BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038849
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   123   1e-26
emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]   119   2e-25
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   116   2e-24
gb|AAM93462.1| putative reverse transcriptase [Oryza sativa Japo...   116   2e-24
gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japo...   116   2e-24

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  123 bits (309), Expect = 1e-26
 Identities = 64/145 (44%), Positives = 83/145 (57%)
 Frame = -3

Query: 472 PDSFIARLLKARYFSSCSFAQAGLGNNPSYVWRSIISAKQLVCDGSVIRIGKGEHVNVWQ 293
           PDS + R+ +ARYF + SF  A LG+NPSY+WRSI++A+ L+  G    I  G  V VW 
Sbjct: 345 PDSLVTRIFQARYFRNSSFLNAELGSNPSYMWRSILAAQGLLKRGCYWSIASGTKVQVWG 404

Query: 292 DPWLPNSNQPRITTPVIPGMQNTKVSNLMTDSCEWDLDILRDLFNDNDVQQILRIPLSQS 113
           D WLP+S+   I TP + G    KV  L+T+   W  D +RD F   D   IL IPL  S
Sbjct: 405 DSWLPDSSNRLIITPPVAGFDGIKVDELITEGL-WREDFIRDKFMARDADLILSIPLPMS 463

Query: 112 ADMDSWIWLEDEKGMYTVKSGYRKL 38
           +  D   W  D +G YT +SGY  L
Sbjct: 464 SREDQISWSFDARGEYTARSGYGAL 488


>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score =  119 bits (299), Expect = 2e-25
 Identities = 63/144 (43%), Positives = 82/144 (56%)
 Frame = -3

Query: 469  DSFIARLLKARYFSSCSFAQAGLGNNPSYVWRSIISAKQLVCDGSVIRIGKGEHVNVWQD 290
            DS + R+ +ARYF + SF  A LG+NPSY+WRSI++A+ L+  G    I  G  V VW D
Sbjct: 1076 DSLVTRIFQARYFINSSFLNAELGSNPSYMWRSILAAQDLLKRGYYWSIASGTKVQVWGD 1135

Query: 289  PWLPNSNQPRITTPVIPGMQNTKVSNLMTDSCEWDLDILRDLFNDNDVQQILRIPLSQSA 110
             WLP+++   I TP I G    KV  L+T+   W  D +RD F   D   IL IPL  S+
Sbjct: 1136 SWLPDNSNRLIITPPIAGFDEIKVDELITEGL-WREDFIRDKFMARDADLILYIPLPMSS 1194

Query: 109  DMDSWIWLEDEKGMYTVKSGYRKL 38
              D   W  D +G YT +SGY  L
Sbjct: 1195 REDQISWSFDARGEYTARSGYGAL 1218


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  116 bits (291), Expect = 2e-24
 Identities = 62/144 (43%), Positives = 79/144 (54%)
 Frame = -3

Query: 469  DSFIARLLKARYFSSCSFAQAGLGNNPSYVWRSIISAKQLVCDGSVIRIGKGEHVNVWQD 290
            DS +  + +ARYF + SF  A LG+NPSY+WRSI++A+ L+  G    I  G  V VW D
Sbjct: 1433 DSLVTIIFQARYFRNSSFLNAELGSNPSYMWRSILAAQDLLKMGCYWSIASGTKVQVWGD 1492

Query: 289  PWLPNSNQPRITTPVIPGMQNTKVSNLMTDSCEWDLDILRDLFNDNDVQQILRIPLSQSA 110
             WLPNS+   I TP +      KV  L+T    W  D +RD F   D   IL IPL  S+
Sbjct: 1493 SWLPNSSNRLIITPHVADFDGIKVDELITKGL-WHEDFIRDKFMGRDADLILSIPLPMSS 1551

Query: 109  DMDSWIWLEDEKGMYTVKSGYRKL 38
              D   W  D +G YT +SGY  L
Sbjct: 1552 REDQISWSFDARGEYTARSGYGAL 1575


>gb|AAM93462.1| putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 566

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/144 (40%), Positives = 86/144 (59%), Gaps = 1/144 (0%)
 Frame = -3

Query: 472 PDSFIARLLKARYFSSCSFAQAGLGNNPSYVWRSIISAKQLVCDGSVIRIGKGEHVNVWQ 293
           PDS  +RLLKA+YF +C+   A      SY WRSI+   QL+  G + R+G GEH+N+W 
Sbjct: 267 PDSLCSRLLKAKYFPNCNVLDAQSRKQMSYSWRSILKGIQLLRKGVIWRVGNGEHINIWS 326

Query: 292 DPWLPNSNQPRITTPVIPGMQNTKVSNLMTDSC-EWDLDILRDLFNDNDVQQILRIPLSQ 116
           DPWLP     R  T        T+V  L+  +  +WD+++++ +FN+ND + I RIPL +
Sbjct: 327 DPWLP--RDMRFVTTRRGASLITRVCELIDPTTGQWDIELIQQIFNENDAKIITRIPLRE 384

Query: 115 SADMDSWIWLEDEKGMYTVKSGYR 44
             + D   W  D KG+++VKS Y+
Sbjct: 385 GQE-DFIAWQPDTKGIFSVKSAYK 407


>gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japonica Group]
          Length = 697

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/144 (40%), Positives = 86/144 (59%), Gaps = 1/144 (0%)
 Frame = -3

Query: 472 PDSFIARLLKARYFSSCSFAQAGLGNNPSYVWRSIISAKQLVCDGSVIRIGKGEHVNVWQ 293
           PDS  +RLLKA+YF +C+   A      SY WRSI+   QL+  G + R+G GEH+N+W 
Sbjct: 398 PDSLCSRLLKAKYFPNCNVLDAQSRKQMSYSWRSILKGIQLLRKGVIWRVGNGEHINIWS 457

Query: 292 DPWLPNSNQPRITTPVIPGMQNTKVSNLMTDSC-EWDLDILRDLFNDNDVQQILRIPLSQ 116
           DPWLP     R  T        T+V  L+  +  +WD+++++ +FN+ND + I RIPL +
Sbjct: 458 DPWLP--RDMRFVTTRRGASLITRVCELIDPTTGQWDIELIQQIFNENDAKIITRIPLRE 515

Query: 115 SADMDSWIWLEDEKGMYTVKSGYR 44
             + D   W  D KG+++VKS Y+
Sbjct: 516 GQE-DFIAWQPDTKGIFSVKSAYK 538