BLASTX nr result

ID: Bupleurum21_contig00038956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038956
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310338.1| white-brown-complex ABC transporter family [...   100   5e-41
ref|XP_003533431.1| PREDICTED: ABC transporter G family member 6...   103   2e-40
ref|XP_003612949.1| ABC transporter G family member [Medicago tr...   100   8e-39
tpg|DAA57953.1| TPA: hypothetical protein ZEAMMB73_027271 [Zea m...    95   4e-38
ref|XP_002458373.1| hypothetical protein SORBIDRAFT_03g032350 [S...    95   4e-38

>ref|XP_002310338.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222853241|gb|EEE90788.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 732

 Score =  100 bits (250), Expect(2) = 5e-41
 Identities = 56/74 (75%), Positives = 56/74 (75%)
 Frame = -2

Query: 223 DEATXXXXXXXXXXXXXXVDIIHGPSLLFLDEPTSGLDSTSAQSVIEKVQDIARSGSTVI 44
           DE T              VDIIHGPSLLFLDEPTSGLDSTSA SVIEKV  IARSGSTVI
Sbjct: 170 DEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHHIARSGSTVI 229

Query: 43  LTIHQPSSRIQLLL 2
           LTIHQPSSRIQLLL
Sbjct: 230 LTIHQPSSRIQLLL 243



 Score = 92.0 bits (227), Expect(2) = 5e-41
 Identities = 44/49 (89%), Positives = 48/49 (97%)
 Frame = -1

Query: 377 LRGRVSMDGMDVSPSLIKRTSAYIMQDDRLFPMLTVYETLMFAADFRLG 231
           L+GRVS+DGM++SPSLIKRTSAYIMQDDRLFP LTVYETLMFAADFRLG
Sbjct: 92  LKGRVSLDGMEMSPSLIKRTSAYIMQDDRLFPTLTVYETLMFAADFRLG 140


>ref|XP_003533431.1| PREDICTED: ABC transporter G family member 6-like [Glycine max]
          Length = 729

 Score =  103 bits (257), Expect(2) = 2e-40
 Identities = 57/74 (77%), Positives = 57/74 (77%)
 Frame = -2

Query: 223 DEATXXXXXXXXXXXXXXVDIIHGPSLLFLDEPTSGLDSTSAQSVIEKVQDIARSGSTVI 44
           DE T              VDIIHGPSLLFLDEPTSGLDSTSA SVIEKV DIARSGSTVI
Sbjct: 172 DEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHDIARSGSTVI 231

Query: 43  LTIHQPSSRIQLLL 2
           LTIHQPSSRIQLLL
Sbjct: 232 LTIHQPSSRIQLLL 245



 Score = 87.4 bits (215), Expect(2) = 2e-40
 Identities = 43/49 (87%), Positives = 46/49 (93%)
 Frame = -1

Query: 377 LRGRVSMDGMDVSPSLIKRTSAYIMQDDRLFPMLTVYETLMFAADFRLG 231
           L+GRVS+DG  VS SLIKRTSAYIMQ+DRLFPMLTVYETLMFAADFRLG
Sbjct: 94  LKGRVSLDGATVSASLIKRTSAYIMQEDRLFPMLTVYETLMFAADFRLG 142


>ref|XP_003612949.1| ABC transporter G family member [Medicago truncatula]
           gi|163889368|gb|ABY48138.1| ABC transporter [Medicago
           truncatula] gi|258518205|gb|ACV73543.1| STR2 [Medicago
           truncatula] gi|258518207|gb|ACV73544.1| STR2 [Medicago
           truncatula] gi|355514284|gb|AES95907.1| ABC transporter
           G family member [Medicago truncatula]
          Length = 727

 Score =  100 bits (249), Expect(2) = 8e-39
 Identities = 55/74 (74%), Positives = 57/74 (77%)
 Frame = -2

