BLASTX nr result

ID: Bupleurum21_contig00038960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038960
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS02080.1| protein disulfide isomerase [Quercus suber]             75   7e-12
emb|CAC87937.1| PDI-like protein [Quercus suber]                       75   7e-12
gb|ABR18079.1| unknown [Picea sitchensis]                              72   5e-11
gb|ABK25413.1| unknown [Picea sitchensis]                              72   5e-11
ref|XP_002314533.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11

>gb|AAS02080.1| protein disulfide isomerase [Quercus suber]
          Length = 506

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
 Frame = -3

Query: 454 MPWLALPFKDPNHKKLKRIFDYRNDFNGLEEAPTLIIFGPNGEFVEPCGAEILMNFGIPA 275
           MPWLA+PFKD   +KL R FD       LE  PT+++ GP+G+ + P  AE++   GI A
Sbjct: 255 MPWLAVPFKDKCCEKLARYFD-------LETLPTVVVIGPDGKTLNPNVAELIEEHGIEA 307

Query: 274 YPFTRKRLAKL-ETEKIK---ELKMEMLWDSKTVFRVKDDGSKIMKSKL 140
           YPFT ++LA+L E EK +   +    +L   ++ F +   GSK++ S+L
Sbjct: 308 YPFTPEKLAELAEIEKARLEAQTLETILVSEESDFVIDKSGSKVLVSEL 356


>emb|CAC87937.1| PDI-like protein [Quercus suber]
          Length = 506

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
 Frame = -3

Query: 454 MPWLALPFKDPNHKKLKRIFDYRNDFNGLEEAPTLIIFGPNGEFVEPCGAEILMNFGIPA 275
           MPWLA+PFKD   +KL R FD       LE  PT+++ GP+G+ + P  AE++   GI A
Sbjct: 255 MPWLAVPFKDKCCEKLARYFD-------LETLPTVVVIGPDGKTLNPNVAELIEEHGIEA 307

Query: 274 YPFTRKRLAKL-ETEKIK---ELKMEMLWDSKTVFRVKDDGSKIMKSKL 140
           YPFT ++LA+L E EK +   +    +L   ++ F +   GSK++ S+L
Sbjct: 308 YPFTPEKLAELAEIEKARLEAQTLETILVSEESDFVIDKSGSKVLVSEL 356


>gb|ABR18079.1| unknown [Picea sitchensis]
          Length = 487

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
 Frame = -3

Query: 454 MPWLALPFKDPNHKKLKRIFDYRNDFNGLEEAPTLIIFGPNGEFVEPCGAEILMNFGIPA 275
           MPWLALPF D   KKL R F        +E  PTLII GP+G+ +      ++  +GI A
Sbjct: 162 MPWLALPFADNTQKKLSRYFR-------IEGIPTLIILGPDGKTIRNDAVGLIREYGIRA 214

Query: 274 YPFTRKRLAKLETEKIKELKME----MLWDSKTVFRVKDDGSKIMKSKL 140
           YPFT++RL  LE E+  + + +    +L   +  F +K  G++++ S+L
Sbjct: 215 YPFTKERLDDLEAEEKAKREAQTLESVLVSDERNFVIKHGGAQVLVSEL 263



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/74 (41%), Positives = 38/74 (51%)
 Frame = -3

Query: 454 MPWLALPFKDPNHKKLKRIFDYRNDFNGLEEAPTLIIFGPNGEFVEPCGAEILMNFGIPA 275
           MPWLALPF D   K L RIF  R         P+LI+ GP+G+ +       +   G  A
Sbjct: 322 MPWLALPFGDKTKKDLSRIFRVRG-------IPSLIVVGPDGKTLTDNARGAVSTHGAKA 374

Query: 274 YPFTRKRLAKLETE 233
           YPFT   L +LE E
Sbjct: 375 YPFTDAHLERLEKE 388


>gb|ABK25413.1| unknown [Picea sitchensis]
          Length = 587

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
 Frame = -3

Query: 454 MPWLALPFKDPNHKKLKRIFDYRNDFNGLEEAPTLIIFGPNGEFVEPCGAEILMNFGIPA 275
           MPWLALPF D   KKL R F        +E  PTLII GP+G+ +      ++  +GI A
Sbjct: 262 MPWLALPFADNTQKKLSRYFR-------IEGIPTLIILGPDGKTIRNDAVGLIREYGIRA 314

Query: 274 YPFTRKRLAKLETEKIKELKME----MLWDSKTVFRVKDDGSKIMKSKL 140
           YPFT++RL  LE E+  + + +    +L   +  F +K  G++++ S+L
Sbjct: 315 YPFTKERLDDLEAEEKAKREAQTLESVLVSDERNFVIKHGGAQVLVSEL 363



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/74 (41%), Positives = 38/74 (51%)
 Frame = -3

Query: 454 MPWLALPFKDPNHKKLKRIFDYRNDFNGLEEAPTLIIFGPNGEFVEPCGAEILMNFGIPA 275
           MPWLALPF D   K L RIF  R         P+LI+ GP+G+ +       +   G  A
Sbjct: 422 MPWLALPFGDKTKKDLSRIFRVRG-------IPSLIVVGPDGKTLTDNARGAVSTHGAKA 474

Query: 274 YPFTRKRLAKLETE 233
           YPFT   L +LE E
Sbjct: 475 YPFTDAHLERLEKE 488


>ref|XP_002314533.1| predicted protein [Populus trichocarpa] gi|222863573|gb|EEF00704.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
 Frame = -3

Query: 454 MPWLALPFKDPNHKKLKRIFDYRNDFNGLEEAPTLIIFGPNGEFVEPCGAEILMNFGIPA 275
           MPWLALPFKD + KKL R F+ R         P L+I G +G+ + P  AE++ + GI A
Sbjct: 225 MPWLALPFKDKSCKKLARYFELRT-------IPNLVIIGQDGKTLNPNVAELIEDHGIEA 277

Query: 274 YPFTRKR---LAKLETEKIKELKME-MLWDSKTVFRVKDDGSKIMKSKL 140
           YPFT ++   LA +E  K++   +E +L + +  F +   GSK+  S+L
Sbjct: 278 YPFTPEKLDELAAIEKAKLESQTLESVLVNGENDFVIDKSGSKVPVSEL 326


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