gi|52220872|ref|YP_087026.1| NADH dehydrogenase subunit
           2 [Panax ginseng] gi|359422189|ref|YP_004935598.1| NADH
           dehydrogenase subunit 2 (chloroplast) [Eleutherococcus
           senticosus] gi|359422204|ref|YP_004935613.1| NADH
           dehydrogenase subunit 2 (chloroplast) [Eleutherococcus
           senticosus] gi|288558974|sp|P0CD25.1|NU2C2_PANGI
           RecName: Full=NAD(P)H-quinone oxidoreductase subunit 2
           B, chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 B; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 B
           gi|288561967|sp|P0CD24.1|NU2C1_PANGI RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 2 A,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 A; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 A gi|51235358|gb|AAT98554.1|
           NADH dehydrogenase subunit 2 [Panax ginseng]
           gi|51235375|gb|AAT98571.1| NADH dehydrogenase subunit 2
           [Panax ginseng] gi|347448252|gb|AEO92664.1| NADH
           dehydrogenase subunit 2 (chloroplast) [Eleutherococcus
           senticosus] gi|347448267|gb|AEO92679.1| NADH
           dehydrogenase subunit 2 (chloroplast) [Eleutherococcus
           senticosus]
          Length = 510

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/43 (97%), Positives = 42/43 (97%)
 Frame = +1

Query: 1   NYRRSPFRSNNSIELSMIVCVIASTILGISMNPIIAIAQDTLF 129
           NYRRSPFRSNNSIELSMIVCVIASTI GISMNPIIAIAQDTLF
Sbjct: 468 NYRRSPFRSNNSIELSMIVCVIASTIPGISMNPIIAIAQDTLF 510


>ref|YP_004222691.1| NADH-plastoquinone oxidoreductase subunit 2 [Anthriscus cerefolium]
           gi|323149143|ref|YP_004222706.1| NADH-plastoquinone
           oxidoreductase subunit 2 [Anthriscus cerefolium]
           gi|156592771|gb|ABU85217.1| NADH-plastoquinone
           oxidoreductase subunit 2 [Anethum graveolens]
           gi|289645620|gb|ADD13683.1| NADH-plastoquinone
           oxidoreductase subunit 2 [Anthriscus cerefolium]
           gi|289645636|gb|ADD13699.1| NADH-plastoquinone
           oxidoreductase subunit 2 [Anthriscus cerefolium]
          Length = 510

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/43 (97%), Positives = 42/43 (97%)
 Frame = +1

Query: 1   NYRRSPFRSNNSIELSMIVCVIASTILGISMNPIIAIAQDTLF 129
           NYRRSPFRSNNSIELSMIVCVIASTI GISMNPIIAIAQDTLF
Sbjct: 468 NYRRSPFRSNNSIELSMIVCVIASTIPGISMNPIIAIAQDTLF 510


>ref|YP_740162.1| NADH-plastoquinone oxidoreductase subunit 2 [Daucus carota]
           gi|114107194|ref|YP_740177.1| NADH-plastoquinone
           oxidoreductase subunit 2 [Daucus carota]
           gi|288561933|sp|P0CC54.1|NU2C1_DAUCA RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 2 A,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 A; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 A
           gi|288562003|sp|P0CC55.1|NU2C2_DAUCA RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 2 B,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 B; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 B gi|113200952|gb|ABI32468.1|
           NADH-plastoquinone oxidoreductase subunit 2 [Daucus
           carota] gi|113200969|gb|ABI32485.1| NADH-plastoquinone
           oxidoreductase subunit 2 [Daucus carota]
          Length = 510

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/43 (97%), Positives = 42/43 (97%)
 Frame = +1

Query: 1   NYRRSPFRSNNSIELSMIVCVIASTILGISMNPIIAIAQDTLF 129
           NYRRSPFRSNNSIELSMIVCVIASTI GISMNPIIAIAQDTLF
Sbjct: 468 NYRRSPFRSNNSIELSMIVCVIASTIPGISMNPIIAIAQDTLF 510


>tpg|DAA54955.1| TPA: hypothetical protein ZEAMMB73_762850 [Zea mays]
          Length = 92

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 35/39 (89%), Positives = 36/39 (92%)
 Frame = +3

Query: 24  IKQFHRIEYDCMCDSIYYTRNINEPDYCNCSGYPFLASR 140
           IKQFHRIEYDCMCDSIYYTRNINEP  CNCSGYP LA+R
Sbjct: 51  IKQFHRIEYDCMCDSIYYTRNINEPHSCNCSGYPLLAAR 89


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