BLASTX nr result

ID: Bupleurum21_contig00038893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038893
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   123   1e-26
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   119   3e-25
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   110   2e-22
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    91   8e-17
ref|XP_002532644.1| conserved hypothetical protein [Ricinus comm...    88   8e-16

>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  123 bits (309), Expect = 1e-26
 Identities = 61/127 (48%), Positives = 83/127 (65%), Gaps = 2/127 (1%)
 Frame = -3

Query: 464 ADLTTQLAASSEKNR-SENRPSMENMPPYQWDNPFA-GPQPRLEYGDSGHSNWKLRKLDL 291
           A L  ++ +S+E  R +  R S +    ++    F  G     E G  G   WK ++LDL
Sbjct: 25  AKLAERIDSSAESRREASERGSPDERRDWEEREGFVRGDGDGYEGGFRGGGGWKAKRLDL 84

Query: 290 PLFDGTNPDGWILRAERFFHFYRLTAEDQLEAAVVALEGDALLWYQWEHRRHPLFTWEDL 111
           P+F GTNPDGWILR ER+F FYRL AE+QLEAAVVAL+G+ALLW+QWEHR  P+  W ++
Sbjct: 85  PIFTGTNPDGWILRTERYFGFYRLAAEEQLEAAVVALDGEALLWFQWEHRHRPITGWPEM 144

Query: 110 KKLIRRR 90
           K ++ R+
Sbjct: 145 KAMLLRQ 151


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/138 (42%), Positives = 86/138 (62%), Gaps = 6/138 (4%)
 Frame = -3

Query: 485 EALAALKADLTTQLAASSEKNRSENRPSMENMPPYQWDNPFA------GPQPRLEYGDSG 324
           +A+  L+  L TQ+A S E+   + R  +  +     +          G       G  G
Sbjct: 34  KAVETLQETLATQIAVSLERATQQLREEVAKIQERGDERRDERRENDDGEGEGFGGGFRG 93

Query: 323 HSNWKLRKLDLPLFDGTNPDGWILRAERFFHFYRLTAEDQLEAAVVALEGDALLWYQWEH 144
             +W+ +KLDLP+F G NPDGWI+RAERFF FYRLT ++++EAAVV+L+G+ALLWYQWE+
Sbjct: 94  GGSWRAKKLDLPVFSGNNPDGWIIRAERFFQFYRLTEDEKVEAAVVSLDGEALLWYQWEN 153

Query: 143 RRHPLFTWEDLKKLIRRR 90
           RR P+  W +++ ++ RR
Sbjct: 154 RRRPIHRWSEMRWMLLRR 171


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 4/87 (4%)
 Frame = -3

Query: 347 RLEYGDSGHS----NWKLRKLDLPLFDGTNPDGWILRAERFFHFYRLTAEDQLEAAVVAL 180
           R E    GHS    NW+ +KLD+P FD T+PDGWILR ERFF FY LT  +++EAAVVA+
Sbjct: 157 RGEAWSRGHSGPGGNWRHKKLDMPAFDDTDPDGWILRGERFFAFYGLTDAEKMEAAVVAM 216

Query: 179 EGDALLWYQWEHRRHPLFTWEDLKKLI 99
           EGDAL WYQWE++R P   WE +K  +
Sbjct: 217 EGDALRWYQWENKRRPFRNWESMKSFV 243


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 51/133 (38%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
 Frame = -3

Query: 485  EALAALKADLTTQLAASSEKNRSENRPSMENMPPYQWDNPFAGPQPRLEYGDSGHSNWK- 309
            +A+AAL     T  AA  E              P  W+ P  G     E    G+  W+ 
Sbjct: 719  KAVAALSLGRNTTTAAQREDRAG--------WIPGVWE-PSGGGMASDEMRRGGNGEWRG 769

Query: 308  LRKLDLPLFDGTNPDGWILRAERFFHFYRLTAEDQLEAAVVALEGDALLWYQWEHRRHPL 129
             R++++P+F G NPDGWI RA+R+F  Y LT E++L AA ++L+GDAL WYQW   R   
Sbjct: 770  SRRVEMPVFTGENPDGWIFRADRYFATYGLTEEEKLVAAAMSLDGDALSWYQWTDSREVF 829

Query: 128  FTWEDLKKLIRRR 90
             +WE+LK+ +  R
Sbjct: 830  GSWENLKRRLLLR 842


>ref|XP_002532644.1| conserved hypothetical protein [Ricinus communis]
           gi|223527635|gb|EEF29747.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 462

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/67 (56%), Positives = 47/67 (70%)
 Frame = -3

Query: 305 RKLDLPLFDGTNPDGWILRAERFFHFYRLTAEDQLEAAVVALEGDALLWYQWEHRRHPLF 126
           RKL LP+F+G NPDGWI RAER+F    +   D+L+AA V LEGDAL W+QWE  R P  
Sbjct: 106 RKLKLPVFEGENPDGWIFRAERYFDINNIPVVDRLKAASVCLEGDALAWFQWEEGRRPFR 165

Query: 125 TWEDLKK 105
           +W D K+
Sbjct: 166 SWVDFKE 172


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