BLASTX nr result
ID: Bupleurum21_contig00038867
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00038867
(599 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531431.1| pentatricopeptide repeat-containing protein,... 324 8e-87
emb|CBI30945.3| unnamed protein product [Vitis vinifera] 323 1e-86
ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containi... 323 1e-86
ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containi... 321 7e-86
emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera] 321 7e-86
>ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528950|gb|EEF30943.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 737
Score = 324 bits (830), Expect = 8e-87
Identities = 152/199 (76%), Positives = 173/199 (86%)
Frame = +2
Query: 2 LLEKMTTEHNLLHDQVTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSF 181
L+EKM ++ L DQVTYN L+H+LSKHGH DEAL FLRE E +GF +DKVGYSAIV+SF
Sbjct: 298 LMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSF 357
Query: 182 CQAGNMERAKELVNEMFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNT 361
C G M+RAKE+VNEM K C PDVVTYTAVVNG C +GKV++AK++LQQMYKHGCKPNT
Sbjct: 358 CMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNT 417
Query: 362 VSYTALLNGLCRSGKTSEAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSE 541
VSYTALLNGLC+ G + EAREMMNTSEEDWWTPNAITYSVVMHG RREGKLSEAC+VV E
Sbjct: 418 VSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVRE 477
Query: 542 MIQKGFYPTPVEINLLIQS 598
M+ KGF+PTPVEINLLI+S
Sbjct: 478 MLTKGFFPTPVEINLLIKS 496
Score = 101 bits (251), Expect = 1e-19
Identities = 48/190 (25%), Positives = 99/190 (52%)
Frame = +2
Query: 23 EHNLLHDQVTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSFCQAGNME 202
+H + V+Y L++ L +HG+ EA + +E + + + YS ++H + G +
Sbjct: 410 KHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLS 469
Query: 203 RAKELVNEMFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNTVSYTALL 382
A ++V EM K P V ++ C K+++AK+ +++ GC N V++T ++
Sbjct: 470 EACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVI 529
Query: 383 NGLCRSGKTSEAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSEMIQKGFY 562
+G C+S A +++ + P+A+T++ ++ ++G++ EA +M++KG
Sbjct: 530 HGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLD 589
Query: 563 PTPVEINLLI 592
PTPV +I
Sbjct: 590 PTPVTYRAVI 599
Score = 83.2 bits (204), Expect = 3e-14
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Frame = +2
Query: 170 VHSFCQAGNMERAKELVNEMFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGC 349
+H A +E+A + M L P+VVTY ++ G+C + +V+ A +L+ +M GC
Sbjct: 213 IHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGC 272
Query: 350 KPNTVSYTALLNGLCRSGKTSEAREMMNTSEED-WWTPNAITYSVVMHGFRREGKLSEAC 526
P+ VSY ++ LC+ + E R +M +D P+ +TY+ ++H + G EA
Sbjct: 273 PPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEAL 332
Query: 527 EVVSEMIQKGFYPTPVEINLLIQS 598
E + E ++GF V + ++ S
Sbjct: 333 EFLRETEERGFQVDKVGYSAIVNS 356
Score = 81.6 bits (200), Expect = 9e-14
Identities = 38/128 (29%), Positives = 72/128 (56%)
Frame = +2
Query: 47 VTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSFCQAGNMERAKELVNE 226
V N LI L +EA F+ E +G ++ V ++ ++H FCQ+ N++ A L+++
Sbjct: 488 VEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDD 547
Query: 227 MFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNTVSYTALLNGLCRSGK 406
M+L PD VT+TA+++ G++++A +M K G P V+Y A+++ C+ G+
Sbjct: 548 MYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGR 607
Query: 407 TSEAREMM 430
E +++
Sbjct: 608 VEELIKLL 615
Score = 65.1 bits (157), Expect = 9e-09
