BLASTX nr result

ID: Bupleurum21_contig00038885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038885
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301544.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
ref|XP_002316074.1| predicted protein [Populus trichocarpa] gi|2...   147   9e-34
ref|XP_002333208.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_003550950.1| PREDICTED: pleiotropic drug resistance prote...   144   6e-33
ref|XP_002266393.2| PREDICTED: pleiotropic drug resistance prote...   137   1e-30

>ref|XP_002301544.1| predicted protein [Populus trichocarpa] gi|222843270|gb|EEE80817.1|
            predicted protein [Populus trichocarpa]
          Length = 1368

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/114 (63%), Positives = 85/114 (74%)
 Frame = -1

Query: 343  QGSTRELHFPTPFPRNGWEQYKACLWKQNLSYWRSPAYTFKCLAFATISSLLMGVILWQK 164
            QGS +ELHF T FP+N WEQ+KACLWKQ LSYWRSP Y    L F  +SSL+ G +LWQK
Sbjct: 1076 QGS-KELHFSTRFPQNAWEQFKACLWKQELSYWRSPKYNLVRLIFIIVSSLIFGALLWQK 1134

Query: 163  GTKINDQQDLFNIPSSVFIVLQVLGSHNCSSVIAIVASERPVLYREMFSGMYSS 2
            G KIN +QD FNI  S+FI LQ  G  NCSSV+  VA+ER ++YRE F+GMYSS
Sbjct: 1135 GQKINGEQDFFNILGSIFIFLQFAGIANCSSVMPFVATERTIVYRERFAGMYSS 1188


>ref|XP_002316074.1| predicted protein [Populus trichocarpa] gi|222865114|gb|EEF02245.1|
            predicted protein [Populus trichocarpa]
          Length = 1455

 Score =  147 bits (371), Expect = 9e-34
 Identities = 64/111 (57%), Positives = 85/111 (76%)
 Frame = -1

Query: 334  TRELHFPTPFPRNGWEQYKACLWKQNLSYWRSPAYTFKCLAFATISSLLMGVILWQKGTK 155
            +++LHFPT FP+NGWEQ KACLWKQ+LSYWRSP+Y    + F +  +LL G++ WQ+G K
Sbjct: 1165 SKDLHFPTCFPQNGWEQLKACLWKQHLSYWRSPSYNLLRIVFMSFGALLFGLLFWQQGNK 1224

Query: 154  INDQQDLFNIPSSVFIVLQVLGSHNCSSVIAIVASERPVLYREMFSGMYSS 2
            IN+QQDLF+I  S++ ++   G +NCS V+A VA ER V YRE F+GMYSS
Sbjct: 1225 INNQQDLFSIAGSMYSIIIFFGINNCSPVLAFVARERTVFYRERFAGMYSS 1275


>ref|XP_002333208.1| predicted protein [Populus trichocarpa] gi|222835114|gb|EEE73549.1|
            predicted protein [Populus trichocarpa]
          Length = 1406

 Score =  145 bits (367), Expect = 3e-33
 Identities = 64/111 (57%), Positives = 84/111 (75%)
 Frame = -1

Query: 334  TRELHFPTPFPRNGWEQYKACLWKQNLSYWRSPAYTFKCLAFATISSLLMGVILWQKGTK 155
            ++ELHFPT FP+NGWEQ KACLWKQNLSYWRSP+Y    + F +  + L G++ WQ+G K
Sbjct: 1116 SKELHFPTRFPQNGWEQLKACLWKQNLSYWRSPSYNLVRIVFMSSGASLFGLLYWQQGKK 1175

Query: 154  INDQQDLFNIPSSVFIVLQVLGSHNCSSVIAIVASERPVLYREMFSGMYSS 2
            I ++QDLFNI  S++ ++   G +NCSSV+  V +ER VLYRE F+GMYSS
Sbjct: 1176 IKNEQDLFNIVGSMYALIVFFGINNCSSVLPFVTTERTVLYRERFAGMYSS 1226


>ref|XP_003550950.1| PREDICTED: pleiotropic drug resistance protein 3-like [Glycine max]
          Length = 1452

 Score =  144 bits (364), Expect = 6e-33
 Identities = 61/111 (54%), Positives = 86/111 (77%)
 Frame = -1

Query: 337  STRELHFPTPFPRNGWEQYKACLWKQNLSYWRSPAYTFKCLAFATISSLLMGVILWQKGT 158
            ++R+L+FP+ FP+NGWEQ+KACLWKQ+LSYWRSP+Y    + F  +SSLL G++ W++G 
Sbjct: 1161 NSRDLYFPSHFPQNGWEQFKACLWKQHLSYWRSPSYNLMRIIFVAVSSLLFGILFWKQGK 1220

Query: 157  KINDQQDLFNIPSSVFIVLQVLGSHNCSSVIAIVASERPVLYREMFSGMYS 5
            KIN QQD+FN+  +++      G +NCS+V+  VA+ER VLYRE F+GMYS
Sbjct: 1221 KINSQQDVFNVFGAMYSAALFFGINNCSTVLPYVATERTVLYRERFAGMYS 1271


>ref|XP_002266393.2| PREDICTED: pleiotropic drug resistance protein 3-like [Vitis
            vinifera]
          Length = 1492

 Score =  137 bits (344), Expect = 1e-30
 Identities = 61/111 (54%), Positives = 82/111 (73%)
 Frame = -1

Query: 334  TRELHFPTPFPRNGWEQYKACLWKQNLSYWRSPAYTFKCLAFATISSLLMGVILWQKGTK 155
            +R+L+FP  FP+NGWEQ+ ACLWK +LSYWRSP Y F    F  +++ L G   WQKG K
Sbjct: 1202 SRDLNFPNRFPQNGWEQFMACLWKLHLSYWRSPEYNFVRFLFMILAAFLFGATFWQKGQK 1261

Query: 154  INDQQDLFNIPSSVFIVLQVLGSHNCSSVIAIVASERPVLYREMFSGMYSS 2
            I++ QDLFNI  S+++ +  LG +NCS+V+  VA+ER V+YRE F+GMYSS
Sbjct: 1262 IDNAQDLFNILGSMYLAVIFLGINNCSTVLPHVATERTVVYREKFAGMYSS 1312


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