BLASTX nr result

ID: Bupleurum21_contig00038920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038920
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35907.3| unnamed protein product [Vitis vinifera]               91   7e-17
ref|XP_002274659.1| PREDICTED: protein IQ-DOMAIN 1 [Vitis vinifera]    91   7e-17
ref|XP_002888887.1| IQ-domain 8 [Arabidopsis lyrata subsp. lyrat...    87   1e-15
ref|NP_177411.1| IQ-domain 8 protein [Arabidopsis thaliana] gi|1...    86   3e-15
ref|XP_004141686.1| PREDICTED: uncharacterized protein LOC101220...    86   4e-15

>emb|CBI35907.3| unnamed protein product [Vitis vinifera]
          Length = 966

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 55/117 (47%), Positives = 66/117 (56%), Gaps = 10/117 (8%)
 Frame = -1

Query: 325 RDFMLLTRHWAAIRIQSXXXXXXXXXXXXXXXXXXXXXXXXRGRQVRKQAAVTLRCMQAL 146
           +DFM++ + WAAIRIQ+                        RGRQVRKQAAVTLRCMQAL
Sbjct: 603 KDFMVVRQEWAAIRIQTAFRGLLARRALRALKALVRLQAIVRGRQVRKQAAVTLRCMQAL 662

Query: 145 VRVQARVKAQC----------NPVKDHDNGLSQPHPVKQQVEEGGWCDSHGTIEEVK 5
           VRVQARV+AQC            V DH   L  P P+KQ   E GWCD  GT+++V+
Sbjct: 663 VRVQARVRAQCVSMASEGQAQQKVPDHLQNL--PDPIKQ--AEEGWCDRRGTVDQVR 715


>ref|XP_002274659.1| PREDICTED: protein IQ-DOMAIN 1 [Vitis vinifera]
          Length = 440

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 55/117 (47%), Positives = 66/117 (56%), Gaps = 10/117 (8%)
 Frame = -1

Query: 325 RDFMLLTRHWAAIRIQSXXXXXXXXXXXXXXXXXXXXXXXXRGRQVRKQAAVTLRCMQAL 146
           +DFM++ + WAAIRIQ+                        RGRQVRKQAAVTLRCMQAL
Sbjct: 80  KDFMVVRQEWAAIRIQTAFRGLLARRALRALKALVRLQAIVRGRQVRKQAAVTLRCMQAL 139

Query: 145 VRVQARVKAQC----------NPVKDHDNGLSQPHPVKQQVEEGGWCDSHGTIEEVK 5
           VRVQARV+AQC            V DH   L  P P+KQ   E GWCD  GT+++V+
Sbjct: 140 VRVQARVRAQCVSMASEGQAQQKVPDHLQNL--PDPIKQ--AEEGWCDRRGTVDQVR 192


>ref|XP_002888887.1| IQ-domain 8 [Arabidopsis lyrata subsp. lyrata]
           gi|297334728|gb|EFH65146.1| IQ-domain 8 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 414

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 53/113 (46%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
 Frame = -1

Query: 325 RDFMLLTRHWAAIRIQSXXXXXXXXXXXXXXXXXXXXXXXXRGRQVRKQAAVTLRCMQAL 146
           +DF L+ R WAA RIQ+                        RGRQVRKQA VTLRCMQAL
Sbjct: 85  KDFFLVKREWAATRIQAAFRAFLARQALRALKAVVRIQAIFRGRQVRKQADVTLRCMQAL 144

Query: 145 VRVQARVKAQCNPVKDHDNGLSQPHPVKQQVE------EGGWCDSHGTIEEVK 5
           VRVQARV+A CN  +   +GL    P  QQ +      E GWCDS G+I EV+
Sbjct: 145 VRVQARVRAHCN--RGPSDGLELQKPSDQQKDDPAKQAEKGWCDSPGSINEVR 195


>ref|NP_177411.1| IQ-domain 8 protein [Arabidopsis thaliana]
           gi|12323773|gb|AAG51853.1|AC010926_16 hypothetical
           protein; 51860-53619 [Arabidopsis thaliana]
           gi|38016019|gb|AAR07516.1| At1g72670 [Arabidopsis
           thaliana] gi|51969960|dbj|BAD43672.1| unknown protein
           [Arabidopsis thaliana] gi|332197238|gb|AEE35359.1|
           IQ-domain 8 protein [Arabidopsis thaliana]
          Length = 414

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 53/113 (46%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
 Frame = -1

Query: 325 RDFMLLTRHWAAIRIQSXXXXXXXXXXXXXXXXXXXXXXXXRGRQVRKQAAVTLRCMQAL 146
           +DF L+ R WAA RIQ+                        RGRQVRKQA VTLRCMQAL
Sbjct: 85  KDFFLVKREWAATRIQAAFRAFLARQALRALKAVVRIQAIFRGRQVRKQADVTLRCMQAL 144

Query: 145 VRVQARVKAQCNPVKDHDNGLSQP------HPVKQQVEEGGWCDSHGTIEEVK 5
           VRVQARV+A CN        L +P       P KQ   E GWCDS G+I EV+
Sbjct: 145 VRVQARVRAHCNRGPSDGQELEKPSDQQKDDPAKQ--AEKGWCDSPGSINEVR 195


>ref|XP_004141686.1| PREDICTED: uncharacterized protein LOC101220676 [Cucumis sativus]
           gi|449525968|ref|XP_004169988.1| PREDICTED:
           uncharacterized LOC101220676 [Cucumis sativus]
          Length = 700

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 50/107 (46%), Positives = 62/107 (57%)
 Frame = -1

Query: 325 RDFMLLTRHWAAIRIQSXXXXXXXXXXXXXXXXXXXXXXXXRGRQVRKQAAVTLRCMQAL 146
           +DF+++ +HWAA+RIQ+                        RGRQVRKQAAVTLRCMQAL
Sbjct: 80  KDFVVVRQHWAAVRIQTTFRGFLARRALRALKAVVRIQAIFRGRQVRKQAAVTLRCMQAL 139

Query: 145 VRVQARVKAQCNPVKDHDNGLSQPHPVKQQVEEGGWCDSHGTIEEVK 5
           +RVQARV+A+ +   D D             EE GWCDS GT+EEVK
Sbjct: 140 LRVQARVRAR-SVTADADQ------------EEKGWCDSRGTVEEVK 173


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