BLASTX nr result

ID: Bupleurum21_contig00038905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038905
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB42059.1| Tpv2-1c [Phaseolus vulgaris]                           69   3e-10
emb|CAN63563.1| hypothetical protein VITISV_003097 [Vitis vinifera]    69   5e-10
emb|CCA16872.1| retrotransposon protein putative [Albugo laibach...    68   7e-10
emb|CAN79780.1| hypothetical protein VITISV_041885 [Vitis vinifera]    68   7e-10
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]          67   1e-09

>emb|CAB42059.1| Tpv2-1c [Phaseolus vulgaris]
          Length = 374

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/67 (52%), Positives = 48/67 (71%)
 Frame = -2

Query: 360 KNPIHN*RSKHIDVRFHFIREKVAEKKVKLIYVKSCDQMADMFTKPLSKALLHNFIEKLG 181
           KNP+++ RSKHIDVRFHFIR+ V +  V+L++V S DQ+AD+ TKPL K     F + +G
Sbjct: 309 KNPVNHERSKHIDVRFHFIRDHVKKGIVELVHVASQDQVADI-TKPLPKVFFDKFKKMIG 367

Query: 180 MKNGNQI 160
           M +G  I
Sbjct: 368 MMDGRNI 374


>emb|CAN63563.1| hypothetical protein VITISV_003097 [Vitis vinifera]
          Length = 1052

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/61 (50%), Positives = 47/61 (77%)
 Frame = -2

Query: 360  KNPIHN*RSKHIDVRFHFIREKVAEKKVKLIYVKSCDQMADMFTKPLSKALLHNFIEKLG 181
            +NP+ + R+KH++V +HFIREKV E++V+L  +KS DQ+AD+FTK LS +   +F  +LG
Sbjct: 980  ENPVFHARTKHVEVHYHFIREKVLEEEVELKQIKSGDQVADLFTKGLSGSKFESFCHQLG 1039

Query: 180  M 178
            M
Sbjct: 1040 M 1040


>emb|CCA16872.1| retrotransposon protein putative [Albugo laibachii Nc14]
          Length = 188

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/63 (49%), Positives = 46/63 (73%)
 Frame = -2

Query: 360 KNPIHN*RSKHIDVRFHFIREKVAEKKVKLIYVKSCDQMADMFTKPLSKALLHNFIEKLG 181
           KNP+++ R+KHID+RFHFIREKV  K++++ Y  + + +A+  TK L K    +FI+ LG
Sbjct: 125 KNPVYHSRTKHIDIRFHFIREKVEAKELEIEYKPTEEMVANALTKALPKGKYEDFIQALG 184

Query: 180 MKN 172
           MKN
Sbjct: 185 MKN 187


>emb|CAN79780.1| hypothetical protein VITISV_041885 [Vitis vinifera]
          Length = 408

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/61 (50%), Positives = 47/61 (77%)
 Frame = -2

Query: 360 KNPIHN*RSKHIDVRFHFIREKVAEKKVKLIYVKSCDQMADMFTKPLSKALLHNFIEKLG 181
           +NP+ + R+KH++V +HFIREKV E++V+L  +KS DQ+AD+FTK LS +   +F  +LG
Sbjct: 336 ENPVFHARTKHVEVHYHFIREKVLEEEVELKQIKSEDQVADLFTKGLSGSKFESFCHQLG 395

Query: 180 M 178
           M
Sbjct: 396 M 396


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/57 (57%), Positives = 44/57 (77%)
 Frame = -2

Query: 360  KNPIHN*RSKHIDVRFHFIREKVAEKKVKLIYVKSCDQMADMFTKPLSKALLHNFIE 190
            KNP+ + RSKHID R+H+IRE V++K V+L YVK+ DQ+AD FTKPL +    NFI+
Sbjct: 1281 KNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKR---ENFIK 1334


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