Identities = 41/186 (22%), Positives = 85/186 (45%), Gaps = 1/186 (0%)
Frame = +2
Query: 38 HDQVTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSFCQAGNMERAKEL 217
HD + Y ++ VLSK A LR +G ++ ++ S+ +AG + A ++
Sbjct: 134 HDPIVYYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQV 193
Query: 218 VNEMFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNTVSYTALLNGLCR 397
+ M P+++ ++ K+++A + L++M G PN V+Y L+ G C
Sbjct: 194 LTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCD 253
Query: 398 SGKTSEAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSEMIQKG-FYPTPV 574
+ A E++ P+ ++Y VM ++ ++ E ++ +M++ +P V
Sbjct: 254 LYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQV 313
Query: 575 EINLLI 592
N L+
Sbjct: 314 TYNTLV 319
>emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 323 bits (829), Expect = 1e-86
Identities = 152/199 (76%), Positives = 175/199 (87%)
Frame = +2
Query: 2 LLEKMTTEHNLLHDQVTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSF 181
L+EKM + NLL DQVTYN +H+LSKHGHGDEAL FLREAE + F +DKVGYSAIVHSF
Sbjct: 359 LMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSF 418
Query: 182 CQAGNMERAKELVNEMFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNT 361
C+ G M++AKE+VNEMF K CIPDVVTYT+V+NG C KVDQAK++L+QMYKHGCKPNT
Sbjct: 419 CREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNT 478
Query: 362 VSYTALLNGLCRSGKTSEAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSE 541
VSYTALLNGLC++G + EAREMMN SEEDWW PNAITYSV+MHGFRREGK SEAC++V E
Sbjct: 479 VSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVRE 538
Query: 542 MIQKGFYPTPVEINLLIQS 598
MI+KGF+PTPVEINLLIQS
Sbjct: 539 MIKKGFFPTPVEINLLIQS 557
Score = 102 bits (255), Expect = 4e-20
Identities = 51/190 (26%), Positives = 98/190 (51%)
Frame = +2
Query: 23 EHNLLHDQVTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSFCQAGNME 202
+H + V+Y L++ L K+G+ EA + +E + + + YS ++H F + G
Sbjct: 471 KHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSS 530
Query: 203 RAKELVNEMFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNTVSYTALL 382
A +LV EM K P V ++ C KVD+AK+ ++Q +GC N V++T ++
Sbjct: 531 EACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVI 590
Query: 383 NGLCRSGKTSEAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSEMIQKGFY 562
+G C+ A +++ P+ +TY+ ++ ++G++ EA ++ +M++ G
Sbjct: 591 HGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLI 650
Query: 563 PTPVEINLLI 592
PTPV +I
Sbjct: 651 PTPVTYRTVI 660
Score = 98.2 bits (243), Expect = 1e-18
Identities = 54/180 (30%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
Frame = +2
Query: 56 NNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSFCQAGNMERAKELVNEMFL 235
N IHVL D+A+ FL + + + Y+ ++ +C +E A EL+ EM
Sbjct: 271 NTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPF 330
Query: 236 KRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYK-HGCKPNTVSYTALLNGLCRSGKTS 412
K C PD ++Y V+ C ++ + + L+++M K P+ V+Y ++ L + G
Sbjct: 331 KGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGD 390
Query: 413 EAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSEMIQKGFYPTPVEINLLI 592
EA E + +EE + + + YS ++H F REG++ +A E+V+EM KG P V +I
Sbjct: 391 EALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVI 450
Score = 94.7 bits (234), Expect = 1e-17
Identities = 48/180 (26%), Positives = 91/180 (50%)
Frame = +2
Query: 14 MTTEHNLLHDQVTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSFCQAG 193
M+ E + + +TY+ L+H + G EA +RE +GF V + ++ S CQ
Sbjct: 503 MSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEE 562
