BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038944
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-43
ref|XP_002304264.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
emb|CBI15219.3| unnamed protein product [Vitis vinifera]              171   6e-41
ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containi...   165   4e-39
ref|NP_190337.1| pentatricopeptide repeat-containing protein [Ar...   164   9e-39

>ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
           [Vitis vinifera]
          Length = 643

 Score =  179 bits (455), Expect = 2e-43
 Identities = 86/123 (69%), Positives = 99/123 (80%)
 Frame = -3

Query: 418 TIELKGDIHSFVTDDTSHPRNKEIYDKLEEIEKQLKIAGYVANITTKLHSIDAEGNLFRL 239
           TIELKG +H FV DD  HPR  EIY+ L+EI KQLKIAGYVA ++++LH++ AE    RL
Sbjct: 513 TIELKGKVHEFVVDDILHPRTDEIYEMLDEIGKQLKIAGYVAELSSELHNLGAEEKGNRL 572

Query: 238 SYHSEKLAIAFGVLMTPPGTKIKVAKNLSTCVDCHNFAEVFSAVYNRELVIRDRTQIHHF 59
           SYHSEKLAIAFGVL TPPGT I+VAKNL  CVDCHNFA+V S  YNRE+VIRDRT+ HHF
Sbjct: 573 SYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGAYNREVVIRDRTRFHHF 632

Query: 58  RNG 50
           R G
Sbjct: 633 REG 635


>ref|XP_002304264.1| predicted protein [Populus trichocarpa] gi|222841696|gb|EEE79243.1|
           predicted protein [Populus trichocarpa]
          Length = 499

 Score =  176 bits (446), Expect = 2e-42
 Identities = 81/123 (65%), Positives = 99/123 (80%)
 Frame = -3

Query: 418 TIELKGDIHSFVTDDTSHPRNKEIYDKLEEIEKQLKIAGYVANITTKLHSIDAEGNLFRL 239
           +IELKG +H FV DD SHP+  EIY+ L+EI KQLKIAGYVA IT++L ++DAE   + L
Sbjct: 369 SIELKGKVHEFVVDDVSHPQKDEIYEMLDEISKQLKIAGYVAEITSELPNLDAEEKRYVL 428

Query: 238 SYHSEKLAIAFGVLMTPPGTKIKVAKNLSTCVDCHNFAEVFSAVYNRELVIRDRTQIHHF 59
           SYHSEKLAIAFGVL TPPGT I++AKNL  CVDCHNFA++ S VYNR+++I D T+ HHF
Sbjct: 429 SYHSEKLAIAFGVLATPPGTTIRIAKNLRICVDCHNFAKILSGVYNRQVIITDHTRFHHF 488

Query: 58  RNG 50
           R G
Sbjct: 489 RGG 491


>emb|CBI15219.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  171 bits (433), Expect = 6e-41
 Identities = 81/117 (69%), Positives = 94/117 (80%)
 Frame = -3

Query: 400 DIHSFVTDDTSHPRNKEIYDKLEEIEKQLKIAGYVANITTKLHSIDAEGNLFRLSYHSEK 221
           D+H FV DD  HPR  EIY+ L+EI KQLKIAGYVA ++++LH++ AE    RLSYHSEK
Sbjct: 373 DVHEFVVDDILHPRTDEIYEMLDEIGKQLKIAGYVAELSSELHNLGAEEKGNRLSYHSEK 432

Query: 220 LAIAFGVLMTPPGTKIKVAKNLSTCVDCHNFAEVFSAVYNRELVIRDRTQIHHFRNG 50
           LAIAFGVL TPPGT I+VAKNL  CVDCHNFA+V S  YNRE+VIRDRT+ HHFR G
Sbjct: 433 LAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGAYNREVVIRDRTRFHHFREG 489


>ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Glycine max]
          Length = 579

 Score =  165 bits (417), Expect = 4e-39
 Identities = 74/123 (60%), Positives = 96/123 (78%)
 Frame = -3

Query: 418 TIELKGDIHSFVTDDTSHPRNKEIYDKLEEIEKQLKIAGYVANITTKLHSIDAEGNLFRL 239
           TIELKG +H FV DD SH RN+EIY+ L+EI  QL+IAGYV  ++++LH +D +   + L
Sbjct: 449 TIELKGAVHEFVVDDVSHSRNREIYETLDEINHQLRIAGYVVELSSELHKMDDKEKGYVL 508

Query: 238 SYHSEKLAIAFGVLMTPPGTKIKVAKNLSTCVDCHNFAEVFSAVYNRELVIRDRTQIHHF 59
           S+HSEKLA+AFGVL TPPGT ++VA NL  CVDCHNF ++FS VYNR++V+RD  + HHF
Sbjct: 509 SHHSEKLAVAFGVLATPPGTILRVASNLRVCVDCHNFLKLFSGVYNRDVVLRDHNRFHHF 568

Query: 58  RNG 50
           R G
Sbjct: 569 RGG 571


>ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g47530 gi|6522536|emb|CAB61979.1| putative protein
           [Arabidopsis thaliana] gi|62320272|dbj|BAD94558.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332644772|gb|AEE78293.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 591

 Score =  164 bits (414), Expect = 9e-39
 Identities = 75/123 (60%), Positives = 98/123 (79%), Gaps = 1/123 (0%)
 Frame = -3

Query: 415 IELKGDIHSFVTDDTSHPRNKEIYDKLEEIEKQLKIAGYVANITTKLHSIDAEGNL-FRL 239
           IEL+G +H F+ DD SHPR +EIY  L EI +QLKIAGYVA IT++LH++++E    + L
Sbjct: 461 IELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYAL 520

Query: 238 SYHSEKLAIAFGVLMTPPGTKIKVAKNLSTCVDCHNFAEVFSAVYNRELVIRDRTQIHHF 59
            YHSEKLAIAFG+L+TPPGT I+V KNL TCVDCHNFA+  S VY+R +++RDR++ HHF
Sbjct: 521 RYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHF 580

Query: 58  RNG 50
           + G
Sbjct: 581 KGG 583