BLASTX nr result

ID: Bupleurum21_contig00038902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038902
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]   219   2e-55
ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi...   217   7e-55
ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi...   217   7e-55
emb|CBI22140.3| unnamed protein product [Vitis vinifera]              217   7e-55
ref|XP_002303536.1| predicted protein [Populus trichocarpa] gi|2...   212   3e-53

>emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
          Length = 841

 Score =  219 bits (557), Expect = 2e-55
 Identities = 102/135 (75%), Positives = 114/135 (84%)
 Frame = +1

Query: 13  DAIKLFEEMVYYEVSPNLVTFTGLLTAFNHVGLVEEGYHCFNSMKKYGLIPSADHYSLMV 192
           DAIKLF+EMV  ++ PNL+TF GLLTA+NH GLVEEGY CF SMKKY L+PS DHY +MV
Sbjct: 415 DAIKLFDEMVDAQIFPNLITFIGLLTAYNHAGLVEEGYRCFTSMKKYNLVPSVDHYGIMV 474

Query: 193 DLLGRAGKLVEAQELIKSMPMQPHAGVWGALLSACNLHKNVELGEIAAKHCFDLEPDTKS 372
           DLLGRAG+L EA ELIKSMPMQPHAGVWGALL AC LH NVE GEIAA+HCF+LEPDT  
Sbjct: 475 DLLGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTTG 534

Query: 373 YRSLLANIYSSAGRW 417
           Y SLL+NIY+S  RW
Sbjct: 535 YXSLLSNIYASGERW 549


>ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
          Length = 580

 Score =  217 bits (553), Expect = 7e-55
 Identities = 101/135 (74%), Positives = 113/135 (83%)
 Frame = +1

Query: 13  DAIKLFEEMVYYEVSPNLVTFTGLLTAFNHVGLVEEGYHCFNSMKKYGLIPSADHYSLMV 192
           DAIKLF+EMV  ++ PN +TF GLLTA+NH GLVEEGY CF SMKKY L+PS DHY +MV
Sbjct: 419 DAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKKYNLVPSVDHYGIMV 478

Query: 193 DLLGRAGKLVEAQELIKSMPMQPHAGVWGALLSACNLHKNVELGEIAAKHCFDLEPDTKS 372
           DL GRAG+L EA ELIKSMPMQPHAGVWGALL AC LH NVE GEIAA+HCF+LEPDT  
Sbjct: 479 DLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTTG 538

Query: 373 YRSLLANIYSSAGRW 417
           YRSLL+NIY+S  RW
Sbjct: 539 YRSLLSNIYASGERW 553


>ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
           gi|296083555|emb|CBI23551.3| unnamed protein product
           [Vitis vinifera]
          Length = 580

 Score =  217 bits (553), Expect = 7e-55
 Identities = 101/135 (74%), Positives = 113/135 (83%)
 Frame = +1

Query: 13  DAIKLFEEMVYYEVSPNLVTFTGLLTAFNHVGLVEEGYHCFNSMKKYGLIPSADHYSLMV 192
           DAIKLF+EMV  ++ PN +TF GLLTA+NH GLVEEGYHCF SMKKY L+PS DHY +MV
Sbjct: 419 DAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYHCFTSMKKYNLVPSVDHYGIMV 478

Query: 193 DLLGRAGKLVEAQELIKSMPMQPHAGVWGALLSACNLHKNVELGEIAAKHCFDLEPDTKS 372
           DL GRAG+L EA ELIKSMPMQPHAGVWGALL AC LH NVE GEIAA+HCF+LEPDT  
Sbjct: 479 DLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTTG 538

Query: 373 YRSLLANIYSSAGRW 417
           Y SLL+NIY+S  RW
Sbjct: 539 YCSLLSNIYASGERW 553


>emb|CBI22140.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  217 bits (553), Expect = 7e-55
 Identities = 101/135 (74%), Positives = 113/135 (83%)
 Frame = +1

Query: 13  DAIKLFEEMVYYEVSPNLVTFTGLLTAFNHVGLVEEGYHCFNSMKKYGLIPSADHYSLMV 192
           DAIKLF+EMV  ++ PN +TF GLLTA+NH GLVEEGY CF SMKKY L+PS DHY +MV
Sbjct: 267 DAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKKYNLVPSVDHYGIMV 326

Query: 193 DLLGRAGKLVEAQELIKSMPMQPHAGVWGALLSACNLHKNVELGEIAAKHCFDLEPDTKS 372
           DL GRAG+L EA ELIKSMPMQPHAGVWGALL AC LH NVE GEIAA+HCF+LEPDT  
Sbjct: 327 DLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTTG 386

Query: 373 YRSLLANIYSSAGRW 417
           YRSLL+NIY+S  RW
Sbjct: 387 YRSLLSNIYASGERW 401


>ref|XP_002303536.1| predicted protein [Populus trichocarpa] gi|222840968|gb|EEE78515.1|
           predicted protein [Populus trichocarpa]
          Length = 596

 Score =  212 bits (539), Expect = 3e-53
 Identities = 100/138 (72%), Positives = 119/138 (86%)
 Frame = +1

Query: 4   RVSDAIKLFEEMVYYEVSPNLVTFTGLLTAFNHVGLVEEGYHCFNSMKKYGLIPSADHYS 183
           +V+DAIKLF+ MV  ++ PNL TFTGLLTA NH GLV+EGY  F+SMK +GL+PS DHY+
Sbjct: 432 KVADAIKLFDMMVDAQIHPNLATFTGLLTACNHAGLVKEGYRFFSSMKDHGLVPSTDHYA 491

Query: 184 LMVDLLGRAGKLVEAQELIKSMPMQPHAGVWGALLSACNLHKNVELGEIAAKHCFDLEPD 363
           +MVDLLGRAG+L +A ELIKSMPMQPH+GVWGALL ACN+H NVELGEIAA+HCF+LE +
Sbjct: 492 IMVDLLGRAGRLQDAYELIKSMPMQPHSGVWGALLLACNVHNNVELGEIAAQHCFNLETN 551

Query: 364 TKSYRSLLANIYSSAGRW 417
             +Y SLLANIYSSAGRW
Sbjct: 552 ATAYYSLLANIYSSAGRW 569


Top