Query: 194 NMERAKELVNEMFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNTVSYT 373
++ AK + + C +VV +T V++GFC ++ A LL MY P+ V+YT
Sbjct: 563 KVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYT 622
Query: 374 ALLNGLCRSGKTSEAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSEMIQK 553
+++ L + G+ EA ++ P +TY V+H + R G++ + +++ +M+ +
Sbjct: 623 TIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR 682
Score = 84.3 bits (207), Expect = 1e-14
Identities = 48/186 (25%), Positives = 97/186 (52%), Gaps = 2/186 (1%)
Frame = +2
Query: 47 VTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSFCQAGNMERAKELVNE 226
V N LI L + DEA F+ + G ++ V ++ ++H FCQ ++E A L+++
Sbjct: 549 VEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDD 608
Query: 227 MFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNTVSYTALLNGLCRSGK 406
M+L PDVVTYT +++ G++++A +L +M + G P V+Y +++ CR G+
Sbjct: 609 MYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGR 668
Query: 407 TSEAREMMN--TSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSEMIQKGFYPTPVEI 580
+ +++ S ++ T Y+ V+ G L +A +++ ++++
Sbjct: 669 VEDLLKLLEKMLSRQECRT----AYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTC 724
Query: 581 NLLIQS 598
++LI+S
Sbjct: 725 HMLIES 730
>ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 323 bits (829), Expect = 1e-86
Identities = 152/199 (76%), Positives = 175/199 (87%)
Frame = +2
Query: 2 LLEKMTTEHNLLHDQVTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSF 181
L+EKM + NLL DQVTYN +H+LSKHGHGDEAL FLREAE + F +DKVGYSAIVHSF
Sbjct: 296 LMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSF 355
Query: 182 CQAGNMERAKELVNEMFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNT 361
C+ G M++AKE+VNEMF K CIPDVVTYT+V+NG C KVDQAK++L+QMYKHGCKPNT
Sbjct: 356 CREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNT 415
Query: 362 VSYTALLNGLCRSGKTSEAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSE 541
VSYTALLNGLC++G + EAREMMN SEEDWW PNAITYSV+MHGFRREGK SEAC++V E
Sbjct: 416 VSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVRE 475
Query: 542 MIQKGFYPTPVEINLLIQS 598
MI+KGF+PTPVEINLLIQS
Sbjct: 476 MIKKGFFPTPVEINLLIQS 494
Score = 102 bits (255), Expect = 4e-20
Identities = 51/190 (26%), Positives = 98/190 (51%)
Frame = +2
Query: 23 EHNLLHDQVTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSFCQAGNME 202
+H + V+Y L++ L K+G+ EA + +E + + + YS ++H F + G
Sbjct: 408 KHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSS 467
Query: 203 RAKELVNEMFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNTVSYTALL 382
A +LV EM K P V ++ C KVD+AK+ ++Q +GC N V++T ++
Sbjct: 468 EACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVI 527
Query: 383 NGLCRSGKTSEAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSEMIQKGFY 562
+G C+ A +++ P+ +TY+ ++ ++G++ EA ++ +M++ G
Sbjct: 528 HGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLI 587
Query: 563 PTPVEINLLI 592
PTPV +I
Sbjct: 588 PTPVTYRTVI 597
Score = 98.2 bits (243), Expect = 1e-18
Identities = 54/180 (30%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
Frame = +2
Query: 56 NNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSFCQAGNMERAKELVNEMFL 235
N IHVL D+A+ FL + + + Y+ ++ +C +E A EL+ EM
Sbjct: 208 NTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPF 267
Query: 236 KRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYK-HGCKPNTVSYTALLNGLCRSGKTS 412
K C PD ++Y V+ C ++ + + L+++M K P+ V+Y ++ L + G
Sbjct: 268 KGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGD 327
