BLASTX nr result

ID: Bupleurum21_contig00038856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038856
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36833.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_002267274.1| PREDICTED: translocase of chloroplast 159, c...   140   1e-31
ref|XP_002516922.1| GTP binding protein, putative [Ricinus commu...   138   5e-31
ref|XP_002531885.1| protein translocase, putative [Ricinus commu...   136   2e-30
gb|AFW21568.1| hypothetical protein ZEAMMB73_384791 [Zea mays]        128   4e-28

>emb|CBI36833.3| unnamed protein product [Vitis vinifera]
          Length = 1015

 Score =  140 bits (353), Expect = 1e-31
 Identities = 67/105 (63%), Positives = 85/105 (80%)
 Frame = +3

Query: 3   KRAALAFEAENKKGSDLSLNILIIGKSGVGKSATINSIFGEERTKIDPFEPATKAVKEIL 182
           KR A+  EAE K   + SLNIL++GKSGVGKSATINSIFGE++  I+ FEPAT  V+EI+
Sbjct: 550 KRRAMQLEAEGKDDLNFSLNILVLGKSGVGKSATINSIFGEQKALINAFEPATTTVREII 609

Query: 183 GTINGIKVRVLDTPGLKTSLKDEHLNWKILKSIAKFTKRCPPDVV 317
           GTI+G+K+RV DTPGLK+S  ++ +N KIL SI KFTK+CPPD+V
Sbjct: 610 GTIDGVKIRVFDTPGLKSSFLEQGVNRKILSSIQKFTKKCPPDIV 654


>ref|XP_002267274.1| PREDICTED: translocase of chloroplast 159, chloroplastic-like [Vitis
            vinifera]
          Length = 1465

 Score =  140 bits (353), Expect = 1e-31
 Identities = 67/105 (63%), Positives = 85/105 (80%)
 Frame = +3

Query: 3    KRAALAFEAENKKGSDLSLNILIIGKSGVGKSATINSIFGEERTKIDPFEPATKAVKEIL 182
            KR A+  EAE K   + SLNIL++GKSGVGKSATINSIFGE++  I+ FEPAT  V+EI+
Sbjct: 803  KRRAMQLEAEGKDDLNFSLNILVLGKSGVGKSATINSIFGEQKALINAFEPATTTVREII 862

Query: 183  GTINGIKVRVLDTPGLKTSLKDEHLNWKILKSIAKFTKRCPPDVV 317
            GTI+G+K+RV DTPGLK+S  ++ +N KIL SI KFTK+CPPD+V
Sbjct: 863  GTIDGVKIRVFDTPGLKSSFLEQGVNRKILSSIQKFTKKCPPDIV 907


>ref|XP_002516922.1| GTP binding protein, putative [Ricinus communis]
            gi|223544010|gb|EEF45536.1| GTP binding protein, putative
            [Ricinus communis]
          Length = 1381

 Score =  138 bits (347), Expect = 5e-31
 Identities = 67/105 (63%), Positives = 84/105 (80%)
 Frame = +3

Query: 3    KRAALAFEAENKKGSDLSLNILIIGKSGVGKSATINSIFGEERTKIDPFEPATKAVKEIL 182
            KR A+  EAE K   D  LNIL+IGK+GVGKSAT+NSIFGE++  ID F+PAT  VKEI 
Sbjct: 734  KRMAMQLEAEGKDDLDFCLNILVIGKTGVGKSATVNSIFGEKKVMIDAFDPATTKVKEIF 793

Query: 183  GTINGIKVRVLDTPGLKTSLKDEHLNWKILKSIAKFTKRCPPDVV 317
            GTI+G+++R+LDTPGL+TS+K+E  N KIL+SI K TK+ PPDVV
Sbjct: 794  GTIDGVRIRILDTPGLRTSVKEEATNRKILESIKKLTKQFPPDVV 838


>ref|XP_002531885.1| protein translocase, putative [Ricinus communis]
           gi|223528493|gb|EEF30522.1| protein translocase,
           putative [Ricinus communis]
          Length = 1051

 Score =  136 bits (343), Expect = 2e-30
 Identities = 65/105 (61%), Positives = 84/105 (80%)
 Frame = +3

Query: 3   KRAALAFEAENKKGSDLSLNILIIGKSGVGKSATINSIFGEERTKIDPFEPATKAVKEIL 182
           KR AL  EAE K+  + SLNIL++GK+GVGKSATINSIFGEE++ I  FEPAT +VKEI 
Sbjct: 390 KRTALQLEAEGKEDLEFSLNILVLGKAGVGKSATINSIFGEEKSPIHAFEPATNSVKEIT 449

Query: 183 GTINGIKVRVLDTPGLKTSLKDEHLNWKILKSIAKFTKRCPPDVV 317
           G ++GIK+RV+D PGLK+S  ++ LN K+L S+ KF K+CPPD+V
Sbjct: 450 GLVDGIKIRVIDCPGLKSSGSEQGLNRKLLSSVKKFMKKCPPDIV 494


>gb|AFW21568.1| hypothetical protein ZEAMMB73_384791 [Zea mays]
          Length = 1356

 Score =  128 bits (322), Expect = 4e-28
 Identities = 57/105 (54%), Positives = 83/105 (79%)
 Frame = +3

Query: 3    KRAALAFEAENKKGSDLSLNILIIGKSGVGKSATINSIFGEERTKIDPFEPATKAVKEIL 182
            +R AL  EAE K+  + S NIL++GK+GVGKSATINS+FGEE++K D F  AT  V+EI+
Sbjct: 701  RRKALLLEAEGKEDLNFSCNILVLGKTGVGKSATINSVFGEEKSKTDAFSSATTNVREII 760

Query: 183  GTINGIKVRVLDTPGLKTSLKDEHLNWKILKSIAKFTKRCPPDVV 317
            G ++G+K+R++DTPGL+ ++ D+  N KIL ++ K+TK+CPPD+V
Sbjct: 761  GDVDGVKIRIIDTPGLRPNVMDQGSNRKILAAVKKYTKKCPPDIV 805


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