BLASTX nr result

ID: Bupleurum21_contig00038872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038872
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34813.3| unnamed protein product [Vitis vinifera]              114   8e-24
ref|XP_002279636.1| PREDICTED: putative DNA-binding protein ESCA...   112   3e-23
ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCA...   111   5e-23
ref|XP_002301300.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|XP_002511734.1| ESC, putative [Ricinus communis] gi|22354891...   105   3e-21

>emb|CBI34813.3| unnamed protein product [Vitis vinifera]
          Length = 240

 Score =  114 bits (285), Expect = 8e-24
 Identities = 62/99 (62%), Positives = 74/99 (74%)
 Frame = +3

Query: 3   VVGGSVVGQLIASGPVVIMAASFSNAAYERLPLEDEESSVPGRGGSLESXXXXXXXXXXX 182
           VVGGSVVGQL+ASGPVVIMAASFSNAAYERLPLE+E+ ++P  GGSL S           
Sbjct: 146 VVGGSVVGQLLASGPVVIMAASFSNAAYERLPLEEEDPALPMPGGSLGS--PGGQPQQPQ 203

Query: 183 XXMADPNTSLFQGMSPPNLVNSCQVPSDQAYWSGARPPY 299
             +ADPN  LF G+ PPNL+NS Q+P+ +AYW+  RPPY
Sbjct: 204 QLLADPNAPLFHGL-PPNLLNSIQLPA-EAYWATGRPPY 240


>ref|XP_002279636.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
           gi|147867329|emb|CAN81187.1| hypothetical protein
           VITISV_029906 [Vitis vinifera]
           gi|296089162|emb|CBI38865.3| unnamed protein product
           [Vitis vinifera]
          Length = 300

 Score =  112 bits (280), Expect = 3e-23
 Identities = 65/104 (62%), Positives = 72/104 (69%), Gaps = 5/104 (4%)
 Frame = +3

Query: 3   VVGGSVVGQLIASGPVVIMAASFSNAAYERLPLEDEESSVPGRG-GSLES----XXXXXX 167
           VVGGSVVG L+ASGPVVIMAASF NAAYERLPLEDEE  VP  G G L S          
Sbjct: 199 VVGGSVVGPLLASGPVVIMAASFGNAAYERLPLEDEEPQVPIPGSGPLGSPGMVGQQPQQ 258

Query: 168 XXXXXXXMADPNTSLFQGMSPPNLVNSCQVPSDQAYWSGARPPY 299
                  + DPN SLFQG+ PPNL+NSCQ+P+ +AYW  ARPPY
Sbjct: 259 QQQQQQLLPDPNASLFQGL-PPNLLNSCQLPA-EAYWGTARPPY 300


>ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Vitis
           vinifera]
          Length = 302

 Score =  111 bits (278), Expect = 5e-23
 Identities = 62/106 (58%), Positives = 74/106 (69%), Gaps = 7/106 (6%)
 Frame = +3

Query: 3   VVGGSVVGQLIASGPVVIMAASFSNAAYERLPLEDEESSVPGRGGSLES-------XXXX 161
           VVGGSVVGQL+ASGPVVIMAASFSNAAYERLPLE+E+ ++P  GGSL S           
Sbjct: 199 VVGGSVVGQLLASGPVVIMAASFSNAAYERLPLEEEDPALPMPGGSLGSPGGVGQHQPPQ 258

Query: 162 XXXXXXXXXMADPNTSLFQGMSPPNLVNSCQVPSDQAYWSGARPPY 299
                    +ADPN  LF G+ PPNL+NS Q+P+ +AYW+  RPPY
Sbjct: 259 QQPQQPQQLLADPNAPLFHGL-PPNLLNSIQLPA-EAYWATGRPPY 302


>ref|XP_002301300.1| predicted protein [Populus trichocarpa] gi|222843026|gb|EEE80573.1|
           predicted protein [Populus trichocarpa]
          Length = 298

 Score =  107 bits (268), Expect = 8e-22
 Identities = 65/104 (62%), Positives = 73/104 (70%), Gaps = 5/104 (4%)
 Frame = +3

Query: 3   VVGGSVVGQLIASGPVVIMAASFSNAAYERLPLEDEESS--VPGRG--GSLESXXXXXXX 170
           VVGGSVVG L+ASGPVVIMAASF NAAYERLPLE++ES   VPG G  GS          
Sbjct: 197 VVGGSVVGPLLASGPVVIMAASFGNAAYERLPLEEDESQTPVPGTGPLGSPGVSSIGQQN 256

Query: 171 XXXXXXMADPNTSLFQGMSPPNLVNSCQVPSDQAYW-SGARPPY 299
                 M DPNTSLFQG+ P NL+NS Q+PS +AYW +G RPPY
Sbjct: 257 QQQHQLMQDPNTSLFQGL-PQNLLNSVQLPS-EAYWGTGGRPPY 298


>ref|XP_002511734.1| ESC, putative [Ricinus communis] gi|223548914|gb|EEF50403.1| ESC,
           putative [Ricinus communis]
          Length = 299

 Score =  105 bits (263), Expect = 3e-21
 Identities = 60/102 (58%), Positives = 71/102 (69%), Gaps = 3/102 (2%)
 Frame = +3

Query: 3   VVGGSVVGQLIASGPVVIMAASFSNAAYERLPLEDEESSVPGRG-GSLES--XXXXXXXX 173
           VVGGSVVG L+ASGPVVIMAASF NAAYERLPLE+++  VP  G G L+S          
Sbjct: 200 VVGGSVVGPLLASGPVVIMAASFGNAAYERLPLEEDDGQVPVPGSGPLDSPGVVGQTQPQ 259

Query: 174 XXXXXMADPNTSLFQGMSPPNLVNSCQVPSDQAYWSGARPPY 299
                M DPN  LFQG+ PPNL+NS Q+P+ +AYW  ARPP+
Sbjct: 260 QPQQLMQDPNPPLFQGL-PPNLLNSVQLPA-EAYWGAARPPF 299


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