BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038871
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31
ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containi...   130   9e-29
ref|XP_002518071.1| pentatricopeptide repeat-containing protein,...   129   3e-28
ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|NP_171976.1| pentatricopeptide repeat-containing protein [Ar...   119   3e-25

>ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  139 bits (351), Expect = 2e-31
 Identities = 68/108 (62%), Positives = 80/108 (74%)
 Frame = +1

Query: 7   LFEAMPERKVGSWNCLINGFMLKGEIDVAEEYFNSMPERNVVSWTTIISGFLHKGEFKKA 186
           LFEAMPER  GSWN LINGF+  G++D A E F  MPE+NVVSWTT+I+GF   G+ +KA
Sbjct: 230 LFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKA 289

Query: 187 LSMFSRMLVEGVTPNERTIVLALSACAKAGALDTGVRIHSYAWCSGFQ 330
           LSMF RML EGV PN+ T+V AL AC K GAL  G RIH+Y   +GFQ
Sbjct: 290 LSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQ 337


>ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
           gi|449505311|ref|XP_004162432.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
          Length = 679

 Score =  130 bits (328), Expect = 9e-29
 Identities = 63/112 (56%), Positives = 82/112 (73%)
 Frame = +1

Query: 4   ELFEAMPERKVGSWNCLINGFMLKGEIDVAEEYFNSMPERNVVSWTTIISGFLHKGEFKK 183
           ELF++MP++  GSWN LINGFM  G++  A+E F  MPE+NVVSWTT+++GF   G+ +K
Sbjct: 231 ELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEK 290

Query: 184 ALSMFSRMLVEGVTPNERTIVLALSACAKAGALDTGVRIHSYAWCSGFQTEI 339
           AL  F  ML EG  PN+ TIV ALSACAK GALD G+RIH+Y   +GF+  +
Sbjct: 291 ALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNL 342


>ref|XP_002518071.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542667|gb|EEF44204.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 404

 Score =  129 bits (323), Expect = 3e-28
 Identities = 63/110 (57%), Positives = 82/110 (74%)
 Frame = +1

Query: 1   VELFEAMPERKVGSWNCLINGFMLKGEIDVAEEYFNSMPERNVVSWTTIISGFLHKGEFK 180
           +ELFE MP R   SWN LINGF   G+++ A E+F+ MP ++VVSWTT+++GF   G+ +
Sbjct: 223 LELFEDMPLRNTASWNSLINGFFKIGDLEQAIEHFDRMPVKDVVSWTTMVNGFSQNGDHE 282

Query: 181 KALSMFSRMLVEGVTPNERTIVLALSACAKAGALDTGVRIHSYAWCSGFQ 330
           KALS+FSRML E V PN+ TIV ALSACAK GAL+ G+RIH Y   +GF+
Sbjct: 283 KALSVFSRMLDEDVKPNDFTIVSALSACAKIGALEAGLRIHKYLKDNGFR 332


>ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|222847424|gb|EEE84971.1|
           predicted protein [Populus trichocarpa]
          Length = 719

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/103 (59%), Positives = 79/103 (76%)
 Frame = +1

Query: 1   VELFEAMPERKVGSWNCLINGFMLKGEIDVAEEYFNSMPERNVVSWTTIISGFLHKGEFK 180
           V+LF+AMP+++  SW+ LI+GF   G++D A E F+ MPE+NVVSWTT++ GF   G+ +
Sbjct: 270 VKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSE 329

Query: 181 KALSMFSRMLVEGVTPNERTIVLALSACAKAGALDTGVRIHSY 309
           KALSMFS+ML EGV PN  TIV ALSACAK G L+ G+RIH Y
Sbjct: 330 KALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKY 372


>ref|NP_171976.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75192500|sp|Q9MAT2.1|PPR10_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g04840 gi|7211995|gb|AAF40466.1|AC004809_24 F13M7.17
           [Arabidopsis thaliana] gi|332189629|gb|AEE27750.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 665

 Score =  119 bits (298), Expect = 3e-25
 Identities = 54/110 (49%), Positives = 79/110 (71%)
 Frame = +1

Query: 7   LFEAMPERKVGSWNCLINGFMLKGEIDVAEEYFNSMPERNVVSWTTIISGFLHKGEFKKA 186
           LF +MPER  GSW+ LI G++  GE++ A++ F  MPE+NVVSWTT+I+GF   G+++ A
Sbjct: 218 LFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETA 277

Query: 187 LSMFSRMLVEGVTPNERTIVLALSACAKAGALDTGVRIHSYAWCSGFQTE 336
           +S +  ML +G+ PNE TI   LSAC+K+GAL +G+RIH Y   +G + +
Sbjct: 278 ISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLD 327



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/90 (30%), Positives = 52/90 (57%)
 Frame = +1

Query: 25  ERKVGSWNCLINGFMLKGEIDVAEEYFNSMPERNVVSWTTIISGFLHKGEFKKALSMFSR 204
           +R +G+   L++ +   GE+D A   F++M  ++++SWT +I G+   G F +A+  F +
Sbjct: 327 DRAIGT--ALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQ 384

Query: 205 MLVEGVTPNERTIVLALSACAKAGALDTGV 294
           M+  G  P+E   +  L+AC  +  +D G+
Sbjct: 385 MMYSGEKPDEVVFLAVLTACLNSSEVDLGL 414