BLASTX nr result

ID: Bupleurum21_contig00038942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038942
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551192.1| PREDICTED: uncharacterized protein LOC100784...    88   1e-16
ref|XP_003536992.1| PREDICTED: uncharacterized protein LOC100819...    86   2e-15
ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_002332238.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc...    77   2e-13

>ref|XP_003551192.1| PREDICTED: uncharacterized protein LOC100784329 [Glycine max]
          Length = 428

 Score = 87.8 bits (216), Expect(2) = 1e-16
 Identities = 44/82 (53%), Positives = 57/82 (69%)
 Frame = +2

Query: 164 IKWIGSLAEKLVQTKRSNVYHXXXXXXXXXXXXXXXXASVERAFSAMKIVKNRLRNRMGD 343
           +K I ++ EKLV+T+R  VY                  ++ERAFSAMKIVKNRLRNRMGD
Sbjct: 331 LKGIKNIYEKLVETRRHIVYPLVYLLLKLAMILPVATTTMERAFSAMKIVKNRLRNRMGD 390

Query: 344 QFLNDCLITYIEKDVFDEVANE 409
            ++NDCL+TYIEKDVF+++ NE
Sbjct: 391 AWMNDCLVTYIEKDVFNKIDNE 412



 Score = 23.5 bits (49), Expect(2) = 1e-16
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 129 ILDMRSAKEFSSLNGL 176
           I+DMR+  EFSSL G+
Sbjct: 319 IIDMRNNIEFSSLKGI 334


>ref|XP_003536992.1| PREDICTED: uncharacterized protein LOC100819269 [Glycine max]
          Length = 557

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/82 (52%), Positives = 58/82 (70%)
 Frame = +2

Query: 164 IKWIGSLAEKLVQTKRSNVYHXXXXXXXXXXXXXXXXASVERAFSAMKIVKNRLRNRMGD 343
           +K I +L+EKLV+T R  VY                 +++ERAFSAMKIVKNRLRNR+GD
Sbjct: 460 LKGIKNLSEKLVETGRHIVYPLVYLLLKLAMILPVATSTMERAFSAMKIVKNRLRNRLGD 519

Query: 344 QFLNDCLITYIEKDVFDEVANE 409
            ++NDCL+TYIEKD+F+++ NE
Sbjct: 520 AWMNDCLVTYIEKDMFNKIDNE 541


>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/82 (50%), Positives = 57/82 (69%)
 Frame = +2

Query: 164 IKWIGSLAEKLVQTKRSNVYHXXXXXXXXXXXXXXXXASVERAFSAMKIVKNRLRNRMGD 343
           I+ I SLAEK+V+TK++ ++                 A+VER FSAM IVK+RLRNRMGD
Sbjct: 691 IEGIASLAEKMVKTKKNLIFPLVYMLIKLSLLLPVATATVERVFSAMHIVKSRLRNRMGD 750

Query: 344 QFLNDCLITYIEKDVFDEVANE 409
           +++ND L+ YIEKD+FD++ NE
Sbjct: 751 KWMNDSLVVYIEKDIFDKIDNE 772



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/35 (71%), Positives = 28/35 (80%)
 Frame = +2

Query: 14  SLPADPGLRIKITKYHPNDRDKVRRPYLQKGPCQP 118
           +L ADPGLR  I +YH NDRD +RR YLQKGPCQP
Sbjct: 40  TLLADPGLRRPIYEYHINDRDAIRRAYLQKGPCQP 74


>ref|XP_002332238.1| predicted protein [Populus trichocarpa] gi|222831851|gb|EEE70328.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/82 (50%), Positives = 57/82 (69%)
 Frame = +2

Query: 164 IKWIGSLAEKLVQTKRSNVYHXXXXXXXXXXXXXXXXASVERAFSAMKIVKNRLRNRMGD 343
           I+ I SLAEK+V+TK++ ++                 A+VER FSAM IVK+RLRNRMGD
Sbjct: 23  IEGIASLAEKMVKTKKNLIFPLVYMLIKLSLLLPVATATVERVFSAMHIVKSRLRNRMGD 82

Query: 344 QFLNDCLITYIEKDVFDEVANE 409
           +++ND L+ YIEKD+FD++ NE
Sbjct: 83  KWMNDSLVVYIEKDIFDKIDNE 104


>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
            gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
            [Medicago truncatula]
          Length = 892

 Score = 77.4 bits (189), Expect(2) = 2e-13
 Identities = 39/82 (47%), Positives = 54/82 (65%)
 Frame = +2

Query: 164  IKWIGSLAEKLVQTKRSNVYHXXXXXXXXXXXXXXXXASVERAFSAMKIVKNRLRNRMGD 343
            +K I  L++K+V  K+   Y                 ++VERAFSAMKIVK+RLRNRMGD
Sbjct: 795  LKGISDLSKKMVALKKHIDYPLVYGLLKLAMILPVATSTVERAFSAMKIVKSRLRNRMGD 854

Query: 344  QFLNDCLITYIEKDVFDEVANE 409
             ++NDCL+TYIE+DV D++ +E
Sbjct: 855  DWMNDCLVTYIERDVADKIDDE 876



 Score = 22.7 bits (47), Expect(2) = 2e-13
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 129 ILDMRSAKEFSSLNGLA 179
           I DMR + EF+SL G++
Sbjct: 783 IFDMRRSVEFASLKGIS 799



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 25/42 (59%), Positives = 34/42 (80%)
 Frame = +2

Query: 5   DLSSLPADPGLRIKITKYHPNDRDKVRRPYLQKGPCQPHDHH 130
           +L  LP+DPG R K++ YHPND++ +RR YLQKGPCQP+ H+
Sbjct: 137 NLEELPSDPGKRPKMSTYHPNDQEIIRRAYLQKGPCQPNQHN 178


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