BLASTX nr result

ID: Bupleurum21_contig00038864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038864
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         174   7e-42
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]   172   2e-41
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           170   1e-40
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]   167   1e-39
emb|CAN75724.1| hypothetical protein VITISV_040386 [Vitis vinifera]   165   3e-39

>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  174 bits (441), Expect = 7e-42
 Identities = 80/113 (70%), Positives = 96/113 (84%)
 Frame = +3

Query: 6   EALFTAVHVINMSPCASLDGDVPDKIWFGKESSYDHLRVFGCKAYVHVPNDERSKLDSKT 185
           EA+ TAVHVIN+SP  +L  +VPDK+W GK+ SYDHLRVFGCKA+VHVP DERSKLDSKT
Sbjct: 607 EAVSTAVHVINLSPVIALKNEVPDKVWCGKDVSYDHLRVFGCKAFVHVPRDERSKLDSKT 666

Query: 186 RQCIFVGYGQDQFGYRFYDPGEKKLIRSRDVVFVEDQTIEDMQKDDESKSHNN 344
           RQCIF+GYG D+FGYR YDP EKKL+RSRDVVF E+QTIED+ K  + +S ++
Sbjct: 667 RQCIFIGYGFDEFGYRLYDPVEKKLVRSRDVVFFENQTIEDIDKVKQPESRDS 719


>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
          Length = 1207

 Score =  172 bits (437), Expect = 2e-41
 Identities = 75/114 (65%), Positives = 96/114 (84%)
 Frame = +3

Query: 3   GEALFTAVHVINMSPCASLDGDVPDKIWFGKESSYDHLRVFGCKAYVHVPNDERSKLDSK 182
           GEAL T VHV+N++PC  L+ DVPD+IW   E SYDHLRVFGCKA+VH+P DERSKLD+K
Sbjct: 491 GEALNTVVHVLNLTPCVPLEFDVPDRIWSKNEISYDHLRVFGCKAFVHIPKDERSKLDAK 550

Query: 183 TRQCIFVGYGQDQFGYRFYDPGEKKLIRSRDVVFVEDQTIEDMQKDDESKSHNN 344
           TR C+F+GYGQD+ GYRFYDP +KKL+RSRDVVF+ED TI+D++K +  +S ++
Sbjct: 551 TRPCVFIGYGQDELGYRFYDPVQKKLVRSRDVVFMEDHTIQDIEKTNPMESQHS 604


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  170 bits (430), Expect = 1e-40
 Identities = 77/109 (70%), Positives = 90/109 (82%)
 Frame = +3

Query: 3   GEALFTAVHVINMSPCASLDGDVPDKIWFGKESSYDHLRVFGCKAYVHVPNDERSKLDSK 182
           GEAL TA +V+N SPC  L    P+KIW G++ SYD LRVFGCKAYVHVP DERSKLD K
Sbjct: 608 GEALVTAAYVLNHSPCVPLQYKAPEKIWLGRDISYDQLRVFGCKAYVHVPKDERSKLDVK 667

Query: 183 TRQCIFVGYGQDQFGYRFYDPGEKKLIRSRDVVFVEDQTIEDMQKDDES 329
           TR+C+F+GYGQD  GY+FYDP EKKL+RSRDVVFVEDQTIED+ K ++S
Sbjct: 668 TRECVFIGYGQDMLGYKFYDPVEKKLVRSRDVVFVEDQTIEDIDKVEKS 716


>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
          Length = 1317

 Score =  167 bits (422), Expect = 1e-39
 Identities = 73/113 (64%), Positives = 93/113 (82%)
 Frame = +3

Query: 6   EALFTAVHVINMSPCASLDGDVPDKIWFGKESSYDHLRVFGCKAYVHVPNDERSKLDSKT 185
           EAL T VHV+N++PC  L+ DV D+IW   E SYDHLRVFGCKA+VH+P DERSKLD KT
Sbjct: 560 EALNTVVHVLNLTPCVPLEFDVSDRIWSNNEISYDHLRVFGCKAFVHIPKDERSKLDVKT 619

Query: 186 RQCIFVGYGQDQFGYRFYDPGEKKLIRSRDVVFVEDQTIEDMQKDDESKSHNN 344
           R C+F+GYGQD+ GYRFYDP +KKL+RSRDVVF+ED TI+D++K +  +S ++
Sbjct: 620 RPCVFIGYGQDELGYRFYDPVQKKLVRSRDVVFMEDHTIQDIEKTNPMESQHS 672


>emb|CAN75724.1| hypothetical protein VITISV_040386 [Vitis vinifera]
          Length = 885

 Score =  165 bits (418), Expect = 3e-39
 Identities = 71/110 (64%), Positives = 92/110 (83%)
 Frame = +3

Query: 3   GEALFTAVHVINMSPCASLDGDVPDKIWFGKESSYDHLRVFGCKAYVHVPNDERSKLDSK 182
           GEAL T VHV+N++PC  L+ DVPD+IW   E SYD+LRVFGCKA+VH+P D+RSKLD+K
Sbjct: 398 GEALNTVVHVLNLTPCVPLEFDVPDRIWSNNEISYDYLRVFGCKAFVHIPKDKRSKLDAK 457

Query: 183 TRQCIFVGYGQDQFGYRFYDPGEKKLIRSRDVVFVEDQTIEDMQKDDESK 332
           TR C+F+GYGQD+ GYRFYD  +KKL+RSRD +F+ED TI+D++K D +K
Sbjct: 458 TRPCVFIGYGQDELGYRFYDQVQKKLVRSRDAMFMEDHTIQDIEKTDVTK 507


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