Query: 413 EAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSEMIQKGFYPTPVEINLLI 592
EA E + +EE + + + YS ++H F REG++ +A E+V+EM KG P V +I
Sbjct: 328 EALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVI 387
Score = 94.7 bits (234), Expect = 1e-17
Identities = 48/180 (26%), Positives = 91/180 (50%)
Frame = +2
Query: 14 MTTEHNLLHDQVTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSFCQAG 193
M+ E + + +TY+ L+H + G EA +RE +GF V + ++ S CQ
Sbjct: 440 MSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEE 499
Query: 194 NMERAKELVNEMFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNTVSYT 373
++ AK + + C +VV +T V++GFC ++ A LL MY P+ V+YT
Sbjct: 500 KVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYT 559
Query: 374 ALLNGLCRSGKTSEAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSEMIQK 553
+++ L + G+ EA ++ P +TY V+H + R G++ + +++ +M+ +
Sbjct: 560 TIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR 619
Score = 84.3 bits (207), Expect = 1e-14
Identities = 48/186 (25%), Positives = 97/186 (52%), Gaps = 2/186 (1%)
Frame = +2
Query: 47 VTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSFCQAGNMERAKELVNE 226
V N LI L + DEA F+ + G ++ V ++ ++H FCQ ++E A L+++
Sbjct: 486 VEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDD 545
Query: 227 MFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNTVSYTALLNGLCRSGK 406
M+L PDVVTYT +++ G++++A +L +M + G P V+Y +++ CR G+
Sbjct: 546 MYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGR 605
Query: 407 TSEAREMMN--TSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSEMIQKGFYPTPVEI 580
+ +++ S ++ T Y+ V+ G L +A +++ ++++
Sbjct: 606 VEDLLKLLEKMLSRQECRT----AYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTC 661
Query: 581 NLLIQS 598
++LI+S
Sbjct: 662 HMLIES 667
Score = 55.8 bits (133), Expect = 5e-06
Identities = 39/186 (20%), Positives = 81/186 (43%), Gaps = 1/186 (0%)
Frame = +2
Query: 38 HDQVTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSFCQAGNMERAKEL 217
HD + Y ++ +LSK A LR + + ++ S+ +AG + A +
Sbjct: 132 HDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRV 191
Query: 218 VNEMFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNTVSYTALLNGLCR 397
+ M PD+ ++ ++D+A + L++M +PN ++Y L+ G C
Sbjct: 192 LTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCD 251
Query: 398 SGKTSEAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSEMIQ-KGFYPTPV 574
+ +A E++ +P+ I+Y VM +E ++ E ++ +M++ P V
Sbjct: 252 LHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQV 311
Query: 575 EINLLI 592
N +
Sbjct: 312 TYNTFV 317
>ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 321 bits (822), Expect = 7e-86
Identities = 148/199 (74%), Positives = 175/199 (87%)
Frame = +2
Query: 2 LLEKMTTEHNLLHDQVTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSF 181
L+EKM + NL+ DQVTYN LIH+LSKHGH D+AL+FL+EAE +GF IDKVGYSAIVHSF
Sbjct: 358 LMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSF 417
Query: 182 CQAGNMERAKELVNEMFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNT 361
CQ G M+ AK LV +M+ + C PDVVTYTA+V+GFC +G++D+AK++LQQMYKHGCKPNT
Sbjct: 418 CQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNT 477
Query: 362 VSYTALLNGLCRSGKTSEAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSE 541
VSYTALLNGLC SGK+ EAREM+N SEE WWTPNAITY VVMHGFRREGKLSEAC++ E
Sbjct: 478 VSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTRE 537
Query: 542 MIQKGFYPTPVEINLLIQS 598
M++KGF+PTPVEINLLIQS
Sbjct: 538 MVEKGFFPTPVEINLLIQS 556
Score = 97.8 bits (242), Expect = 1e-18
Identities = 52/190 (27%), Positives = 93/190 (48%)
Frame = +2
