BLASTX nr result

ID: Bupleurum21_contig00038886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038886
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299440.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_002298267.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26
gb|ABN06178.1| Helix-loop-helix DNA-binding [Medicago truncatula]     117   1e-24
ref|XP_003539485.1| PREDICTED: uncharacterized protein LOC100787...   117   1e-24
ref|XP_003539152.1| PREDICTED: uncharacterized protein LOC100812...   116   2e-24

>ref|XP_002299440.1| predicted protein [Populus trichocarpa] gi|222846698|gb|EEE84245.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/92 (66%), Positives = 74/92 (80%)
 Frame = -3

Query: 276 DRQLIQDRLVELRELIPNGEKMSIDCLLDRTIKHMLFLQSVTKHADTLKVSDKIKDNMLF 97
           DRQ IQDR+ EL+++IP+G K SID LLDRTIKHMLFLQSVTK+A+ LK +D+ K+N L 
Sbjct: 243 DRQQIQDRIKELKQIIPDGAKCSIDALLDRTIKHMLFLQSVTKYAERLKQADEPKENRLL 302

Query: 96  KKDNYSSRGGGVTWACEYGDQSMVCPLLVEDL 1
            KDN +S  GG TWA E  DQSMVCP++VEDL
Sbjct: 303 LKDNTTS-SGGATWALEVADQSMVCPIIVEDL 333


>ref|XP_002298267.1| predicted protein [Populus trichocarpa] gi|222845525|gb|EEE83072.1|
           predicted protein [Populus trichocarpa]
          Length = 680

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/92 (65%), Positives = 72/92 (78%)
 Frame = -3

Query: 276 DRQLIQDRLVELRELIPNGEKMSIDCLLDRTIKHMLFLQSVTKHADTLKVSDKIKDNMLF 97
           DRQ+IQDR+ ELRE++PNG K SID LL+RTIKHMLFLQSVTKHAD LK +   K++ L 
Sbjct: 482 DRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGDSKESGLL 541

Query: 96  KKDNYSSRGGGVTWACEYGDQSMVCPLLVEDL 1
            K+N+    GG TWA E G QSMVCP++VEDL
Sbjct: 542 LKENFE---GGATWAFEVGSQSMVCPIIVEDL 570


>gb|ABN06178.1| Helix-loop-helix DNA-binding [Medicago truncatula]
          Length = 589

 Score =  117 bits (293), Expect = 1e-24
 Identities = 61/96 (63%), Positives = 72/96 (75%), Gaps = 4/96 (4%)
 Frame = -3

Query: 276 DRQLIQDRLVELRELIPNGEKMSIDCLLDRTIKHMLFLQSVTKHADTLKVSDK----IKD 109
           DRQ+IQDR+ ELRE++PNG K SID LL+RTIKHMLFLQSVTKHAD LK + +     K+
Sbjct: 401 DRQMIQDRVKELREIVPNGSKCSIDALLERTIKHMLFLQSVTKHADKLKQNGESKIISKE 460

Query: 108 NMLFKKDNYSSRGGGVTWACEYGDQSMVCPLLVEDL 1
             L  KDN+    GG TWA E G QSMVCP++VEDL
Sbjct: 461 GGLVLKDNFE---GGATWAYEVGSQSMVCPIIVEDL 493


>ref|XP_003539485.1| PREDICTED: uncharacterized protein LOC100787748 [Glycine max]
          Length = 936

 Score =  117 bits (292), Expect = 1e-24
 Identities = 61/96 (63%), Positives = 72/96 (75%), Gaps = 4/96 (4%)
 Frame = -3

Query: 276  DRQLIQDRLVELRELIPNGEKMSIDCLLDRTIKHMLFLQSVTKHADTLKVSDKI----KD 109
            DRQ+IQDR+ ELRE++PNG K SID LL+RTIKHMLFLQSVTKHAD LK + +     K+
Sbjct: 737  DRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIINKE 796

Query: 108  NMLFKKDNYSSRGGGVTWACEYGDQSMVCPLLVEDL 1
              L  KDN+    GG TWA E G QSMVCP++VEDL
Sbjct: 797  GGLLLKDNFE---GGATWAYEVGSQSMVCPIVVEDL 829


>ref|XP_003539152.1| PREDICTED: uncharacterized protein LOC100812899 [Glycine max]
          Length = 939

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 4/96 (4%)
 Frame = -3

Query: 276  DRQLIQDRLVELRELIPNGEKMSIDCLLDRTIKHMLFLQSVTKHADTLKVSDK----IKD 109
            DRQ+IQDR+ ELRE++PNG K SID LL++TIKHMLFLQSVTKHAD LK + +     K+
Sbjct: 737  DRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKQTGESKIVSKE 796

Query: 108  NMLFKKDNYSSRGGGVTWACEYGDQSMVCPLLVEDL 1
              L  KDN+    GG TWA E G QSMVCP++VEDL
Sbjct: 797  GGLLLKDNFE---GGATWAYEVGSQSMVCPIIVEDL 829


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