Query: 223 DEATXXXXXXXXXXXXXXVDIIHGPSLLFLDEPTSGLDSTSAQSVIEKVQDIARSGSTVI 44
           DE T              VDIIHGPSLLFLDEPTSGLDSTSA SVIEK+ DIAR+GSTVI
Sbjct: 169 DEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSALSVIEKLHDIARNGSTVI 228

Query: 43  LTIHQPSSRIQLLL 2
           LTIHQPSSRIQLLL
Sbjct: 229 LTIHQPSSRIQLLL 242



 Score = 85.1 bits (209), Expect(2) = 8e-39
 Identities = 41/49 (83%), Positives = 46/49 (93%)
 Frame = -1

Query: 377 LRGRVSMDGMDVSPSLIKRTSAYIMQDDRLFPMLTVYETLMFAADFRLG 231
           L+G+VS+DG  V+ SLIKRTSAYIMQ+DRLFPMLTVYETLMFAADFRLG
Sbjct: 91  LKGKVSLDGNSVNASLIKRTSAYIMQEDRLFPMLTVYETLMFAADFRLG 139


>tpg|DAA57953.1| TPA: hypothetical protein ZEAMMB73_027271 [Zea mays]
          Length = 764

 Score = 95.1 bits (235), Expect(2) = 4e-38
 Identities = 52/74 (70%), Positives = 55/74 (74%)
 Frame = -2

Query: 223 DEATXXXXXXXXXXXXXXVDIIHGPSLLFLDEPTSGLDSTSAQSVIEKVQDIARSGSTVI 44
           DE T              VDIIHGP+LLFLDEPTSGLDSTSA SVIEKV DIA +GSTV+
Sbjct: 215 DEGTRGVSGGERRRVSIGVDIIHGPALLFLDEPTSGLDSTSAHSVIEKVHDIACAGSTVV 274

Query: 43  LTIHQPSSRIQLLL 2
           LTIHQPSSRI LLL
Sbjct: 275 LTIHQPSSRILLLL 288



 Score = 88.2 bits (217), Expect(2) = 4e-38
 Identities = 41/49 (83%), Positives = 48/49 (97%)
 Frame = -1

Query: 377 LRGRVSMDGMDVSPSLIKRTSAYIMQDDRLFPMLTVYETLMFAADFRLG 231
           L GRV++DG+++SPSLIKR+SAY+MQDDRLFPMLTVYETLMFAADFRLG
Sbjct: 136 LDGRVALDGVEMSPSLIKRSSAYVMQDDRLFPMLTVYETLMFAADFRLG 184


>ref|XP_002458373.1| hypothetical protein SORBIDRAFT_03g032350 [Sorghum bicolor]
           gi|241930348|gb|EES03493.1| hypothetical protein
           SORBIDRAFT_03g032350 [Sorghum bicolor]
          Length = 732

 Score = 95.1 bits (235), Expect(2) = 4e-38
 Identities = 52/74 (70%), Positives = 55/74 (74%)
 Frame = -2

Query: 223 DEATXXXXXXXXXXXXXXVDIIHGPSLLFLDEPTSGLDSTSAQSVIEKVQDIARSGSTVI 44
           DE T              VDIIHGP+LLFLDEPTSGLDSTSA SVIEKV DIA +GSTV+
Sbjct: 189 DEGTRGVSGGERRRVSIGVDIIHGPALLFLDEPTSGLDSTSAHSVIEKVHDIACAGSTVV 248

Query: 43  LTIHQPSSRIQLLL 2
           LTIHQPSSRI LLL
Sbjct: 249 LTIHQPSSRILLLL 262



 Score = 88.2 bits (217), Expect(2) = 4e-38
 Identities = 41/49 (83%), Positives = 48/49 (97%)
 Frame = -1

Query: 377 LRGRVSMDGMDVSPSLIKRTSAYIMQDDRLFPMLTVYETLMFAADFRLG 231
           L GRV++DG+++SPSLIKR+SAY+MQDDRLFPMLTVYETLMFAADFRLG
Sbjct: 110 LDGRVALDGVEMSPSLIKRSSAYVMQDDRLFPMLTVYETLMFAADFRLG 158


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