Query: 23 EHNLLHDQVTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSFCQAGNME 202
+H + V+Y L++ L G EA + +E + + + Y ++H F + G +
Sbjct: 470 KHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLS 529
Query: 203 RAKELVNEMFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNTVSYTALL 382
A +L EM K P V ++ C KV +AK+ L++ GC N V++T ++
Sbjct: 530 EACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVI 589
Query: 383 NGLCRSGKTSEAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSEMIQKGFY 562
+G C+ G A ++ P+A+TY+ + ++G+L EA E++ +M+ KG
Sbjct: 590 HGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLD 649
Query: 563 PTPVEINLLI 592
PTPV +I
Sbjct: 650 PTPVTFRSVI 659
Score = 97.8 bits (242), Expect = 1e-18
Identities = 51/180 (28%), Positives = 93/180 (51%)
Frame = +2
Query: 14 MTTEHNLLHDQVTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSFCQAG 193
++ EH + +TY ++H + G EA RE +GF V + ++ S CQ
Sbjct: 502 VSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQ 561
Query: 194 NMERAKELVNEMFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNTVSYT 373
+ AK+ + E K C +VV +T V++GFC IG ++ A +L+ MY P+ V+YT
Sbjct: 562 KVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYT 621
Query: 374 ALLNGLCRSGKTSEAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSEMIQK 553
AL + L + G+ EA E++ P +T+ V+H + + G++ + ++ M+++
Sbjct: 622 ALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKR 681
Score = 89.4 bits (220), Expect = 4e-16
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 1/198 (0%)
Frame = +2
Query: 2 LLEKMTTEHNLLHDQVTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSF 181
L++K E NL N I+VL K ++AL FL + G D V Y++++ +
Sbjct: 256 LMQKAGVEPNLS----ICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGY 311
Query: 182 CQAGNMERAKELVNEMFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYK-HGCKPN 358
C +E A EL+ + K C PD V+Y V+ C K++Q K L+++M + P+
Sbjct: 312 CDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPD 371
Query: 359 TVSYTALLNGLCRSGKTSEAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVS 538
V+Y L++ L + G +A + +E+ + + + YS ++H F ++G++ EA +V
Sbjct: 372 QVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVI 431
Query: 539 EMIQKGFYPTPVEINLLI 592
+M + P V ++
Sbjct: 432 DMYSRSCNPDVVTYTAIV 449
Score = 82.8 bits (203), Expect = 4e-14
Identities = 48/182 (26%), Positives = 93/182 (51%)
Frame = +2
Query: 5 LEKMTTEHNLLHDQVTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSFC 184
L + E V N LI L ++ EA +L E +G I+ V ++ ++H FC
Sbjct: 534 LTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFC 593
Query: 185 QAGNMERAKELVNEMFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNTV 364
Q G+ME A ++ +M+L PD VTYTA+ + G++D+A +L+ +M G P V
Sbjct: 594 QIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPV 653
Query: 365 SYTALLNGLCRSGKTSEAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSEM 544
++ ++++ C+ G+ + +++ + P Y+ V+ G L EA +++ ++
Sbjct: 654 TFRSVIHRYCQWGRVDDMLNLLDRMVKR--KPFRTIYNHVIEKLCDFGNLEEAEKLLGKV 711
Query: 545 IQ 550
++
Sbjct: 712 LR 713
Score = 75.9 bits (185), Expect = 5e-12
Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 36/223 (16%)
Frame = +2
Query: 38 HDQVTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSFCQAGNMERAKEL 217
H + Y L+ VLSK A LR +G + + ++ S+ +AG + A +
Sbjct: 194 HHPLVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRV 253
Query: 218 VNEM------------------------------FLKRCI-----PDVVTYTAVVNGFCC 292
+ M FL+R PD+VTY +++ G+C
Sbjct: 254 LTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCD 313
Query: 293 IGKVDQAKQLLQQMYKHGCKPNTVSYTALLNGLCRSGKTSEAREMMNTSEEDW-WTPNAI 469
+ +++ A +L+ + GC P+ VSY ++ LC+ K + + +M +D P+ +
Sbjct: 314 LNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQV 373
Query: 470 TYSVVMHGFRREGKLSEACEVVSEMIQKGFYPTPVEINLLIQS 598
TY+ ++H + G +A + E KGF+ V + ++ S
Sbjct: 374 TYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHS 416
>emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 321 bits (822), Expect = 7e-86
Identities = 151/199 (75%), Positives = 174/199 (87%)
Frame = +2
Query: 2 LLEKMTTEHNLLHDQVTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSF 181
L+EKM + NLL DQVTYN +H+LSKHGHGDEAL FLREAE + F +DKVGYSAIVHSF
Sbjct: 296 LMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSF 355
Query: 182 CQAGNMERAKELVNEMFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNT 361
C+ G M++AKE+VNEMF K CIPDVVTYT+V+NG C KVDQAK++L+QMYKHGCKPNT
Sbjct: 356 CREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNT 415
Query: 362 VSYTALLNGLCRSGKTSEAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSE 541
VSYTALLNGLC++G + EAREMMN SEE WW PNAITYSV+MHGFRREGK SEAC++V E
Sbjct: 416 VSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVRE 475
Query: 542 MIQKGFYPTPVEINLLIQS 598
MI+KGF+PTPVEINLLIQS
Sbjct: 476 MIKKGFFPTPVEINLLIQS 494
Score = 102 bits (255), Expect = 4e-20
Identities = 51/190 (26%), Positives = 99/190 (52%)
Frame = +2
Query: 23 EHNLLHDQVTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSFCQAGNME 202
+H + V+Y L++ L K+G+ EA + +E + + + YS ++H F + G
Sbjct: 408 KHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSS 467
Query: 203 RAKELVNEMFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNTVSYTALL 382
A +LV EM K P V ++ C KVD+AK+ ++Q +GC N V++T ++
Sbjct: 468 EACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVI 527
Query: 383 NGLCRSGKTSEAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSEMIQKGFY 562
+G C+ A +++ P+ +TY+ ++ ++G++ EA ++ +M++ G+
Sbjct: 528 HGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWI 587
Query: 563 PTPVEINLLI 592
PTPV +I
Sbjct: 588 PTPVTYRTVI 597
Score = 99.8 bits (247), Expect = 3e-19
Identities = 49/180 (27%), Positives = 92/180 (51%)
Frame = +2
Query: 14 MTTEHNLLHDQVTYNNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSFCQAG 193
M+ E + + +TY+ L+H + G EA +RE +GF V + ++ S CQ
Sbjct: 440 MSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEE 499
Query: 194 NMERAKELVNEMFLKRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYKHGCKPNTVSYT 373
++ AK + + C +VV +T V++GFC ++ A LL MY P+ V+YT
Sbjct: 500 KVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYT 559
Query: 374 ALLNGLCRSGKTSEAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSEMIQK 553
+++ L + G+ EA ++ W P +TY V+H + R G++ + +++ +M+ +
Sbjct: 560 TIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR 619
Score = 99.0 bits (245), Expect = 6e-19
Identities = 54/180 (30%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
Frame = +2
Query: 56 NNLIHVLSKHGHGDEALSFLREAEAQGFCIDKVGYSAIVHSFCQAGNMERAKELVNEMFL 235
N IHVL D+A+ FL + + + Y+ ++ +C +E A EL+ EM
Sbjct: 208 NTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPF 267
Query: 236 KRCIPDVVTYTAVVNGFCCIGKVDQAKQLLQQMYK-HGCKPNTVSYTALLNGLCRSGKTS 412
K C PD ++Y V+ C ++ + + L+++M K P+ V+Y ++ L + G
Sbjct: 268 KGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGD 327
Query: 413 EAREMMNTSEEDWWTPNAITYSVVMHGFRREGKLSEACEVVSEMIQKGFYPTPVEINLLI 592
EA E + +EE + + + YS ++H F REG++ +A E+V+EM KG P V +I
Sbjct: 328 EALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVI 387